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The map label for this gene is paaY [H]

Identifier: 209396400

GI number: 209396400

Start: 39188

End: 39778

Strand: Reverse

Name: paaY [H]

Synonym: ECH74115_0039

Alternate gene names: 209396400

Gene position: 39778-39188 (Counterclockwise)

Preceding gene: 209398425

Following gene: 209396122

Centisome position: 0.71

GC content: 55.16

Gene sequence:

>591_bases
GTGAGCTATTACGCCTTTGAGGGGTTAATTCCGGTGGTTCACCCGACGGCGTTTGTCCATCCCAGTGCCGTCTTGATTGG
CGATGTGATTGTGGGAGCCGGTGTCTACATCGGCCCACTCGCCTCACTGCGTGGTGACTACGGGCGGTTGATCGTGCAAG
CGGGAGCCAATATTCAGGATGGCTGCATTATGCATGGCTACACCGACACTGACACCATCGTTGGGGAAAACGGCCATATC
GGGCACGGAGCGATCCTGCATGGTTGTGTGATTGGTCGCGATGCATTGGTCGGGATGAACAGCGTGATTATGGATGGCGC
GGTCATTGGCGAAGAGAGCATTGTTGCCGCCATGAGCTTTGTCAAAGCAGGCTTTCACGGCGAGAAACGCCAGTTGTTGA
TGGGTACGCCAGCCCGCGCTGTACGCAGTGTTAGTGACGACGAGTTACACTGGAAACGGTTGAATACCAAAGAGTATCAG
GATCTTGTCGGGCGCTGTCATGCATCGTTACATGAAACACAGCCACTGAGGCAAATGGAGGAAAATCGCCCCCGTTTGCA
GGGGACGACGGATGTGACGCCTAAACGGTGA

Upstream 100 bases:

>100_bases
TGAAACACTATCCATCGGTTCTGCATTCGGAAGATGCCATTGAAGGGCCGCTGGCGTTTGCCGAGAAGCGCGATCCGGTG
TGGAAAGGACGTTAACAACC

Downstream 100 bases:

>100_bases
TCTTGCCGGATGCGGCGTAAACGCCTTATCCAACTCTGCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGC
ATCCGGCGACCAGGTCGCAC

Product: carnitine operon protein CaiE

Products: cofactor [C]

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYTDTDTIVGENGHI
GHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQ
DLVGRCHASLHETQPLRQMEENRPRLQGTTDVTPKR

Sequences:

>Translated_196_residues
MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYTDTDTIVGENGHI
GHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQ
DLVGRCHASLHETQPLRQMEENRPRLQGTTDVTPKR
>Mature_195_residues
SYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYTDTDTIVGENGHIG
HGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQD
LVGRCHASLHETQPLRQMEENRPRLQGTTDVTPKR

Specific function: Overproduction of CaiE stimulates the activity of CaiB and CaiD [H]

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI87081681, Length=196, Percent_Identity=97.4489795918367, Blast_Score=393, Evalue=1e-111,
Organism=Escherichia coli, GI1787667, Length=196, Percent_Identity=58.6734693877551, Blast_Score=247, Evalue=4e-67,
Organism=Escherichia coli, GI87082240, Length=177, Percent_Identity=32.2033898305085, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21155; Mature: 21023

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQD
CCCCCCCCCCHHHCCCHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHEEEEECCCCCCC
GCIMHGYTDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSF
CEEECCCCCCCCEECCCCCCCCHHHHHHHHHCCHHHHCCHHHHHCCCCCCHHHHHHHHHH
VKAGFHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQME
HHHCCCCCCCEEEECCCHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHH
ENRPRLQGTTDVTPKR
HCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQD
CCCCCCCCCHHHCCCHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHEEEEECCCCCCC
GCIMHGYTDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSF
CEEECCCCCCCCEECCCCCCCCHHHHHHHHHCCHHHHCCHHHHHCCCCCCHHHHHHHHHH
VKAGFHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQME
HHHCCCCCCCEEEECCCHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHH
ENRPRLQGTTDVTPKR
HCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: pre-cofactor [C]

Specific reaction: pre-cofactor = cofactor [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA