Click here to switch to the map view.

The map label for this gene is osmY [H]

Identifier: 209398467

GI number: 209398467

Start: 5543066

End: 5543671

Strand: Direct

Name: osmY [H]

Synonym: ECH74115_5888

Alternate gene names: 209398467

Gene position: 5543066-5543671 (Clockwise)

Preceding gene: 209399061

Following gene: 209400823

Centisome position: 99.48

GC content: 50.66

Gene sequence:

>606_bases
ATGACTATGACAAGACTGAAGATTTCGAAAACTCTGCTGGCTGTAATGTTGACCTCTGCCGTCGCGACCGGCTCTGCCTA
CGCGGAAAACAACGCGCAGACTACCAATGAAAGCGCAGGGCAAAAAGTCGATAGCTCTATGAATAAAGTCGGTAATTTCA
TGGATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCGCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTC
AAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAA
AGGTGTTGAAGGGGTGACCTCTGTCAGCGACAAACTGCACGTTCGCGACGCTAAAGAAGGCTCTGTGAAGGGCTACGCGG
GTGACACCGCCACCACCAGTGAAATCAAAGCCAAATTGCTGGCGGACGATATCGTCCCTTCCCGTCATGTGAAAGTTGAA
ACCACCGATGGCGTGGTTCAGCTCTCTGGTATCGTAGATTCTCAGGCACAAAGTGACCGTGCTGAAAGTATCGCCAAAGC
GGTAGATGGTGTGAAAAGCGTTAAAAATGATCTGAAAACTAAGTAA

Upstream 100 bases:

>100_bases
CGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGC
AAACATACAGGAATAAATCG

Downstream 100 bases:

>100_bases
TTCGTCGTAATTCGTCCTCCCGAACTTTGTCGGGAGGCGCGATGTGCACCACACTAAAAATATCGCATTGAGTGATTTTC
ACGCTCATATCAAGCGGTGA

Product: periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISV
KTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVE
TTDGVVQLSGIVDSQAQSDRAESIAKAVDGVKSVKNDLKTK

Sequences:

>Translated_201_residues
MTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISV
KTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVE
TTDGVVQLSGIVDSQAQSDRAESIAKAVDGVKSVKNDLKTK
>Mature_200_residues
TMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISVK
TDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVET
TDGVVQLSGIVDSQAQSDRAESIAKAVDGVKSVKNDLKTK

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1790836, Length=201, Percent_Identity=99.5024875621891, Blast_Score=391, Evalue=1e-110,

Paralogues:

None

Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 21086; Mature: 20955

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAIT
CCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH
AKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLH
HHHHHHHHCCCCCCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHE
VRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVETTDGVVQLSGIVDSQAQSDR
ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECHHCCHHHHHH
AESIAKAVDGVKSVKNDLKTK
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAIT
CCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH
AKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLH
HHHHHHHHCCCCCCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHE
VRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVETTDGVVQLSGIVDSQAQSDR
ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECHHCCHHHHHH
AESIAKAVDGVKSVKNDLKTK
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]