| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094616
Identifier: 20094616
GI number: 20094616
Start: 1174740
End: 1175693
Strand: Reverse
Name: 20094616
Synonym: MK1180
Alternate gene names: NA
Gene position: 1175693-1174740 (Counterclockwise)
Preceding gene: 20094618
Following gene: 20094615
Centisome position: 69.36
GC content: 49.37
Gene sequence:
>954_bases TTGAATCAGGGGCCCACCGTACTCCGATGCTGGCAACGACCGCCGACCTGCGTGCCCGAACCCCACCGGCTCACGCTGCG GAACATCGCCACGATCCACGATCCCCGCGGTCTGATCTCCGGGACGATCAGCCGGGTGCTGAGCGGGGCCGAGTCGGGCG CCCAGGGCTGGATCTACGGGAAAAAGGCCATAGGATGGAGAGAGAGGAGCGCCGAGCTCGAGCTAGCCACACTCAACAAC CCGACGTTCGGTGTAGGCCGGCTGAAGGCCGAGGAACCCGACGTCGAATGGGAGCACTGGATCGTCTTCCACTCACCCGT AGGCAAAGTTAGGATCGGTGATGTGGAGTTACCTACTGAGGAGCCACTGACGGTGAAATCTATAGAGGTGGATTGTGACT CCAAGTTGATGAAAATTAATTTCAAGGACGATGCTAGGTCCTTGATGAGATTGGAAGGTGACGATGATCACTCGTGGGAA CTGAAGAAATGTAGCGCGAACGTGAAGTTTAACATGTCGCCTAAGGTTGAGGATGAAGAAGTCAAATGTATTTATGAAAT CCGTGCTGAGAAAGAGAATTTTTCCCTGAAAACTATTGATAATGTTATCGAGTATTTACAGGAAAAGGAAGTATTTTCAT GTGAGAAGATTTGGGAAAAACCTGAGAAAGCGAAAAGTAAAAGTCGAGTGAGTAAGTATATAGAGATACTTGTCGAAGTC GAGTTGAGTAATTTCATTGACAAAGTTAGCAAAGTTGATGTAGATTACAGGTTGAACGGGAAGAAGAAGTTTAAAGTTGT CGACGCTGAGTTGCTGGTTGTATTGAATAAGGATAAGGTTAAAAAGGAGTTACTGGAGCGATTGTACGGGGTTAGCGGGG ACATAGATTTCGCCGATGAGGTGCTCTTCCTGACGTTCGCACCACATGCCAGGTTCAAGAGCAGCACGAGTTGA
Upstream 100 bases:
>100_bases TCTCGACCGACCGTCCCCTGAAGATAAGGAATTTAAAACTCACTGGAAAGGGTGCTTCCGCCAACGTTGGCGTCAAGTTG TGAAGCGCGGGGGACCAAGG
Downstream 100 bases:
>100_bases CGGTTCCGCGTGGGACGAACCGGCCCAGGTCGATCTCGAGCCGTCATCCCGACGCCTTCCGTCCCTTCCGGATCGGAGCC CGAGACTCGGTGACTACCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MNQGPTVLRCWQRPPTCVPEPHRLTLRNIATIHDPRGLISGTISRVLSGAESGAQGWIYGKKAIGWRERSAELELATLNN PTFGVGRLKAEEPDVEWEHWIVFHSPVGKVRIGDVELPTEEPLTVKSIEVDCDSKLMKINFKDDARSLMRLEGDDDHSWE LKKCSANVKFNMSPKVEDEEVKCIYEIRAEKENFSLKTIDNVIEYLQEKEVFSCEKIWEKPEKAKSKSRVSKYIEILVEV ELSNFIDKVSKVDVDYRLNGKKKFKVVDAELLVVLNKDKVKKELLERLYGVSGDIDFADEVLFLTFAPHARFKSSTS
Sequences:
>Translated_317_residues MNQGPTVLRCWQRPPTCVPEPHRLTLRNIATIHDPRGLISGTISRVLSGAESGAQGWIYGKKAIGWRERSAELELATLNN PTFGVGRLKAEEPDVEWEHWIVFHSPVGKVRIGDVELPTEEPLTVKSIEVDCDSKLMKINFKDDARSLMRLEGDDDHSWE LKKCSANVKFNMSPKVEDEEVKCIYEIRAEKENFSLKTIDNVIEYLQEKEVFSCEKIWEKPEKAKSKSRVSKYIEILVEV ELSNFIDKVSKVDVDYRLNGKKKFKVVDAELLVVLNKDKVKKELLERLYGVSGDIDFADEVLFLTFAPHARFKSSTS >Mature_317_residues MNQGPTVLRCWQRPPTCVPEPHRLTLRNIATIHDPRGLISGTISRVLSGAESGAQGWIYGKKAIGWRERSAELELATLNN PTFGVGRLKAEEPDVEWEHWIVFHSPVGKVRIGDVELPTEEPLTVKSIEVDCDSKLMKINFKDDARSLMRLEGDDDHSWE LKKCSANVKFNMSPKVEDEEVKCIYEIRAEKENFSLKTIDNVIEYLQEKEVFSCEKIWEKPEKAKSKSRVSKYIEILVEV ELSNFIDKVSKVDVDYRLNGKKKFKVVDAELLVVLNKDKVKKELLERLYGVSGDIDFADEVLFLTFAPHARFKSSTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36240; Mature: 36240
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQGPTVLRCWQRPPTCVPEPHRLTLRNIATIHDPRGLISGTISRVLSGAESGAQGWIYG CCCCCCEEEECCCCCCCCCCCCEEEHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCEEEE KKAIGWRERSAELELATLNNPTFGVGRLKAEEPDVEWEHWIVFHSPVGKVRIGDVELPTE CCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCEEEEEEEECCCCEEEECCEECCCC EPLTVKSIEVDCDSKLMKINFKDDARSLMRLEGDDDHSWELKKCSANVKFNMSPKVEDEE CCCEEEEEEECCCCEEEEEEECHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCCCH VKCIYEIRAEKENFSLKTIDNVIEYLQEKEVFSCEKIWEKPEKAKSKSRVSKYIEILVEV HEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ELSNFIDKVSKVDVDYRLNGKKKFKVVDAELLVVLNKDKVKKELLERLYGVSGDIDFADE HHHHHHHHHHHCCEEEEECCCEEEEEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCC VLFLTFAPHARFKSSTS EEEEEECCCCCCCCCCC >Mature Secondary Structure MNQGPTVLRCWQRPPTCVPEPHRLTLRNIATIHDPRGLISGTISRVLSGAESGAQGWIYG CCCCCCEEEECCCCCCCCCCCCEEEHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCEEEE KKAIGWRERSAELELATLNNPTFGVGRLKAEEPDVEWEHWIVFHSPVGKVRIGDVELPTE CCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCEEEEEEEECCCCEEEECCEECCCC EPLTVKSIEVDCDSKLMKINFKDDARSLMRLEGDDDHSWELKKCSANVKFNMSPKVEDEE CCCEEEEEEECCCCEEEEEEECHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCCCH VKCIYEIRAEKENFSLKTIDNVIEYLQEKEVFSCEKIWEKPEKAKSKSRVSKYIEILVEV HEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ELSNFIDKVSKVDVDYRLNGKKKFKVVDAELLVVLNKDKVKKELLERLYGVSGDIDFADE HHHHHHHHHHHCCEEEEECCCEEEEEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCC VLFLTFAPHARFKSSTS EEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA