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The map label for this gene is ycgV [H]

Identifier: 209396595

GI number: 209396595

Start: 1622095

End: 1623255

Strand: Reverse

Name: ycgV [H]

Synonym: ECH74115_1682

Alternate gene names: 209396595

Gene position: 1623255-1622095 (Counterclockwise)

Preceding gene: 209398838

Following gene: 209398957

Centisome position: 29.13

GC content: 48.49

Gene sequence:

>1161_bases
ATGGGCATCAAACAACACAATGGGAATACCAAAGCCGATCGTCTCGCTGAATTAAAAATCCGTTCGCCCTCAATTCAACT
GATAAAATTTGGCGCTATTGGTTTGAATGCAATTCTCTTTTCCCCCCTGCTGATAGCTGCTGATACAGGAAGTCAATATG
GCACCAATATTACTATTAATGATGGTGACAGAATTACTGGAGATACCGCCGATCCATCAGGAAACCTCTATGGTGTAATG
ACCCCAGCAGGAAACACGCCTGGCAATATCAACCTGGGTAATGATGTCACCGTCAATGTCAACGACGCCTCTGGATATGC
AAAAGGAATCATTATTCAGGGCAAAAACAGCTCCCTGACAGCTAACCGACTCACAGTAGATGTTGTTGGTCAAACCTCTG
CCATCGGCATTAATTTAATTGGTGACTATACCCATGCTGACTTAGGCACAGGCAGCACCATTAAGAGTAACGATGACGGC
ATCATTATTGGGCATAGCTCAACACTAACAGCCACTCAATTCACCATTGAAAACTCGAACGGTATAGGCCTAACCATCAA
TGACTATGGCACCAGTGTCGATCTTGGAAGCGGAAGTAAAATCAAGACCGATGGAAGTACAGGTGTTTATATCGGTGGTC
TCAACGGCAATAACGCCAATGGTGCTGCGCGTTTTACGGCGACAGACCTGACAATCGATGTTCAGGGCTACAGCGCCATG
GGGATAAACGTACAGAAAAACTCTGTTGTCGATCTCGGAACAAACAGTTCCATTAAAACCAGTGGCGATAATGCACACGG
CCTCTGGAGCTTTGGCCAGGTTAGCGCGAATGCACTCACTGTTGATGTAACTGGAGCCGCGGCCAATGGCGTCGAAGTTC
GTGGTGGTACAACCACTATCGGTGCAGATAGCCATATTTCTTCCGCGCAGGGCGGTGGTCTCGTCACCAGTGGTTCAGAC
GCGACAATCAATTTTTCTGGCACGGCAGCGCAACGAAACAGCATCTTTTCCGGCGGTTCTTATGGTGCCTCGGCCCAGAC
GGCAACGGCTGTTATCAACATGCAAAATACCGATATTACGGTTGATCGTAATGGCAGTCTGGCGCTGGGTTTGTGGGCGC
TCAGCGGCGCAAGAATGAAACCATCACCACTCCCCGTCTGA

Upstream 100 bases:

>100_bases
CACCATACAAATATCATGATGATAAGAGGATATTATTCATTGACTTAAACAAAATGACAAAATCCATAGACCCATAGCCT
GGGTACTATATAGGAGTGGT

Downstream 100 bases:

>100_bases
GCTTCCGTTTTCTTAACGTCAGCCCGACGGTGGAGCGGCAATTACAGCGGATTATTTTCTCTCTCGAGCGGGAAGCCCGG
GAGAAAGCGGACAAAGTACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MGIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAILFSPLLIAADTGSQYGTNITINDGDRITGDTADPSGNLYGVM
TPAGNTPGNINLGNDVTVNVNDASGYAKGIIIQGKNSSLTANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDG
IIIGHSSTLTATQFTIENSNGIGLTINDYGTSVDLGSGSKIKTDGSTGVYIGGLNGNNANGAARFTATDLTIDVQGYSAM
GINVQKNSVVDLGTNSSIKTSGDNAHGLWSFGQVSANALTVDVTGAAANGVEVRGGTTTIGADSHISSAQGGGLVTSGSD
ATINFSGTAAQRNSIFSGGSYGASAQTATAVINMQNTDITVDRNGSLALGLWALSGARMKPSPLPV

Sequences:

>Translated_386_residues
MGIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAILFSPLLIAADTGSQYGTNITINDGDRITGDTADPSGNLYGVM
TPAGNTPGNINLGNDVTVNVNDASGYAKGIIIQGKNSSLTANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDG
IIIGHSSTLTATQFTIENSNGIGLTINDYGTSVDLGSGSKIKTDGSTGVYIGGLNGNNANGAARFTATDLTIDVQGYSAM
GINVQKNSVVDLGTNSSIKTSGDNAHGLWSFGQVSANALTVDVTGAAANGVEVRGGTTTIGADSHISSAQGGGLVTSGSD
ATINFSGTAAQRNSIFSGGSYGASAQTATAVINMQNTDITVDRNGSLALGLWALSGARMKPSPLPV
>Mature_385_residues
GIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAILFSPLLIAADTGSQYGTNITINDGDRITGDTADPSGNLYGVMT
PAGNTPGNINLGNDVTVNVNDASGYAKGIIIQGKNSSLTANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDGI
IIGHSSTLTATQFTIENSNGIGLTINDYGTSVDLGSGSKIKTDGSTGVYIGGLNGNNANGAARFTATDLTIDVQGYSAMG
INVQKNSVVDLGTNSSIKTSGDNAHGLWSFGQVSANALTVDVTGAAANGVEVRGGTTTIGADSHISSAQGGGLVTSGSDA
TINFSGTAAQRNSIFSGGSYGASAQTATAVINMQNTDITVDRNGSLALGLWALSGARMKPSPLPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

Organism=Escherichia coli, GI1787452, Length=386, Percent_Identity=96.1139896373057, Blast_Score=695, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR006315
- InterPro:   IPR012332
- InterPro:   IPR011050
- InterPro:   IPR004899
- InterPro:   IPR003991 [H]

Pfam domain/function: PF03797 Autotransporter; PF03212 Pertactin [H]

EC number: NA

Molecular weight: Translated: 38973; Mature: 38842

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAILFSPLLIAADTGSQYGTNITIN
CCCCCCCCCCHHHEEEEEEEECCCEEEEEEECCCHHHHHHCCEEEEEECCCCCCCEEEEC
DGDRITGDTADPSGNLYGVMTPAGNTPGNINLGNDVTVNVNDASGYAKGIIIQGKNSSLT
CCCEEECCCCCCCCCEEEEEECCCCCCCCEECCCEEEEEEECCCCCEEEEEEECCCCCEE
ANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDGIIIGHSSTLTATQFTIENSN
EEEEEEEEECCCEEEEEEEEECCEECCCCCCCEEECCCCEEEEECCCCEEEEEEEEECCC
GIGLTINDYGTSVDLGSGSKIKTDGSTGVYIGGLNGNNANGAARFTATDLTIDVQGYSAM
CEEEEECCCCCEEECCCCCEEEECCCCEEEEECCCCCCCCCEEEEEEEEEEEEECCCEEE
GINVQKNSVVDLGTNSSIKTSGDNAHGLWSFGQVSANALTVDVTGAAANGVEVRGGTTTI
EEEEECCCEEEECCCCCEEECCCCCCEEEEECEECCCEEEEEEECCCCCCEEECCCEEEE
GADSHISSAQGGGLVTSGSDATINFSGTAAQRNSIFSGGSYGASAQTATAVINMQNTDIT
CCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCEECCCCCCCCCCEEEEEEEECCCEEE
VDRNGSLALGLWALSGARMKPSPLPV
EECCCCEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
GIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAILFSPLLIAADTGSQYGTNITIN
CCCCCCCCCHHHEEEEEEEECCCEEEEEEECCCHHHHHHCCEEEEEECCCCCCCEEEEC
DGDRITGDTADPSGNLYGVMTPAGNTPGNINLGNDVTVNVNDASGYAKGIIIQGKNSSLT
CCCEEECCCCCCCCCEEEEEECCCCCCCCEECCCEEEEEEECCCCCEEEEEEECCCCCEE
ANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDGIIIGHSSTLTATQFTIENSN
EEEEEEEEECCCEEEEEEEEECCEECCCCCCCEEECCCCEEEEECCCCEEEEEEEEECCC
GIGLTINDYGTSVDLGSGSKIKTDGSTGVYIGGLNGNNANGAARFTATDLTIDVQGYSAM
CEEEEECCCCCEEECCCCCEEEECCCCEEEEECCCCCCCCCEEEEEEEEEEEEECCCEEE
GINVQKNSVVDLGTNSSIKTSGDNAHGLWSFGQVSANALTVDVTGAAANGVEVRGGTTTI
EEEEECCCEEEECCCCCEEECCCCCCEEEEECEECCCEEEEEEECCCCCCEEECCCEEEE
GADSHISSAQGGGLVTSGSDATINFSGTAAQRNSIFSGGSYGASAQTATAVINMQNTDIT
CCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCEECCCCCCCCCCEEEEEEEECCCEEE
VDRNGSLALGLWALSGARMKPSPLPV
EECCCCEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 8905232 [H]