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The map label for this gene is 20094720

Identifier: 20094720

GI number: 20094720

Start: 1283981

End: 1284406

Strand: Reverse

Name: 20094720

Synonym: MK1284

Alternate gene names: NA

Gene position: 1284406-1283981 (Counterclockwise)

Preceding gene: 20094723

Following gene: 20094719

Centisome position: 75.78

GC content: 68.78

Gene sequence:

>426_bases
GTGGCCCCCTCGGGATCGTACGAGGAGGCACGGTCGCTGTGGGAACGTGCCGGTGAGGCGCTCGAGCTCGCGAGGTTCAG
CCTGGAGGAAGGGATGTACAGGTGGACCGCGTTCCACGCCGAGCAGGCCGTGCGACTGGGGATCAAGGCCGCGCTGGCGT
TCCTGACCGGTGAGTACCCCAGGGTCCGCGGGCTCTCCGAGCTGTTGGGGGTCCTGGTCGACGTCACCGGGGACCGGAGG
GTGAGGGAGCTCGCGGGGGAACTCCGGGAAGAGCTGAAGATGCTCTCCGACGCGTACACGGCCGCGCGTTACCGGGTCGA
GTTCCCCTACGACACCAGGGAGGACGCGGAACGGTTCATCGAGACCGCCGAGCGGGTGCTCTCCACGCTCGGGGAGCTCC
TACGGGAGCACGGGTTCGAGGTGTGA

Upstream 100 bases:

>100_bases
ACCCAGTACCTCCATCTCCGAACGTACTCCAGGAAGAGCCGGTACCGCCTCCGGAGGTACTTCACGTACCAGTCCGGGAC
GTCCCCACGTGACACCGGGG

Downstream 100 bases:

>100_bases
TGTTAAACACATTTGTTTCCCTTCACTCGATCCGGTTTCGGCCCGTCCTCGACGATCATCGTTACGCTTAAGAGGTCACC
GGGGTGCCGGAGGCCGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MAPSGSYEEARSLWERAGEALELARFSLEEGMYRWTAFHAEQAVRLGIKAALAFLTGEYPRVRGLSELLGVLVDVTGDRR
VRELAGELREELKMLSDAYTAARYRVEFPYDTREDAERFIETAERVLSTLGELLREHGFEV

Sequences:

>Translated_141_residues
MAPSGSYEEARSLWERAGEALELARFSLEEGMYRWTAFHAEQAVRLGIKAALAFLTGEYPRVRGLSELLGVLVDVTGDRR
VRELAGELREELKMLSDAYTAARYRVEFPYDTREDAERFIETAERVLSTLGELLREHGFEV
>Mature_140_residues
APSGSYEEARSLWERAGEALELARFSLEEGMYRWTAFHAEQAVRLGIKAALAFLTGEYPRVRGLSELLGVLVDVTGDRRV
RELAGELREELKMLSDAYTAARYRVEFPYDTREDAERFIETAERVLSTLGELLREHGFEV

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16089; Mature: 15958

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPSGSYEEARSLWERAGEALELARFSLEEGMYRWTAFHAEQAVRLGIKAALAFLTGEYP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
RVRGLSELLGVLVDVTGDRRVRELAGELREELKMLSDAYTAARYRVEFPYDTREDAERFI
HHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHH
ETAERVLSTLGELLREHGFEV
HHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
APSGSYEEARSLWERAGEALELARFSLEEGMYRWTAFHAEQAVRLGIKAALAFLTGEYP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
RVRGLSELLGVLVDVTGDRRVRELAGELREELKMLSDAYTAARYRVEFPYDTREDAERFI
HHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHH
ETAERVLSTLGELLREHGFEV
HHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA