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The map label for this gene is yjeM [H]

Identifier: 209396517

GI number: 209396517

Start: 5313277

End: 5314821

Strand: Direct

Name: yjeM [H]

Synonym: ECH74115_5674

Alternate gene names: 209396517

Gene position: 5313277-5314821 (Clockwise)

Preceding gene: 209395929

Following gene: 209398620

Centisome position: 95.36

GC content: 47.31

Gene sequence:

>1545_bases
GTGGGCGCGTTTTATACACGCGCTGAAATGAAGGATGGTTTCATGCCTCACACGATAAAAAAGATGAGTCTGATAGGACT
CATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTC
CCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTGCTTATCGCAAA
GAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTC
CTCTTATATCATCTGGATGGTGAGCACCTCCGCGAAAGTTTGGGTACCGTTCTCAACATTCCTCTATGGTAGCGACATGA
CCCAGCACTGGCGTATTGCCGGACTGGAGCCTACGCAGGTGGTTGGTCTGCTGGCAGTGGCATGGATGATTCTGGTCACC
GTCGTTGCTTCAAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGT
ATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGA
ACCCAGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCTATTTTTGCCTATGGCGGAATTGAAGCGGTT
GGTGGTCTGGTCGATAAAACGGAAAATCCAGAAAAGAACTTTGCCAAAGGTATTGTTTTTGCCGCTATTGTTATTTCAAT
CGGTTATTCGCTGGCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCG
GCAATATTACCTATGTGCTGATGAAGAGCCTCGGGGTGACGCTGGGTAACGCACTGCATTTGTCACCTGAAGCGTCATTG
TCGCTGGGCGTATGGTTTGCGCGTATTACCGGACTTTCGATGTTCCTCGCTTATACCGGTGCGTTCTTTACGCTTTGCTA
TTCACCGCTGAAAGCCATCATCCAGGGGACGCCGAAAGCGTTGTGGCCGGAACCGATGACGCGCCTGAATGCGATGGGGA
TGCCGTCTATCGCTATGTGGATGCAGTGCGGGTTGGTTACTGTCTTCATCCTGCTGGTTTCGTTTGGTGGCGGTACCGCA
TCGGCGTTCTTTAACAAGCTGACGCTGATGGCGAACGTGTCTATGACGCTTCCTTACCTGTTCCTCGCGCTGGCTTTCCC
ATTCTTTAAAGCACGTCAGGATCTCGACAGACCATTTGTGATTTTCAAAACGCGTATGTCGGCAATGATTGCGACGGTGG
TTGTCGTTCTGGTGGTGACATTTGCGAACGTCTTCACCATTATTCAGCCTGTGGTTGAAGCCGGAGACTGGGACAGCACA
TTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGTCGCATGGCGAA
TAAACCTGAGTTAGCTCTCGACTGA

Upstream 100 bases:

>100_bases
GCTAAAGGCCACAATTTAAGACTGGATATTTGATATCATCCAGGTATCAATTCTGTATTGGTTTTTACGCTGCCCGCTCA
ATGTTGGGCAGTGCAGTTCA

Downstream 100 bases:

>100_bases
TCATATGAAATCCTGCAACTCATCGTCTCTCCGGCGATGAGTTGTCAGGAAGTAATGCGTATGGATGATACTCTCCAGGG
CCGGTGATAACTGAAGATGA

Product: amino acid permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 513

Protein sequence:

>514_residues
MGAFYTRAEMKDGFMPHTIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIFSALLFFIPFALMMAEMGAAYRK
EEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLYGSDMTQHWRIAGLEPTQVVGLLAVAWMILVT
VVASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAV
GGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVLMKSLGVTLGNALHLSPEASL
SLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTA
SAFFNKLTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDST
LWMIGGPVFFSLLAMAIYQNYCSRMANKPELALD

Sequences:

>Translated_514_residues
MGAFYTRAEMKDGFMPHTIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIFSALLFFIPFALMMAEMGAAYRK
EEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLYGSDMTQHWRIAGLEPTQVVGLLAVAWMILVT
VVASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAV
GGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVLMKSLGVTLGNALHLSPEASL
SLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTA
SAFFNKLTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDST
LWMIGGPVFFSLLAMAIYQNYCSRMANKPELALD
>Mature_513_residues
GAFYTRAEMKDGFMPHTIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIFSALLFFIPFALMMAEMGAAYRKE
EGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLYGSDMTQHWRIAGLEPTQVVGLLAVAWMILVTV
VASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAVG
GLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVLMKSLGVTLGNALHLSPEASLS
LGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTAS
AFFNKLTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDSTL
WMIGGPVFFSLLAMAIYQNYCSRMANKPELALD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87082380, Length=500, Percent_Identity=98, Blast_Score=984, Evalue=0.0,
Organism=Escherichia coli, GI87081798, Length=463, Percent_Identity=22.4622030237581, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI48994921, Length=463, Percent_Identity=24.622030237581, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1787768, Length=471, Percent_Identity=23.7791932059448, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 56297; Mature: 56165

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAFYTRAEMKDGFMPHTIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIFSA
CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHH
LLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKV
HHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCEE
WVPFSTFLYGSDMTQHWRIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARITAVGGIA
EECHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAV
HHHHHHHHHHHHHHHHHHCCCCHHHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
GGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHH
MKSLGVTLGNALHLSPEASLSLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKA
HHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTASAFFNKLTLMANVSMTLPYL
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDST
HHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
LWMIGGPVFFSLLAMAIYQNYCSRMANKPELALD
EEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GAFYTRAEMKDGFMPHTIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIFSA
CCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHH
LLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKV
HHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCEE
WVPFSTFLYGSDMTQHWRIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARITAVGGIA
EECHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAV
HHHHHHHHHHHHHHHHHHCCCCHHHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
GGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHH
MKSLGVTLGNALHLSPEASLSLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKA
HHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTASAFFNKLTLMANVSMTLPYL
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDST
HHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
LWMIGGPVFFSLLAMAIYQNYCSRMANKPELALD
EEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]