Click here to switch to the map view.

The map label for this gene is ybhP [H]

Identifier: 209396778

GI number: 209396778

Start: 949468

End: 950229

Strand: Reverse

Name: ybhP [H]

Synonym: ECH74115_0938

Alternate gene names: 209396778

Gene position: 950229-949468 (Counterclockwise)

Preceding gene: 209400178

Following gene: 209400411

Centisome position: 17.05

GC content: 55.25

Gene sequence:

>762_bases
ATGCCCGATCAAACACAACAATTTTCGTTCAAGGTGCTCACCATCAATATTCACAAAGGCTTTACCGCGTTTAACCGACG
CTTCATTTTGCCGGAACTTCGCGATGCCGTGCGTACCGTCAGCGCCGATATTGTTTGCCTGCAGGAAGTGATGGGCGCGC
ACGAAGTTCATCCGCTGCATGTGGAAAACTGGCCCGATACCTCGCACTACGAGTTTCTCGCCGACACTATGTGGAGCGAT
TTTGCCTACGGTCGCAATGCCGTATACCCGGAAGGGCATCACGGCAACGCCGTACTGTCGCGTTATCCCATTGAACATTA
TGAGAATCGCGATGTTTCGGTCGATGGTGCGGAAAAGCGCGGCGTGCTCTACTGCCGCATTGTGCCGCCGATGACCGGAA
AAGCGATTCATGTGATGTGCGTACATCTGGGCCTGCGTGAGGCGCACCGTCAGGCGCAGCTTGCGATGCTCGCCGAATGG
GTGAATGAGCTACCGGACGGCGAACCGGTATTGGTGGCGGGTGATTTCAATGACTGGCGGCAAAAAGCTAATCATCCGTT
AAAAGTGCAGGCCGGACTGGATGAGATTTTTACCCGCGCCCACGGACGCCCGGCGCGCACGTTTCCGGTGCAATTTCCTC
TACTACGACTGGACAGGATCTACGTCAAAAATACCAGCGCCAGCGCGCCAACCGCGTTGCCGCTGCGGACATGGCGACAC
CTTTCTGATCATGCCCCTTTAAGTGCGGAGATTCATTTATGA

Upstream 100 bases:

>100_bases
CTCAGAGTACCGAACTTTACGGAAAATTCCGTAAGACCGCACCTTTTTGTGACGCCGACTACACTATTTCAATGAGATAA
GAGGCAAAGACAGGAAAATT

Downstream 100 bases:

>100_bases
AATGTAGCTGGCGCGAAGGCAATAAGATCCAGTTGCTGGAAAACGGCGAGCAATATTATCCCGCGGTGTTTAAGGCGATT
GGCGAGGCACAAGAACGCAT

Product: endonuclease/exonuclease/phosphatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MPDQTQQFSFKVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEVMGAHEVHPLHVENWPDTSHYEFLADTMWSD
FAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLREAHRQAQLAMLAEW
VNELPDGEPVLVAGDFNDWRQKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNTSASAPTALPLRTWRH
LSDHAPLSAEIHL

Sequences:

>Translated_253_residues
MPDQTQQFSFKVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEVMGAHEVHPLHVENWPDTSHYEFLADTMWSD
FAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLREAHRQAQLAMLAEW
VNELPDGEPVLVAGDFNDWRQKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNTSASAPTALPLRTWRH
LSDHAPLSAEIHL
>Mature_252_residues
PDQTQQFSFKVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEVMGAHEVHPLHVENWPDTSHYEFLADTMWSDF
AYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLREAHRQAQLAMLAEWV
NELPDGEPVLVAGDFNDWRQKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNTSASAPTALPLRTWRHL
SDHAPLSAEIHL

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=253, Percent_Identity=99.604743083004, Blast_Score=526, Evalue=1e-151,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 28820; Mature: 28689

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDQTQQFSFKVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEVMGAHEVHPLH
CCCCCCEEEEEEEEEEEECCCHHHCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKR
ECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCCCCCCC
GVLYCRIVPPMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWR
CEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHH
QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNTSASAPTALPLRTWRH
HHCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCHHHHHHH
LSDHAPLSAEIHL
HHCCCCCEEEEEC
>Mature Secondary Structure 
PDQTQQFSFKVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEVMGAHEVHPLH
CCCCCEEEEEEEEEEEECCCHHHCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKR
ECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCCCCCCC
GVLYCRIVPPMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWR
CEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHH
QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNTSASAPTALPLRTWRH
HHCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCHHHHHHH
LSDHAPLSAEIHL
HHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]