Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094639

Identifier: 20094639

GI number: 20094639

Start: 1195681

End: 1196247

Strand: Reverse

Name: 20094639

Synonym: MK1203

Alternate gene names: NA

Gene position: 1196247-1195681 (Counterclockwise)

Preceding gene: 20094640

Following gene: 20094638

Centisome position: 70.58

GC content: 60.67

Gene sequence:

>567_bases
GTGGTCGACAATCTCTACGATCAGTTCGTAAAGTATCACGGCGACGCGCAGGCGTTGGTGGCTGTCTTCACGGGTAAGTC
GGTGCATCTCGCCACCGTGTGCGTGGGTGGCTACGCGGGAGACGTAGAGAAGTTGTCGGGCCTCTACTCGACCGTGAGGA
CCAGGCCGGAGTCGATGCGGTCCTTCCTCGAGTCGGTGATACCGACCCTCTGGAAGTACTTGAGCATGCACCTACCGGAC
GACGTCGGCGATCGTCCCGCTCACATGATCAGCTCGGGTACTCCGTTCTATTCTGGACTAGCCTCAGGCTACGTCCACTC
GTACCTGGCGGCGTCCGGAGGCGTACTGATAGCCGACACCAAGGACCCGGGGAGCGTGGAGCGTGCCCGACTGGTGCCGT
TCTACCCCGAGAGGGTGGGTAAGATAACGCTGGCTCGGGGATCGAACCTGGACGAGCGGTGCTACTCCTACTCCGAAGTC
GGATATTACGAGTGGAACGGTACCAAGTACGCGTGTGAGGCGGGACCGTTGACCAGGTTTAGCGGTAGCTTACAAGGCCG
GGGATGA

Upstream 100 bases:

>100_bases
GCCTGGAAAATTGGGCAGTTCCTATCAGTATTCAAGCCTCAGTATTCAAGACCACCTACTGTGGTCGTTGCTGATCTCGG
GGGACTTCCTACCCGATAGC

Downstream 100 bases:

>100_bases
AACCGTCAGGTGGTTCCTGGATTCGTGGAGTGAGAAACTGGACGTAGACGTGTGGGAACTCTTGAAACCGTGTGCCCGTA
ACAGGAACATAGCGAGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MVDNLYDQFVKYHGDAQALVAVFTGKSVHLATVCVGGYAGDVEKLSGLYSTVRTRPESMRSFLESVIPTLWKYLSMHLPD
DVGDRPAHMISSGTPFYSGLASGYVHSYLAASGGVLIADTKDPGSVERARLVPFYPERVGKITLARGSNLDERCYSYSEV
GYYEWNGTKYACEAGPLTRFSGSLQGRG

Sequences:

>Translated_188_residues
MVDNLYDQFVKYHGDAQALVAVFTGKSVHLATVCVGGYAGDVEKLSGLYSTVRTRPESMRSFLESVIPTLWKYLSMHLPD
DVGDRPAHMISSGTPFYSGLASGYVHSYLAASGGVLIADTKDPGSVERARLVPFYPERVGKITLARGSNLDERCYSYSEV
GYYEWNGTKYACEAGPLTRFSGSLQGRG
>Mature_188_residues
MVDNLYDQFVKYHGDAQALVAVFTGKSVHLATVCVGGYAGDVEKLSGLYSTVRTRPESMRSFLESVIPTLWKYLSMHLPD
DVGDRPAHMISSGTPFYSGLASGYVHSYLAASGGVLIADTKDPGSVERARLVPFYPERVGKITLARGSNLDERCYSYSEV
GYYEWNGTKYACEAGPLTRFSGSLQGRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20527; Mature: 20527

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDNLYDQFVKYHGDAQALVAVFTGKSVHLATVCVGGYAGDVEKLSGLYSTVRTRPESMR
CCCHHHHHHHHHCCCHHEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHH
SFLESVIPTLWKYLSMHLPDDVGDRPAHMISSGTPFYSGLASGYVHSYLAASGGVLIADT
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEC
KDPGSVERARLVPFYPERVGKITLARGSNLDERCYSYSEVGYYEWNGTKYACEAGPLTRF
CCCCCCCCEEECCCCHHHHCEEEEECCCCHHHHHHHHHHCCEEEECCEEEEECCCCCCCC
SGSLQGRG
CCCCCCCC
>Mature Secondary Structure
MVDNLYDQFVKYHGDAQALVAVFTGKSVHLATVCVGGYAGDVEKLSGLYSTVRTRPESMR
CCCHHHHHHHHHCCCHHEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHH
SFLESVIPTLWKYLSMHLPDDVGDRPAHMISSGTPFYSGLASGYVHSYLAASGGVLIADT
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEC
KDPGSVERARLVPFYPERVGKITLARGSNLDERCYSYSEVGYYEWNGTKYACEAGPLTRF
CCCCCCCCEEECCCCHHHHCEEEEECCCCHHHHHHHHHHCCEEEECCEEEEECCCCCCCC
SGSLQGRG
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA