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The map label for this gene is yqcA

Identifier: 209397840

GI number: 209397840

Start: 3749332

End: 3749781

Strand: Reverse

Name: yqcA

Synonym: ECH74115_4053

Alternate gene names: 209397840

Gene position: 3749781-3749332 (Counterclockwise)

Preceding gene: 209397015

Following gene: 209398965

Centisome position: 67.3

GC content: 52.44

Gene sequence:

>450_bases
ATGGCGGAAATTGGTATTTTTGTCGGCACCATGTACGGAAATTCGCTGTTAGTGGCGGAAGAAGCAGAAGCAATTCTGAC
CGCACAGGGCCACAAAGCAACGGTATTTGAAGATCCTGAATTAAGCGACTGGCTGCCCTATCAGGATAAGTATGTTCTGG
TGGTTACGTCCACGACCGGGCAGGGCGACCTTCCTGATAGCATTGTGCCGCTCTTTCAGGGAATCAAAGATAGTCTGGGC
TTCCAGCCGAATCTGCGTTATGGCGTGATTGCGCTCGGCGACAGTAGTTATGTGAATTTCTGCAATGGCGGCAAACAGTT
CGATGCCTTGCTGCAGGAACAGAGCGCTCAGCGGGTTGGCGAAATGCTGTTGATTGACGCCAGTGAGAACCCGGAACCGG
AAACGGAATCAAATCCGTGGGTCGAACAGTGGGGCACGCTGTTGTCCTGA

Upstream 100 bases:

>100_bases
TTGGCTGGCGCGGTCTGCTTCCTGAAAATGAAAGGGTTGAGTTCAGTGCGCCATCGGGTCAGGATGGAGAGAGAAGTTCC
TAATCCAGGGAGAAAACGGT

Downstream 100 bases:

>100_bases
TATGTTCAGCGAGCGGTAAATGTCGTTTTAGCGGTGCTGAATCGAATCTTTTCAGGCAAATGCCAGTAAAAACTGCTTCA
TAGCGCGGATTTTTACTGGC

Product: flavodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLG
FQPNLRYGVIALGDSSYVNFCNGGKQFDALLQEQSAQRVGEMLLIDASENPEPETESNPWVEQWGTLLS

Sequences:

>Translated_149_residues
MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLG
FQPNLRYGVIALGDSSYVNFCNGGKQFDALLQEQSAQRVGEMLLIDASENPEPETESNPWVEQWGTLLS
>Mature_148_residues
AEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLGF
QPNLRYGVIALGDSSYVNFCNGGKQFDALLQEQSAQRVGEMLLIDASENPEPETESNPWVEQWGTLLS

Specific function: Probable electron transporter

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain

Homologues:

Organism=Escherichia coli, GI1789154, Length=149, Percent_Identity=100, Blast_Score=305, Evalue=1e-84,
Organism=Escherichia coli, GI1790181, Length=149, Percent_Identity=30.2013422818792, Blast_Score=76, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQCA_ECO57 (P65368)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   B91085
- PIR:   D85930
- RefSeq:   NP_289345.1
- RefSeq:   NP_311677.1
- ProteinModelPortal:   P65368
- SMR:   P65368
- EnsemblBacteria:   EBESCT00000027261
- EnsemblBacteria:   EBESCT00000060309
- GeneID:   916549
- GeneID:   958259
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z4106
- KEGG:   ecs:ECs3650
- GeneTree:   EBGT00050000009974
- HOGENOM:   HBG686708
- OMA:   DSSYETF
- ProtClustDB:   PRK08105
- BioCyc:   ECOL83334:ECS3650-MONOMER
- GO:   GO:0006810
- InterPro:   IPR001094
- InterPro:   IPR008254
- PRINTS:   PR00369

Pfam domain/function: PF00258 Flavodoxin_1

EC number: NA

Molecular weight: Translated: 16274; Mature: 16143

Theoretical pI: Translated: 3.72; Mature: 3.72

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTG
CCCEEEEEEEECCCEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEECCC
QGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCNGGKQFDALLQEQSAQRVG
CCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHC
EMLLIDASENPEPETESNPWVEQWGTLLS
CEEEEECCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
AEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTG
CCEEEEEEEECCCEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEECCC
QGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCNGGKQFDALLQEQSAQRVG
CCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHC
EMLLIDASENPEPETESNPWVEQWGTLLS
CEEEEECCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796