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The map label for this gene is ngr [H]

Identifier: 20806992

GI number: 20806992

Start: 499626

End: 500147

Strand: Direct

Name: ngr [H]

Synonym: TTE0487

Alternate gene names: 20806992

Gene position: 499626-500147 (Clockwise)

Preceding gene: 20806990

Following gene: 20806993

Centisome position: 18.58

GC content: 40.42

Gene sequence:

>522_bases
TTGCAAGGGGGAATTTTTATGAGAGAGATGACAAAGAAAAACTTACTGGATGCTTACGCAGGAGAAAGCCAGGCTCACAT
GAGGTATCAAATTTTTGCTGATGTGGCAGAAAAAGAAGGCAAGCCTAATATTGCCAAACTTTTCAGGGCTATTTCCTATG
CAGAACTGGTGCATGCCACAAATCACTATAAAACCCTGGGCGAAGTAGGGGACACAGTAAAAAATTTAGAAAAAGCGATT
GAAGGGGAGACTTTTGAGGTAGAGGAGATGTATCCTGCGTATAACGCTGTTGCAGAACTTCAGCAGGAGTCAGGAGCCAA
AAAAAGCATTCATTATGCTATTGAAGCAGAAAAGATACATGCAAAACTTTACGCTGAGGCAAAAGAAGCAGCATTAAAAG
GGGAAGACTTAAAAATTTCTAAAGTGTACATATGCCCTGTATGTGGATATACATCAGTAGACGTGCTTCCAGAAAAATGT
CCTATCTGCGGGGTGCCAAAAGAAAAATTTGTAGCCTTTTAA

Upstream 100 bases:

>100_bases
TTATGAGACCTTTTTAAGGTCTTTTTTATTTTACCTTATTGACTTCAAAAAAGAAAGTAGTATAATATTTTTTAGAAACT
AATTTTCTCATGATAAATTT

Downstream 100 bases:

>100_bases
AGTGCGCTTTTTAGCGCGCTTTTTTGTTTTTACAAAAATATTTGACATACCTTGTAAAGTGTGATATAGTAGACAGCAGA
AAATTTAATAACACGCTCTT

Product: rubrerythrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MQGGIFMREMTKKNLLDAYAGESQAHMRYQIFADVAEKEGKPNIAKLFRAISYAELVHATNHYKTLGEVGDTVKNLEKAI
EGETFEVEEMYPAYNAVAELQQESGAKKSIHYAIEAEKIHAKLYAEAKEAALKGEDLKISKVYICPVCGYTSVDVLPEKC
PICGVPKEKFVAF

Sequences:

>Translated_173_residues
MQGGIFMREMTKKNLLDAYAGESQAHMRYQIFADVAEKEGKPNIAKLFRAISYAELVHATNHYKTLGEVGDTVKNLEKAI
EGETFEVEEMYPAYNAVAELQQESGAKKSIHYAIEAEKIHAKLYAEAKEAALKGEDLKISKVYICPVCGYTSVDVLPEKC
PICGVPKEKFVAF
>Mature_173_residues
MQGGIFMREMTKKNLLDAYAGESQAHMRYQIFADVAEKEGKPNIAKLFRAISYAELVHATNHYKTLGEVGDTVKNLEKAI
EGETFEVEEMYPAYNAVAELQQESGAKKSIHYAIEAEKIHAKLYAEAKEAALKGEDLKISKVYICPVCGYTSVDVLPEKC
PICGVPKEKFVAF

Specific function: Exhibits NADH peroxidase activity (in vitro) [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 19271; Mature: 19271

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGGIFMREMTKKNLLDAYAGESQAHMRYQIFADVAEKEGKPNIAKLFRAISYAELVHAT
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
NHYKTLGEVGDTVKNLEKAIEGETFEVEEMYPAYNAVAELQQESGAKKSIHYAIEAEKIH
HHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHH
AKLYAEAKEAALKGEDLKISKVYICPVCGYTSVDVLPEKCPICGVPKEKFVAF
HHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure
MQGGIFMREMTKKNLLDAYAGESQAHMRYQIFADVAEKEGKPNIAKLFRAISYAELVHAT
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
NHYKTLGEVGDTVKNLEKAIEGETFEVEEMYPAYNAVAELQQESGAKKSIHYAIEAEKIH
HHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHH
AKLYAEAKEAALKGEDLKISKVYICPVCGYTSVDVLPEKCPICGVPKEKFVAF
HHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9226272; 8383040 [H]