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The map label for this gene is DeoB

Identifier: 20806971

GI number: 20806971

Start: 476084

End: 477265

Strand: Direct

Name: DeoB

Synonym: TTE0463

Alternate gene names: 20806971

Gene position: 476084-477265 (Clockwise)

Preceding gene: 20806970

Following gene: 20806972

Centisome position: 17.7

GC content: 42.47

Gene sequence:

>1182_bases
ATGCTGCAAAGAGTTATACTTATAGTCCTGGATAGCGTCGGAGTAGGGGAACTTCCAGACGCGTACAAGTTTGGCGATAA
AGGGACTAATACTTTGGGGCACGTGGTAGAAAAGACTGGGATTAAGCTTCCTACAATGGAGAAGCTGGGGTTAGGGAATA
TCATACCTTTGAAGACAGTGGCTCCAAATCCAAATGCCATTGGTGCTTATGGCAAGATGGCAGAGAAATCCGCTGGTAAA
GACACTACGACAGGGCACTGGGAAATAGCAGGGCTCATTGTAGAAAAACCTTTTCCTACTTATCCCGAGGGCTTTCCAAA
GGAGATTATTGAAGAATTTGAAAAAAGAATTGGAAGAAAGGTCCTAGGCAATAAACCTGCCTCAGGTACTGAGATAATAA
AAGAGCTGGGAGAAGAGCATATAAAGACAGGCTATCCCATTGTATACACTTCTGCTGACAGCGTGTTTCAAATTGCAGCC
CATGAAGAAGTCATTCCTTTGGAAGAGCTTTATAGAATGTGTGAAATTGCCAGGGAAATATTGAAAGGGGACCATGCCGT
AGGGCGGGTTATTGCAAGGCCTTTTATAGGTTCACCGGGCAATTTTGTAAGGACAGCTAATAGAAGAGACTTTTCTCTCA
AGCCTTTTGGACCTACTGTACTTGACATGTTGAAAGAAGCAGGTTATCAGGTATATGCAGTTGGGAAGATAGAGGACATA
TTTGCAGGGCAGGGCATTACAGACAGCGTTCATACTGGAAATAATGACGAGGGCATTACGGCTACTATAGAGGCAATGGA
TGCGGTAAAGAAGGGGATTATTTTTACTAATTTAGTAGACTTTGATATGGTGTATGGGCACAGGAATGATGTTAACGGGT
ATGCAAAAGCTTTAAAGCATTTTGATGAAAGGCTTCCTGAGATAATGTTAAGGCTTAAAGAGGAAGATTTGCTGATTATA
ACAGCTGACCATGGCTGTGACCCCACAACTCCAGGAACAGACCATACAAGAGAATACGTGCCTCTTTTGGTTTACAGTCC
TTCTATGAAAGAAGGTAGAAATCTTGGGCTGAGAAAAACATATGCTGATGTGGCAGCTACAATTGCTGAAATTTTCAACG
TGGGTCCTATACACACAGGCACTTCTTTTTTAAGGGAATTACCTTTGAAAGTGGGGGTATAA

Upstream 100 bases:

>100_bases
TGACCATGCGATAATGACTGTAAGAGATTTATTGCCAGGAGCTTTCACATCTAAAGATATGGAAAAGTAGTAATTCTATA
CTAACAAAAGAGGTGGTAAA

Downstream 100 bases:

>100_bases
TTTATGAGAATGTATGACCTTATACTAAAAAAGAGGGATGGCGGTATACTCACCAAAGAGGAAATAGATTTTATAATCTC
AGGCTACACAAAAGACTACA

Product: phosphopentomutase

Products: NA

Alternate protein names: Phosphodeoxyribomutase

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MLQRVILIVLDSVGVGELPDAYKFGDKGTNTLGHVVEKTGIKLPTMEKLGLGNIIPLKTVAPNPNAIGAYGKMAEKSAGK
DTTTGHWEIAGLIVEKPFPTYPEGFPKEIIEEFEKRIGRKVLGNKPASGTEIIKELGEEHIKTGYPIVYTSADSVFQIAA
HEEVIPLEELYRMCEIAREILKGDHAVGRVIARPFIGSPGNFVRTANRRDFSLKPFGPTVLDMLKEAGYQVYAVGKIEDI
FAGQGITDSVHTGNNDEGITATIEAMDAVKKGIIFTNLVDFDMVYGHRNDVNGYAKALKHFDERLPEIMLRLKEEDLLII
TADHGCDPTTPGTDHTREYVPLLVYSPSMKEGRNLGLRKTYADVAATIAEIFNVGPIHTGTSFLRELPLKVGV

Sequences:

>Translated_393_residues
MLQRVILIVLDSVGVGELPDAYKFGDKGTNTLGHVVEKTGIKLPTMEKLGLGNIIPLKTVAPNPNAIGAYGKMAEKSAGK
DTTTGHWEIAGLIVEKPFPTYPEGFPKEIIEEFEKRIGRKVLGNKPASGTEIIKELGEEHIKTGYPIVYTSADSVFQIAA
HEEVIPLEELYRMCEIAREILKGDHAVGRVIARPFIGSPGNFVRTANRRDFSLKPFGPTVLDMLKEAGYQVYAVGKIEDI
FAGQGITDSVHTGNNDEGITATIEAMDAVKKGIIFTNLVDFDMVYGHRNDVNGYAKALKHFDERLPEIMLRLKEEDLLII
TADHGCDPTTPGTDHTREYVPLLVYSPSMKEGRNLGLRKTYADVAATIAEIFNVGPIHTGTSFLRELPLKVGV
>Mature_393_residues
MLQRVILIVLDSVGVGELPDAYKFGDKGTNTLGHVVEKTGIKLPTMEKLGLGNIIPLKTVAPNPNAIGAYGKMAEKSAGK
DTTTGHWEIAGLIVEKPFPTYPEGFPKEIIEEFEKRIGRKVLGNKPASGTEIIKELGEEHIKTGYPIVYTSADSVFQIAA
HEEVIPLEELYRMCEIAREILKGDHAVGRVIARPFIGSPGNFVRTANRRDFSLKPFGPTVLDMLKEAGYQVYAVGKIEDI
FAGQGITDSVHTGNNDEGITATIEAMDAVKKGIIFTNLVDFDMVYGHRNDVNGYAKALKHFDERLPEIMLRLKEEDLLII
TADHGCDPTTPGTDHTREYVPLLVYSPSMKEGRNLGLRKTYADVAATIAEIFNVGPIHTGTSFLRELPLKVGV

Specific function: Phosphotransfer between the C1 and C5 carbon atoms of pentose

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphopentomutase family

Homologues:

Organism=Escherichia coli, GI1790843, Length=409, Percent_Identity=47.921760391198, Blast_Score=348, Evalue=5e-97,
Organism=Escherichia coli, GI1789781, Length=435, Percent_Identity=28.735632183908, Blast_Score=131, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DEOB_THETN (Q8RCG6)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_622142.1
- ProteinModelPortal:   Q8RCG6
- SMR:   Q8RCG6
- GeneID:   998075
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE0463
- NMPDR:   fig|273068.3.peg.743
- HOGENOM:   HBG644230
- OMA:   CHASGTE
- ProtClustDB:   PRK05362
- BioCyc:   TTEN273068:TTE0463-MONOMER
- BRENDA:   5.4.2.7
- GO:   GO:0005737
- HAMAP:   MF_00740
- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR010045
- InterPro:   IPR006124
- Gene3D:   G3DSA:3.40.720.10
- PIRSF:   PIRSF001491
- TIGRFAMs:   TIGR01696

Pfam domain/function: PF01676 Metalloenzyme; SSF53649 Alkaline_phosphatase_core

EC number: =5.4.2.7

Molecular weight: Translated: 43099; Mature: 43099

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQRVILIVLDSVGVGELPDAYKFGDKGTNTLGHVVEKTGIKLPTMEKLGLGNIIPLKTV
CCHHEEEEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCEEECEE
APNPNAIGAYGKMAEKSAGKDTTTGHWEIAGLIVEKPFPTYPEGFPKEIIEEFEKRIGRK
CCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
VLGNKPASGTEIIKELGEEHIKTGYPIVYTSADSVFQIAAHEEVIPLEELYRMCEIAREI
HHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHH
LKGDHAVGRVIARPFIGSPGNFVRTANRRDFSLKPFGPTVLDMLKEAGYQVYAVGKIEDI
HCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCHHHH
FAGQGITDSVHTGNNDEGITATIEAMDAVKKGIIFTNLVDFDMVYGHRNDVNGYAKALKH
HCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
FDERLPEIMLRLKEEDLLIITADHGCDPTTPGTDHTREYVPLLVYSPSMKEGRNLGLRKT
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHCCCCCCCHHH
YADVAATIAEIFNVGPIHTGTSFLRELPLKVGV
HHHHHHHHHHHHCCCCCCHHHHHHHHCCHHCCC
>Mature Secondary Structure
MLQRVILIVLDSVGVGELPDAYKFGDKGTNTLGHVVEKTGIKLPTMEKLGLGNIIPLKTV
CCHHEEEEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCEEECEE
APNPNAIGAYGKMAEKSAGKDTTTGHWEIAGLIVEKPFPTYPEGFPKEIIEEFEKRIGRK
CCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
VLGNKPASGTEIIKELGEEHIKTGYPIVYTSADSVFQIAAHEEVIPLEELYRMCEIAREI
HHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHH
LKGDHAVGRVIARPFIGSPGNFVRTANRRDFSLKPFGPTVLDMLKEAGYQVYAVGKIEDI
HCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCHHHH
FAGQGITDSVHTGNNDEGITATIEAMDAVKKGIIFTNLVDFDMVYGHRNDVNGYAKALKH
HCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
FDERLPEIMLRLKEEDLLIITADHGCDPTTPGTDHTREYVPLLVYSPSMKEGRNLGLRKT
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHCCCCCCCHHH
YADVAATIAEIFNVGPIHTGTSFLRELPLKVGV
HHHHHHHHHHHHCCCCCCHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336