| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094618
Identifier: 20094618
GI number: 20094618
Start: 1177071
End: 1177787
Strand: Reverse
Name: 20094618
Synonym: MK1182
Alternate gene names: NA
Gene position: 1177787-1177071 (Counterclockwise)
Preceding gene: 20094619
Following gene: 20094616
Centisome position: 69.49
GC content: 62.34
Gene sequence:
>717_bases GTGCTGCAGGCGCTCGCGTTCGTCCTACTTCTCACGATCGCACCCGCAGCCGTACACGCGGGCCAGGTCACGGTGAATGT GGCTCTCGACGATATGGTCTCAAACGGTGCCGAGCTCGGTACCTACGACACATTGGTGAGTAAGCTCACCTTAGACGTCG CGGTCACCGACGTCGGTACGGGGACCACCCACACCGCCGAGTTCAAGCTTTCCGAGGTCCCGAAATCGGTCACGTTCGAG GGCATTAGGGGTCCCGTGACGGTCAGCGTGACGCTGAAGTACGACGGTAAGACCGCGCTCGCGGCGACGTTGTTCCCCGA CTGGCCGTGCAGCTCGGCTACTGTCGACACGCCGGACGGTATGCTCCAGGCGCGGGTAGGCTGCGTAAGTCAGTACGTGG CCGACACTGAATTCAGCACCGAGTGCGTCGTGGCAGCCGAGCTCTATCCGGGTCTGCATTCCACCGAGATCCCCGAGGAC GCCAGGTACGTCCTCGCTAAGTTCAACGTGAAAGTGAAGGCTGAGGGACTGGCGCACGGGGGATCACGGGCGCGGATACA CCTCGATGACGTCCTGGATACGGCTATGGACCTCGCCGAGCTCGTCCTGAAGTACATGCCACCGATCCTGATCGTGGCGC CGGTGCTCGTCTTCATCGGGCCGACGGCCGTTGAGATGTTCGCGGAGTTCCTAAAGGCGATCCTAGTGGCGCTCTGA
Upstream 100 bases:
>100_bases ACTTCACGATGACCCGAGAACGATCGGAGACGTCTCTACCACCGTGCGAAAAACTGAAAAGCCTCATCGATTTTCGGTAA CGCTAACGGGGGAGGGTGTC
Downstream 100 bases:
>100_bases TACCCTCCCCGGCCGAACGTCACGGATATCGTAACGATAAGTCCCGCGGCGGTCCGCCGTCCTTCGGTGCACGGTTTGAC CGGCGCACGATCCGTCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MLQALAFVLLLTIAPAAVHAGQVTVNVALDDMVSNGAELGTYDTLVSKLTLDVAVTDVGTGTTHTAEFKLSEVPKSVTFE GIRGPVTVSVTLKYDGKTALAATLFPDWPCSSATVDTPDGMLQARVGCVSQYVADTEFSTECVVAAELYPGLHSTEIPED ARYVLAKFNVKVKAEGLAHGGSRARIHLDDVLDTAMDLAELVLKYMPPILIVAPVLVFIGPTAVEMFAEFLKAILVAL
Sequences:
>Translated_238_residues MLQALAFVLLLTIAPAAVHAGQVTVNVALDDMVSNGAELGTYDTLVSKLTLDVAVTDVGTGTTHTAEFKLSEVPKSVTFE GIRGPVTVSVTLKYDGKTALAATLFPDWPCSSATVDTPDGMLQARVGCVSQYVADTEFSTECVVAAELYPGLHSTEIPED ARYVLAKFNVKVKAEGLAHGGSRARIHLDDVLDTAMDLAELVLKYMPPILIVAPVLVFIGPTAVEMFAEFLKAILVAL >Mature_238_residues MLQALAFVLLLTIAPAAVHAGQVTVNVALDDMVSNGAELGTYDTLVSKLTLDVAVTDVGTGTTHTAEFKLSEVPKSVTFE GIRGPVTVSVTLKYDGKTALAATLFPDWPCSSATVDTPDGMLQARVGCVSQYVADTEFSTECVVAAELYPGLHSTEIPED ARYVLAKFNVKVKAEGLAHGGSRARIHLDDVLDTAMDLAELVLKYMPPILIVAPVLVFIGPTAVEMFAEFLKAILVAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25208; Mature: 25208
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQALAFVLLLTIAPAAVHAGQVTVNVALDDMVSNGAELGTYDTLVSKLTLDVAVTDVGT CHHHHHHHHHHHHHHHHEECCEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHEEEEEECCC GTTHTAEFKLSEVPKSVTFEGIRGPVTVSVTLKYDGKTALAATLFPDWPCSSATVDTPDG CCCEEEEEEHHHCCCCCEECCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCH MLQARVGCVSQYVADTEFSTECVVAAELYPGLHSTEIPEDARYVLAKFNVKVKAEGLAHG HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHEEEEEECEEEEECCCCCC GSRARIHLDDVLDTAMDLAELVLKYMPPILIVAPVLVFIGPTAVEMFAEFLKAILVAL CCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLQALAFVLLLTIAPAAVHAGQVTVNVALDDMVSNGAELGTYDTLVSKLTLDVAVTDVGT CHHHHHHHHHHHHHHHHEECCEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHEEEEEECCC GTTHTAEFKLSEVPKSVTFEGIRGPVTVSVTLKYDGKTALAATLFPDWPCSSATVDTPDG CCCEEEEEEHHHCCCCCEECCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCH MLQARVGCVSQYVADTEFSTECVVAAELYPGLHSTEIPEDARYVLAKFNVKVKAEGLAHG HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHEEEEEECEEEEECCCCCC GSRARIHLDDVLDTAMDLAELVLKYMPPILIVAPVLVFIGPTAVEMFAEFLKAILVAL CCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA