Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094618

Identifier: 20094618

GI number: 20094618

Start: 1177071

End: 1177787

Strand: Reverse

Name: 20094618

Synonym: MK1182

Alternate gene names: NA

Gene position: 1177787-1177071 (Counterclockwise)

Preceding gene: 20094619

Following gene: 20094616

Centisome position: 69.49

GC content: 62.34

Gene sequence:

>717_bases
GTGCTGCAGGCGCTCGCGTTCGTCCTACTTCTCACGATCGCACCCGCAGCCGTACACGCGGGCCAGGTCACGGTGAATGT
GGCTCTCGACGATATGGTCTCAAACGGTGCCGAGCTCGGTACCTACGACACATTGGTGAGTAAGCTCACCTTAGACGTCG
CGGTCACCGACGTCGGTACGGGGACCACCCACACCGCCGAGTTCAAGCTTTCCGAGGTCCCGAAATCGGTCACGTTCGAG
GGCATTAGGGGTCCCGTGACGGTCAGCGTGACGCTGAAGTACGACGGTAAGACCGCGCTCGCGGCGACGTTGTTCCCCGA
CTGGCCGTGCAGCTCGGCTACTGTCGACACGCCGGACGGTATGCTCCAGGCGCGGGTAGGCTGCGTAAGTCAGTACGTGG
CCGACACTGAATTCAGCACCGAGTGCGTCGTGGCAGCCGAGCTCTATCCGGGTCTGCATTCCACCGAGATCCCCGAGGAC
GCCAGGTACGTCCTCGCTAAGTTCAACGTGAAAGTGAAGGCTGAGGGACTGGCGCACGGGGGATCACGGGCGCGGATACA
CCTCGATGACGTCCTGGATACGGCTATGGACCTCGCCGAGCTCGTCCTGAAGTACATGCCACCGATCCTGATCGTGGCGC
CGGTGCTCGTCTTCATCGGGCCGACGGCCGTTGAGATGTTCGCGGAGTTCCTAAAGGCGATCCTAGTGGCGCTCTGA

Upstream 100 bases:

>100_bases
ACTTCACGATGACCCGAGAACGATCGGAGACGTCTCTACCACCGTGCGAAAAACTGAAAAGCCTCATCGATTTTCGGTAA
CGCTAACGGGGGAGGGTGTC

Downstream 100 bases:

>100_bases
TACCCTCCCCGGCCGAACGTCACGGATATCGTAACGATAAGTCCCGCGGCGGTCCGCCGTCCTTCGGTGCACGGTTTGAC
CGGCGCACGATCCGTCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MLQALAFVLLLTIAPAAVHAGQVTVNVALDDMVSNGAELGTYDTLVSKLTLDVAVTDVGTGTTHTAEFKLSEVPKSVTFE
GIRGPVTVSVTLKYDGKTALAATLFPDWPCSSATVDTPDGMLQARVGCVSQYVADTEFSTECVVAAELYPGLHSTEIPED
ARYVLAKFNVKVKAEGLAHGGSRARIHLDDVLDTAMDLAELVLKYMPPILIVAPVLVFIGPTAVEMFAEFLKAILVAL

Sequences:

>Translated_238_residues
MLQALAFVLLLTIAPAAVHAGQVTVNVALDDMVSNGAELGTYDTLVSKLTLDVAVTDVGTGTTHTAEFKLSEVPKSVTFE
GIRGPVTVSVTLKYDGKTALAATLFPDWPCSSATVDTPDGMLQARVGCVSQYVADTEFSTECVVAAELYPGLHSTEIPED
ARYVLAKFNVKVKAEGLAHGGSRARIHLDDVLDTAMDLAELVLKYMPPILIVAPVLVFIGPTAVEMFAEFLKAILVAL
>Mature_238_residues
MLQALAFVLLLTIAPAAVHAGQVTVNVALDDMVSNGAELGTYDTLVSKLTLDVAVTDVGTGTTHTAEFKLSEVPKSVTFE
GIRGPVTVSVTLKYDGKTALAATLFPDWPCSSATVDTPDGMLQARVGCVSQYVADTEFSTECVVAAELYPGLHSTEIPED
ARYVLAKFNVKVKAEGLAHGGSRARIHLDDVLDTAMDLAELVLKYMPPILIVAPVLVFIGPTAVEMFAEFLKAILVAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25208; Mature: 25208

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQALAFVLLLTIAPAAVHAGQVTVNVALDDMVSNGAELGTYDTLVSKLTLDVAVTDVGT
CHHHHHHHHHHHHHHHHEECCEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHEEEEEECCC
GTTHTAEFKLSEVPKSVTFEGIRGPVTVSVTLKYDGKTALAATLFPDWPCSSATVDTPDG
CCCEEEEEEHHHCCCCCEECCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCH
MLQARVGCVSQYVADTEFSTECVVAAELYPGLHSTEIPEDARYVLAKFNVKVKAEGLAHG
HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHEEEEEECEEEEECCCCCC
GSRARIHLDDVLDTAMDLAELVLKYMPPILIVAPVLVFIGPTAVEMFAEFLKAILVAL
CCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLQALAFVLLLTIAPAAVHAGQVTVNVALDDMVSNGAELGTYDTLVSKLTLDVAVTDVGT
CHHHHHHHHHHHHHHHHEECCEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHEEEEEECCC
GTTHTAEFKLSEVPKSVTFEGIRGPVTVSVTLKYDGKTALAATLFPDWPCSSATVDTPDG
CCCEEEEEEHHHCCCCCEECCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCH
MLQARVGCVSQYVADTEFSTECVVAAELYPGLHSTEIPEDARYVLAKFNVKVKAEGLAHG
HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHEEEEEECEEEEECCCCCC
GSRARIHLDDVLDTAMDLAELVLKYMPPILIVAPVLVFIGPTAVEMFAEFLKAILVAL
CCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA