| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is thiK [H]
Identifier: 209395825
GI number: 209395825
Start: 1465958
End: 1466782
Strand: Direct
Name: thiK [H]
Synonym: ECH74115_1486
Alternate gene names: 209395825
Gene position: 1465958-1466782 (Clockwise)
Preceding gene: 209400489
Following gene: 209396392
Centisome position: 26.31
GC content: 52.85
Gene sequence:
>825_bases GTGCCGTTTCGCAGCAATAATCCCATCACGCGCGACGAATTGCTGTCGCGCTTTTTCCCGCAGTTTCATCCCGTCACGAC GTTTAATAGTGGGCTTAGTGGCGGTAGTTTTCTCATTGAACATCAGGGCCAGCGTTTTGTTGTGCGTCAGCCGCACGATC CTGATGCGCCGCAGTCCGCGTTCTTGCACCAGTATCGGGCTTTATCACAACTACCCGCATGCATTGCACCGAAGCCGCAT TTATATCTCCGTGACTGGATGGTAGTCGACTATCTGCCCGGCGAGGTAAAAACGTATTTGCCGGATACCAACGAACTGGC AGGCTTGCTGTATTATCTACATCAACAACCACGTTTTGGCTGGCGAATAACGCTGTTGCCGTTACTGGAACTGTACTGGC AGCAAAGCGATCCGGCGCGGCGGACAGTGGGTTGGCTGCGAATGTTAAAACGTCTGCGCAAAGCGCGGGAACCACGGCCT TTACGCTTAAGTCCATTGCATATGGATGTCCACGCCGGAAATTTAGTGCATAGCGCGTCAGGGTTAAAACTCATCGACTG GGAGTATGCAGGAGATGGTGATATCGCGCTGGAACTGGCGGCGGTGTGGGTGGAAAATACTGAACAGCACCGGCAATTGG TCAATGACTATGCCACTCGCGCGAAGATTTATCCGGCGCAATTATGGCGTCAGGTCAGGCGATGGTTTCCCTGGCTGCTG ATGCTCAAAGCAGGGTGGTTTGAGTACCGCTGGCGACAAACCGGCGATCAACAATTTATCAGGCTGGCCGATGACACCTG GCGGCAGCTATTAATAAAACAATAA
Upstream 100 bases:
>100_bases TACGTGCTGTACTCCAGCGCCTCTGGCAACGTTAACGCTCCGACCCTACAAATGCAGCTGATGCTGGTGCAGACGGGCGA AATTATCTGGTCAGGTAAAG
Downstream 100 bases:
>100_bases GGAGAGCAGTGTGGGTCCAGTAATGTTGGATGTCGAAGGTTACGAACTGGACGCGGAAGAGCGTGAAATACTGGCGCATC CGCTGGTGGGAGGGCTGATT
Product: thiamine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MPFRSNNPITRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSAFLHQYRALSQLPACIAPKPH LYLRDWMVVDYLPGEVKTYLPDTNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRP LRLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLL MLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ
Sequences:
>Translated_274_residues MPFRSNNPITRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSAFLHQYRALSQLPACIAPKPH LYLRDWMVVDYLPGEVKTYLPDTNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRP LRLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLL MLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ >Mature_273_residues PFRSNNPITRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSAFLHQYRALSQLPACIAPKPHL YLRDWMVVDYLPGEVKTYLPDTNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRPL RLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLLM LKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ
Specific function: Catalyzes the phosphorylation of thiamine to thiamine phosphate [H]
COG id: COG0510
COG function: function code M; Predicted choline kinase involved in LPS biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine kinase family [H]
Homologues:
Organism=Escherichia coli, GI1787349, Length=274, Percent_Identity=98.9051094890511, Blast_Score=554, Evalue=1e-159,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 - InterPro: IPR014093 [H]
Pfam domain/function: PF01636 APH [H]
EC number: =2.7.1.89 [H]
Molecular weight: Translated: 32421; Mature: 32290
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFRSNNPITRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSA CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCHHHH FLHQYRALSQLPACIAPKPHLYLRDWMVVDYLPGEVKTYLPDTNELAGLLYYLHQQPRFG HHHHHHHHHHCCHHCCCCCCEEEECEEEEEECCCCCEECCCCCHHHHHHHHHHHCCCCCC WRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRPLRLSPLHMDVHAGNLVHSAS EEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCEEEEEECCCEEECCC GLKLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLL CCEEEEEEECCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH MLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ HHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PFRSNNPITRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSA CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCHHHH FLHQYRALSQLPACIAPKPHLYLRDWMVVDYLPGEVKTYLPDTNELAGLLYYLHQQPRFG HHHHHHHHHHCCHHCCCCCCEEEECEEEEEECCCCCEECCCCCHHHHHHHHHHHCCCCCC WRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRPLRLSPLHMDVHAGNLVHSAS EEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCEEEEEECCCEEECCC GLKLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLL CCEEEEEEECCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH MLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ HHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA