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The map label for this gene is ycbQ [H]

Identifier: 209396269

GI number: 209396269

Start: 1130696

End: 1131235

Strand: Direct

Name: ycbQ [H]

Synonym: ECH74115_1100

Alternate gene names: 209396269

Gene position: 1130696-1131235 (Clockwise)

Preceding gene: 209396683

Following gene: 209396888

Centisome position: 20.29

GC content: 42.22

Gene sequence:

>540_bases
ATGAAAAAAAGTGTATTGACGGCGTTTATAACTGTGGTATGTGCAACGTCCAGCGTTATGGCTGCTGATGATAATGCTAT
CACGGATGGCTCAGTAACATTTAATGGTAAAGTTATTGCTCCAGCTTGTACCCTGGTAGCTGCGACGAAAGATTCCGTGG
TGACTTTGCCAGATGTTAGTGCCACGAAGTTGCAAACCAATGGTCAGGTTTCTGGCGTGCAAACTGATGTGCCAATTGAA
TTAAAAGATTGTGATACTACCGTAACAAAAAATGCAACGTTCACCTTTAATGGCACTGCGGATACTACTCAGATTACAGC
GTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCA
AGCCAGACACAGAAACCGGGAACATTTTGTTGCAAGATGGAGATCAGACGTTGACTTTTAAAGTTGATTATATCGCTACG
GGGAAAGCGACTTCTGGTAATGTGAATGCGGTAACAAATTTCCATATTAACTATTATTAA

Upstream 100 bases:

>100_bases
TTAGTATGCTTGATTTAAATGGCGGACAATTATTGTTATTATTAAGTCTAATGTCATTTAAAGGCATTATCATATTTACG
AAGAGATCAGGATGATAACG

Downstream 100 bases:

>100_bases
TAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTATGGAGGGGATATTCATATTTTTTAAGAGTGACTAT
TTATGAAAACTTGCATAACA

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKKSVLTAFITVVCATSSVMAADDNAITDGSVTFNGKVIAPACTLVAATKDSVVTLPDVSATKLQTNGQVSGVQTDVPIE
LKDCDTTVTKNATFTFNGTADTTQITAFANQASSDAATNVALQMYMNDGTTAIKPDTETGNILLQDGDQTLTFKVDYIAT
GKATSGNVNAVTNFHINYY

Sequences:

>Translated_179_residues
MKKSVLTAFITVVCATSSVMAADDNAITDGSVTFNGKVIAPACTLVAATKDSVVTLPDVSATKLQTNGQVSGVQTDVPIE
LKDCDTTVTKNATFTFNGTADTTQITAFANQASSDAATNVALQMYMNDGTTAIKPDTETGNILLQDGDQTLTFKVDYIAT
GKATSGNVNAVTNFHINYY
>Mature_179_residues
MKKSVLTAFITVVCATSSVMAADDNAITDGSVTFNGKVIAPACTLVAATKDSVVTLPDVSATKLQTNGQVSGVQTDVPIE
LKDCDTTVTKNATFTFNGTADTTQITAFANQASSDAATNVALQMYMNDGTTAIKPDTETGNILLQDGDQTLTFKVDYIAT
GKATSGNVNAVTNFHINYY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI87081804, Length=179, Percent_Identity=98.8826815642458, Blast_Score=349, Evalue=5e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18695; Mature: 18695

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSVLTAFITVVCATSSVMAADDNAITDGSVTFNGKVIAPACTLVAATKDSVVTLPDVS
CCCHHHHHHHHHHHCCCCEEECCCCCCCCCEEEECCEEECCEEEEEEECCCCEEECCCCC
ATKLQTNGQVSGVQTDVPIELKDCDTTVTKNATFTFNGTADTTQITAFANQASSDAATNV
EEEEECCCCCCCEEECCCEEEECCCCEEECCEEEEECCCCCCEEEEEEECCCCCCCCCEE
ALQMYMNDGTTAIKPDTETGNILLQDGDQTLTFKVDYIATGKATSGNVNAVTNFHINYY
EEEEEECCCCEEECCCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MKKSVLTAFITVVCATSSVMAADDNAITDGSVTFNGKVIAPACTLVAATKDSVVTLPDVS
CCCHHHHHHHHHHHCCCCEEECCCCCCCCCEEEECCEEECCEEEEEEECCCCEEECCCCC
ATKLQTNGQVSGVQTDVPIELKDCDTTVTKNATFTFNGTADTTQITAFANQASSDAATNV
EEEEECCCCCCCEEECCCEEEECCCCEEECCEEEEECCCCCCEEEEEEECCCCCCCCCEE
ALQMYMNDGTTAIKPDTETGNILLQDGDQTLTFKVDYIATGKATSGNVNAVTNFHINYY
EEEEEECCCCEEECCCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]