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The map label for this gene is 20094602

Identifier: 20094602

GI number: 20094602

Start: 1152967

End: 1154208

Strand: Reverse

Name: 20094602

Synonym: MK1166

Alternate gene names: NA

Gene position: 1154208-1152967 (Counterclockwise)

Preceding gene: 20094605

Following gene: 20094601

Centisome position: 68.1

GC content: 64.09

Gene sequence:

>1242_bases
ATGGCCGCTCCGCTGAAAGCCGGTGTCGGTGTCTCCAAGTCCAGTCCCGAGGAGGCGCTGGAGGGGGCCGCGGATTGGGG
TCTCGATAGAATCGATGCCGTCCTCTGCGCCTTCTCGCCTAGGCACGACCCCCACGAGGTTCGCGAGGCGATAGTGGAGT
ACCTCGAAGATGACAGGTGTCTGATCCTCGGTCTCTCGTCCGCCGGCAACATCACCACGGACGGGTTCAGCGACGGGTCC
GTGGCTATCCTCGCGATGGAACTCTCCAAGCTCGTAGCCATGGGAATGGCGATCGGCACGGGCTTATCGGAGGACCCGTA
CAGGGTCGCGAGGGAGACGGTAACCGAGGCCGCCAAGAGCGTGGAAGTGGACGTCTCCGCCTCACTGGCACCGGTGGCGA
CCAAACTCGTGACCGGTAACGTGGACGTGACCCGTCACTCGCTGGTCGACGCTCTACTCTTCACCGACGATCTGTGCTGT
TTGAACCACCCGGAGGCGTTGATGGAGGCACTCAGGGGCGTGCTGGACTGCCTGGGCACGGTGCCCCGAATCGTCGGCGG
TATGACGGCGGACGAGTACGAGTTCGAGCGCACGTACATCTTCGACGACTCGGGCGTGTACGAGGACGCGCTGGCGGTGC
TGATTCTGTACTCGTCCGTGAAACGTGGGCACGCGGTCGACCACGGTTTCGTCCCTTCCTCCGAGCCGATGATCGTGGAG
ACCGAGGGTGTGGACGTGATCAGGATGGACGGCGAACCCGCGCTGGACGTGTACGAGGAGGTCGTAGGTGAGGAAATCGG
GATGGAAACGCTACTGAAGTACCCCTTGGGGGTCGAGGATCCGGGTCCGCGTCCGTACCACCTGATCAGGACCCCGTTCG
AGGTGGACGAGGAAGAGAGAACCTTGAAGCTGGTGGCACAGCTCCCGAGCGGCGTCGCCGTCCGGGTGATGGAGCCGGGC
GACGTAGAGGATTCGTTCAAGAGGGCGGTGCAGCGGGCGCTGGAGGACGCCGGCTCGCCCGATGAGCTGGGCGCCGTGCT
CGTGTTCAACTGCATGGCCCGACACCTGATCGTCGACACGGACGACGCCGTAGACCTACTCCGGGACCTGGTGAGCGAGG
ACGTGCCCATCTTCGGGTTCAACTGCTACGGCGAGTACGGACTGACCCCCTCGGGTAAGTTCGTCCAGCACAACCAGACG
GTCGTGACGTACGTGCTGGGGAGTGAGGTCGTGGGCCGGTGA

Upstream 100 bases:

>100_bases
AGCCAACGTTGGAAAACTGTTGTCAAGTATTTGTCGACCGTGCATACGCATCCGATTACGATTTATCACCTCTGTTACTT
TACGGAAGGGGGAGTGAAGG

Downstream 100 bases:

>100_bases
GCCGGTCCTCGCATCCCGACTGAAGAGCGCGTGAGCGGCGAGGGGTCACACCTTTGGCGACGATCAGGTTCGTCGTCGAC
GGGATCGTGGTCGAGGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MAAPLKAGVGVSKSSPEEALEGAADWGLDRIDAVLCAFSPRHDPHEVREAIVEYLEDDRCLILGLSSAGNITTDGFSDGS
VAILAMELSKLVAMGMAIGTGLSEDPYRVARETVTEAAKSVEVDVSASLAPVATKLVTGNVDVTRHSLVDALLFTDDLCC
LNHPEALMEALRGVLDCLGTVPRIVGGMTADEYEFERTYIFDDSGVYEDALAVLILYSSVKRGHAVDHGFVPSSEPMIVE
TEGVDVIRMDGEPALDVYEEVVGEEIGMETLLKYPLGVEDPGPRPYHLIRTPFEVDEEERTLKLVAQLPSGVAVRVMEPG
DVEDSFKRAVQRALEDAGSPDELGAVLVFNCMARHLIVDTDDAVDLLRDLVSEDVPIFGFNCYGEYGLTPSGKFVQHNQT
VVTYVLGSEVVGR

Sequences:

>Translated_413_residues
MAAPLKAGVGVSKSSPEEALEGAADWGLDRIDAVLCAFSPRHDPHEVREAIVEYLEDDRCLILGLSSAGNITTDGFSDGS
VAILAMELSKLVAMGMAIGTGLSEDPYRVARETVTEAAKSVEVDVSASLAPVATKLVTGNVDVTRHSLVDALLFTDDLCC
LNHPEALMEALRGVLDCLGTVPRIVGGMTADEYEFERTYIFDDSGVYEDALAVLILYSSVKRGHAVDHGFVPSSEPMIVE
TEGVDVIRMDGEPALDVYEEVVGEEIGMETLLKYPLGVEDPGPRPYHLIRTPFEVDEEERTLKLVAQLPSGVAVRVMEPG
DVEDSFKRAVQRALEDAGSPDELGAVLVFNCMARHLIVDTDDAVDLLRDLVSEDVPIFGFNCYGEYGLTPSGKFVQHNQT
VVTYVLGSEVVGR
>Mature_412_residues
AAPLKAGVGVSKSSPEEALEGAADWGLDRIDAVLCAFSPRHDPHEVREAIVEYLEDDRCLILGLSSAGNITTDGFSDGSV
AILAMELSKLVAMGMAIGTGLSEDPYRVARETVTEAAKSVEVDVSASLAPVATKLVTGNVDVTRHSLVDALLFTDDLCCL
NHPEALMEALRGVLDCLGTVPRIVGGMTADEYEFERTYIFDDSGVYEDALAVLILYSSVKRGHAVDHGFVPSSEPMIVET
EGVDVIRMDGEPALDVYEEVVGEEIGMETLLKYPLGVEDPGPRPYHLIRTPFEVDEEERTLKLVAQLPSGVAVRVMEPGD
VEDSFKRAVQRALEDAGSPDELGAVLVFNCMARHLIVDTDDAVDLLRDLVSEDVPIFGFNCYGEYGLTPSGKFVQHNQTV
VTYVLGSEVVGR

Specific function: Unknown

COG id: COG3287

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44564; Mature: 44433

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPLKAGVGVSKSSPEEALEGAADWGLDRIDAVLCAFSPRHDPHEVREAIVEYLEDDRC
CCCCCCCCCCCCCCCHHHHHHCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCE
LILGLSSAGNITTDGFSDGSVAILAMELSKLVAMGMAIGTGLSEDPYRVARETVTEAAKS
EEEEECCCCCEECCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VEVDVSASLAPVATKLVTGNVDVTRHSLVDALLFTDDLCCLNHPEALMEALRGVLDCLGT
EEEECCCCHHHHHHHHEECCCCHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH
VPRIVGGMTADEYEFERTYIFDDSGVYEDALAVLILYSSVKRGHAVDHGFVPSSEPMIVE
HHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
TEGVDVIRMDGEPALDVYEEVVGEEIGMETLLKYPLGVEDPGPRPYHLIRTPFEVDEEER
ECCCEEEEECCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHH
TLKLVAQLPSGVAVRVMEPGDVEDSFKRAVQRALEDAGSPDELGAVLVFNCMARHLIVDT
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECC
DDAVDLLRDLVSEDVPIFGFNCYGEYGLTPSGKFVQHNQTVVTYVLGSEVVGR
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEECCCEEEEEEECHHHHCC
>Mature Secondary Structure 
AAPLKAGVGVSKSSPEEALEGAADWGLDRIDAVLCAFSPRHDPHEVREAIVEYLEDDRC
CCCCCCCCCCCCCCHHHHHHCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCE
LILGLSSAGNITTDGFSDGSVAILAMELSKLVAMGMAIGTGLSEDPYRVARETVTEAAKS
EEEEECCCCCEECCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VEVDVSASLAPVATKLVTGNVDVTRHSLVDALLFTDDLCCLNHPEALMEALRGVLDCLGT
EEEECCCCHHHHHHHHEECCCCHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH
VPRIVGGMTADEYEFERTYIFDDSGVYEDALAVLILYSSVKRGHAVDHGFVPSSEPMIVE
HHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
TEGVDVIRMDGEPALDVYEEVVGEEIGMETLLKYPLGVEDPGPRPYHLIRTPFEVDEEER
ECCCEEEEECCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHH
TLKLVAQLPSGVAVRVMEPGDVEDSFKRAVQRALEDAGSPDELGAVLVFNCMARHLIVDT
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECC
DDAVDLLRDLVSEDVPIFGFNCYGEYGLTPSGKFVQHNQTVVTYVLGSEVVGR
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEECCCEEEEEEECHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA