Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
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Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is fabZ [H]
Identifier: 209397474
GI number: 209397474
Start: 1298890
End: 1299438
Strand: Direct
Name: fabZ [H]
Synonym: ECH74115_1285
Alternate gene names: 209397474
Gene position: 1298890-1299438 (Clockwise)
Preceding gene: 209396825
Following gene: 209400702
Centisome position: 23.31
GC content: 48.27
Gene sequence:
>549_bases ATGTCTAAATACACGATTCCTTCGAAAATCTTCCTCGAAATGGGCGGCTGGCGTCAGCCGCTGCTGATGGTCGATAAAAT TGCAGATTATAAATACGGTGAAAATGGCTTTGTCAGTGTCGTGAAACACGTCACCTATAACGAACCGTATCTACTGGGGC ATTTCCCGGAAGATCCGATTATGCCCGGGGTGATTATTTCGGAAATCTTCGGCCAGGCCAGCGAGTATCTCTCTTTCCTG ACCGACATTTGCGATATCTGGCGCGAACGTTTTGAGGAAGAGCTGAAGTCGTTACGTGATATTCACGCACGCATTCACCG CCCTGAAATGCTGGAGATTATCCGTACCCGGCGCAGCCAGGTACGCGGCGTGCTGGCGGCTCAGAACCTGAAATTTAAAG ATATCGCCTATCCGGGTGATTCTATTGATGTTGTCAGCAAATTGGCTTTTTCGGATGCCAGTGGCTTTAAACACTATTCC GTGACCGCGTACGTCGGTAAAAAGCTGATTAGTCAGGGCACCATTATCAATTTCCGTGAAACCAAGTAA
Upstream 100 bases:
>100_bases AGAAGTGGCGAACACCATCGTCTTCTTAAGTTCCTCTGCCTCCAGCTACATTGTCGGCCAGACCATCGTTATCGATGGCG GCCTGGTCATGCGGTGATTT
Downstream 100 bases:
>100_bases TCCAATAAGAGAGTAAATATTATGTCTACCATGAATGACGCTATTGAACAGCGTAAAGAAGTTCTGATGACCATTAAAAC TGAGATCATCCAGCGACTGA
Product: hypothetical protein
Products: trans-Delta2-enoyl-acyl-ACP; H2O [C]
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSKYTIPSKIFLEMGGWRQPLLMVDKIADYKYGENGFVSVVKHVTYNEPYLLGHFPEDPIMPGVIISEIFGQASEYLSFL TDICDIWRERFEEELKSLRDIHARIHRPEMLEIIRTRRSQVRGVLAAQNLKFKDIAYPGDSIDVVSKLAFSDASGFKHYS VTAYVGKKLISQGTIINFRETK
Sequences:
>Translated_182_residues MSKYTIPSKIFLEMGGWRQPLLMVDKIADYKYGENGFVSVVKHVTYNEPYLLGHFPEDPIMPGVIISEIFGQASEYLSFL TDICDIWRERFEEELKSLRDIHARIHRPEMLEIIRTRRSQVRGVLAAQNLKFKDIAYPGDSIDVVSKLAFSDASGFKHYS VTAYVGKKLISQGTIINFRETK >Mature_181_residues SKYTIPSKIFLEMGGWRQPLLMVDKIADYKYGENGFVSVVKHVTYNEPYLLGHFPEDPIMPGVIISEIFGQASEYLSFLT DICDIWRERFEEELKSLRDIHARIHRPEMLEIIRTRRSQVRGVLAAQNLKFKDIAYPGDSIDVVSKLAFSDASGFKHYSV TAYVGKKLISQGTIINFRETK
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=78, Percent_Identity=41.025641025641, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.- [C]
Molecular weight: Translated: 20925; Mature: 20794
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKYTIPSKIFLEMGGWRQPLLMVDKIADYKYGENGFVSVVKHVTYNEPYLLGHFPEDPI CCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCC MPGVIISEIFGQASEYLSFLTDICDIWRERFEEELKSLRDIHARIHRPEMLEIIRTRRSQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VRGVLAAQNLKFKDIAYPGDSIDVVSKLAFSDASGFKHYSVTAYVGKKLISQGTIINFRE HHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCEEEEEC TK CC >Mature Secondary Structure SKYTIPSKIFLEMGGWRQPLLMVDKIADYKYGENGFVSVVKHVTYNEPYLLGHFPEDPI CCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCC MPGVIISEIFGQASEYLSFLTDICDIWRERFEEELKSLRDIHARIHRPEMLEIIRTRRSQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VRGVLAAQNLKFKDIAYPGDSIDVVSKLAFSDASGFKHYSVTAYVGKKLISQGTIINFRE HHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCEEEEEC TK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-3-hydroxy-acyl-ACP [C]
Specific reaction: D-3-hydroxy-acyl-ACP = trans-Delta2-enoyl-acyl-ACP + H2O [C]
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA