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The map label for this gene is yqaA [H]

Identifier: 209396879

GI number: 209396879

Start: 3644906

End: 3645334

Strand: Reverse

Name: yqaA [H]

Synonym: ECH74115_3935

Alternate gene names: 209396879

Gene position: 3645334-3644906 (Counterclockwise)

Preceding gene: 209396302

Following gene: 209397887

Centisome position: 65.42

GC content: 49.65

Gene sequence:

>429_bases
GTGAGTGAAGCGTTATCGCTTTTCTCGTTGTTTGCCAGTAGTTTTCTCAGCGCTACACTATTACCCGGCAACTCCGAAGT
CGTGCTGGTGGCAATGTTGCTTTCTGGGATCAGTCATCCCTGGGTTTTAGTTTTAACAGCAACAATGGGTAATAGCCTTG
GAGGGTTAACTAACGTTATCCTTGGGCGTTTCTGTCCATTGCGTAAAACATCGCGCTGGCAAGAGAAAGCTACCGGCTGG
CTGAAACGCTATGGTGCAGTCACGCTATTATTAAGCTGGATGCCCGTGGTTGGCGATTTACTGTGTCTGTTAGCGGGATG
GATGCGCATCTCCTGGGGGCCGGTAATCTTTTTTTTGTGCCTTGGTAAAGCGTTACGCTATGTTGCAGTTGCAGCAGCGA
CCGTTCAGGGCATGATGTGGTGGCACTAA

Upstream 100 bases:

>100_bases
TGGGCGTGCAACCGACGCAGTGTGTGGTCTTTGAAGATGCCGATTTCGGTATTCAGGCGGCCCGTGCAGCAGGCATGGAC
GCTGTGGATGTTCGCTTGCT

Downstream 100 bases:

>100_bases
TTGTAGGCCTGCACATATGGTCACCATTACAGTTATGCTAATTAAAACGATTTTGACAGGCGGGAGGTCAATTTGATCCC
GGACGTATCACAGGCGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSEALSLFSLFASSFLSATLLPGNSEVVLVAMLLSGISHPWVLVLTATMGNSLGGLTNVILGRFCPLRKTSRWQEKATGW
LKRYGAVTLLLSWMPVVGDLLCLLAGWMRISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH

Sequences:

>Translated_142_residues
MSEALSLFSLFASSFLSATLLPGNSEVVLVAMLLSGISHPWVLVLTATMGNSLGGLTNVILGRFCPLRKTSRWQEKATGW
LKRYGAVTLLLSWMPVVGDLLCLLAGWMRISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH
>Mature_141_residues
SEALSLFSLFASSFLSATLLPGNSEVVLVAMLLSGISHPWVLVLTATMGNSLGGLTNVILGRFCPLRKTSRWQEKATGWL
KRYGAVTLLLSWMPVVGDLLCLLAGWMRISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=142, Percent_Identity=99.2957746478873, Blast_Score=276, Evalue=4e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 15546; Mature: 15415

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEALSLFSLFASSFLSATLLPGNSEVVLVAMLLSGISHPWVLVLTATMGNSLGGLTNVI
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHEEEHHHHCCCCHHHHHHH
LGRFCPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLCLLAGWMRISWGPVIFFLC
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGKALRYVAVAAATVQGMMWWH
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEALSLFSLFASSFLSATLLPGNSEVVLVAMLLSGISHPWVLVLTATMGNSLGGLTNVI
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHEEEHHHHCCCCHHHHHHH
LGRFCPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLCLLAGWMRISWGPVIFFLC
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGKALRYVAVAAATVQGMMWWH
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]