Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094616

Identifier: 20094616

GI number: 20094616

Start: 1174740

End: 1175693

Strand: Reverse

Name: 20094616

Synonym: MK1180

Alternate gene names: NA

Gene position: 1175693-1174740 (Counterclockwise)

Preceding gene: 20094618

Following gene: 20094615

Centisome position: 69.36

GC content: 49.37

Gene sequence:

>954_bases
TTGAATCAGGGGCCCACCGTACTCCGATGCTGGCAACGACCGCCGACCTGCGTGCCCGAACCCCACCGGCTCACGCTGCG
GAACATCGCCACGATCCACGATCCCCGCGGTCTGATCTCCGGGACGATCAGCCGGGTGCTGAGCGGGGCCGAGTCGGGCG
CCCAGGGCTGGATCTACGGGAAAAAGGCCATAGGATGGAGAGAGAGGAGCGCCGAGCTCGAGCTAGCCACACTCAACAAC
CCGACGTTCGGTGTAGGCCGGCTGAAGGCCGAGGAACCCGACGTCGAATGGGAGCACTGGATCGTCTTCCACTCACCCGT
AGGCAAAGTTAGGATCGGTGATGTGGAGTTACCTACTGAGGAGCCACTGACGGTGAAATCTATAGAGGTGGATTGTGACT
CCAAGTTGATGAAAATTAATTTCAAGGACGATGCTAGGTCCTTGATGAGATTGGAAGGTGACGATGATCACTCGTGGGAA
CTGAAGAAATGTAGCGCGAACGTGAAGTTTAACATGTCGCCTAAGGTTGAGGATGAAGAAGTCAAATGTATTTATGAAAT
CCGTGCTGAGAAAGAGAATTTTTCCCTGAAAACTATTGATAATGTTATCGAGTATTTACAGGAAAAGGAAGTATTTTCAT
GTGAGAAGATTTGGGAAAAACCTGAGAAAGCGAAAAGTAAAAGTCGAGTGAGTAAGTATATAGAGATACTTGTCGAAGTC
GAGTTGAGTAATTTCATTGACAAAGTTAGCAAAGTTGATGTAGATTACAGGTTGAACGGGAAGAAGAAGTTTAAAGTTGT
CGACGCTGAGTTGCTGGTTGTATTGAATAAGGATAAGGTTAAAAAGGAGTTACTGGAGCGATTGTACGGGGTTAGCGGGG
ACATAGATTTCGCCGATGAGGTGCTCTTCCTGACGTTCGCACCACATGCCAGGTTCAAGAGCAGCACGAGTTGA

Upstream 100 bases:

>100_bases
TCTCGACCGACCGTCCCCTGAAGATAAGGAATTTAAAACTCACTGGAAAGGGTGCTTCCGCCAACGTTGGCGTCAAGTTG
TGAAGCGCGGGGGACCAAGG

Downstream 100 bases:

>100_bases
CGGTTCCGCGTGGGACGAACCGGCCCAGGTCGATCTCGAGCCGTCATCCCGACGCCTTCCGTCCCTTCCGGATCGGAGCC
CGAGACTCGGTGACTACCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MNQGPTVLRCWQRPPTCVPEPHRLTLRNIATIHDPRGLISGTISRVLSGAESGAQGWIYGKKAIGWRERSAELELATLNN
PTFGVGRLKAEEPDVEWEHWIVFHSPVGKVRIGDVELPTEEPLTVKSIEVDCDSKLMKINFKDDARSLMRLEGDDDHSWE
LKKCSANVKFNMSPKVEDEEVKCIYEIRAEKENFSLKTIDNVIEYLQEKEVFSCEKIWEKPEKAKSKSRVSKYIEILVEV
ELSNFIDKVSKVDVDYRLNGKKKFKVVDAELLVVLNKDKVKKELLERLYGVSGDIDFADEVLFLTFAPHARFKSSTS

Sequences:

>Translated_317_residues
MNQGPTVLRCWQRPPTCVPEPHRLTLRNIATIHDPRGLISGTISRVLSGAESGAQGWIYGKKAIGWRERSAELELATLNN
PTFGVGRLKAEEPDVEWEHWIVFHSPVGKVRIGDVELPTEEPLTVKSIEVDCDSKLMKINFKDDARSLMRLEGDDDHSWE
LKKCSANVKFNMSPKVEDEEVKCIYEIRAEKENFSLKTIDNVIEYLQEKEVFSCEKIWEKPEKAKSKSRVSKYIEILVEV
ELSNFIDKVSKVDVDYRLNGKKKFKVVDAELLVVLNKDKVKKELLERLYGVSGDIDFADEVLFLTFAPHARFKSSTS
>Mature_317_residues
MNQGPTVLRCWQRPPTCVPEPHRLTLRNIATIHDPRGLISGTISRVLSGAESGAQGWIYGKKAIGWRERSAELELATLNN
PTFGVGRLKAEEPDVEWEHWIVFHSPVGKVRIGDVELPTEEPLTVKSIEVDCDSKLMKINFKDDARSLMRLEGDDDHSWE
LKKCSANVKFNMSPKVEDEEVKCIYEIRAEKENFSLKTIDNVIEYLQEKEVFSCEKIWEKPEKAKSKSRVSKYIEILVEV
ELSNFIDKVSKVDVDYRLNGKKKFKVVDAELLVVLNKDKVKKELLERLYGVSGDIDFADEVLFLTFAPHARFKSSTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36240; Mature: 36240

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQGPTVLRCWQRPPTCVPEPHRLTLRNIATIHDPRGLISGTISRVLSGAESGAQGWIYG
CCCCCCEEEECCCCCCCCCCCCEEEHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCEEEE
KKAIGWRERSAELELATLNNPTFGVGRLKAEEPDVEWEHWIVFHSPVGKVRIGDVELPTE
CCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCEEEEEEEECCCCEEEECCEECCCC
EPLTVKSIEVDCDSKLMKINFKDDARSLMRLEGDDDHSWELKKCSANVKFNMSPKVEDEE
CCCEEEEEEECCCCEEEEEEECHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCCCH
VKCIYEIRAEKENFSLKTIDNVIEYLQEKEVFSCEKIWEKPEKAKSKSRVSKYIEILVEV
HEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ELSNFIDKVSKVDVDYRLNGKKKFKVVDAELLVVLNKDKVKKELLERLYGVSGDIDFADE
HHHHHHHHHHHCCEEEEECCCEEEEEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCC
VLFLTFAPHARFKSSTS
EEEEEECCCCCCCCCCC
>Mature Secondary Structure
MNQGPTVLRCWQRPPTCVPEPHRLTLRNIATIHDPRGLISGTISRVLSGAESGAQGWIYG
CCCCCCEEEECCCCCCCCCCCCEEEHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCEEEE
KKAIGWRERSAELELATLNNPTFGVGRLKAEEPDVEWEHWIVFHSPVGKVRIGDVELPTE
CCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCEEEEEEEECCCCEEEECCEECCCC
EPLTVKSIEVDCDSKLMKINFKDDARSLMRLEGDDDHSWELKKCSANVKFNMSPKVEDEE
CCCEEEEEEECCCCEEEEEEECHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCCCH
VKCIYEIRAEKENFSLKTIDNVIEYLQEKEVFSCEKIWEKPEKAKSKSRVSKYIEILVEV
HEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ELSNFIDKVSKVDVDYRLNGKKKFKVVDAELLVVLNKDKVKKELLERLYGVSGDIDFADE
HHHHHHHHHHHCCEEEEECCCEEEEEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCC
VLFLTFAPHARFKSSTS
EEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA