| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094601
Identifier: 20094601
GI number: 20094601
Start: 1151966
End: 1152913
Strand: Reverse
Name: 20094601
Synonym: MK1165
Alternate gene names: NA
Gene position: 1152913-1151966 (Counterclockwise)
Preceding gene: 20094602
Following gene: 20094600
Centisome position: 68.02
GC content: 66.35
Gene sequence:
>948_bases TTGGCGACGATCAGGTTCGTCGTCGACGGGATCGTGGTCGAGGGAAACGGAGGGAGGCTGGAGTTCGACCCGAAGACAAC GCTCATGAAGGGCGACGCCGCGTCCCTCGCCGGGTTCCTGGTGTGGTTGGACGGGCTGTTCGAGGCCGGGGTCCGACTCG TACGGAGGATGGCGGAGGGCGTCGAGCCGGTGGTCCCCGAAGGCGCCGAACCGTGGGTGGAACCGCCCCTCACCCTCCCG GTGTCGGGGGAGTACAGTAGGGTCGAGCTGAAGGGACTGATCGCCGGGATCGTGGAGAGCACGAAGGACCCCTGGACCGT GGCGTCGAGGGCGGCGAGGATCACGGAGTACCTGTCCGACAAGGGTGCGGTGAGGATCCTCCACGGTAGCGACCCGTACG ATGTGGTGGCGGTGGGCGTGCTGGCGCTGAAGGACGGCGCCGTGAGGGGGACGCTCGAGACCGTGAGATCGACGGTCGAG ACGATCGCAGAGGGTGCGAGAGATCTCATCCGGGAGGACGAGGGACGGGCGGACGAGGTAATCTCCGGGATCGTCGGTAA CGTCCTACTCAGGCTGGGATACTACGCCGTGAACGTGAGGGTCACCGACCGGGACGGCCGGGTGCACATCGTCCGGGACC CTTCGACGCACGCGGACCGTGTGGCGGTGGGTGTCCCGCTGACCGGTGAGGTACTGTACGGGACGTTGGTACCGGCCGCC GAGGTGGGTTTGAGGTGCCTCGAAAGGCGCGATTGGGTGGTGAACGCTATCATCGCGGAGAGGATCCGTCGACTAGGGCT GAGGACGGTGTCCGGGTCTCAGGTAGTGACTATCGACGGCGAGACGCTGAGGGGTGACGAGCTGGAGGAGTCGGCTACTG AGATCCTCGAGGAGGGCGACGTGGAACGAGGTTCGAGGCTTGAGAGGCCGTCCGAGCCCTCGGGATGA
Upstream 100 bases:
>100_bases AGACGGTCGTGACGTACGTGCTGGGGAGTGAGGTCGTGGGCCGGTGAGCCGGTCCTCGCATCCCGACTGAAGAGCGCGTG AGCGGCGAGGGGTCACACCT
Downstream 100 bases:
>100_bases CGTCGACGGTCTAGGCGGCGGGACCGTTCAGCCGTGCCGATAGGTCGGGGGAATCCACGACCTCAACCCTAACCCTGAAT AAAGTAACCTTATGAACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MATIRFVVDGIVVEGNGGRLEFDPKTTLMKGDAASLAGFLVWLDGLFEAGVRLVRRMAEGVEPVVPEGAEPWVEPPLTLP VSGEYSRVELKGLIAGIVESTKDPWTVASRAARITEYLSDKGAVRILHGSDPYDVVAVGVLALKDGAVRGTLETVRSTVE TIAEGARDLIREDEGRADEVISGIVGNVLLRLGYYAVNVRVTDRDGRVHIVRDPSTHADRVAVGVPLTGEVLYGTLVPAA EVGLRCLERRDWVVNAIIAERIRRLGLRTVSGSQVVTIDGETLRGDELEESATEILEEGDVERGSRLERPSEPSG
Sequences:
>Translated_315_residues MATIRFVVDGIVVEGNGGRLEFDPKTTLMKGDAASLAGFLVWLDGLFEAGVRLVRRMAEGVEPVVPEGAEPWVEPPLTLP VSGEYSRVELKGLIAGIVESTKDPWTVASRAARITEYLSDKGAVRILHGSDPYDVVAVGVLALKDGAVRGTLETVRSTVE TIAEGARDLIREDEGRADEVISGIVGNVLLRLGYYAVNVRVTDRDGRVHIVRDPSTHADRVAVGVPLTGEVLYGTLVPAA EVGLRCLERRDWVVNAIIAERIRRLGLRTVSGSQVVTIDGETLRGDELEESATEILEEGDVERGSRLERPSEPSG >Mature_314_residues ATIRFVVDGIVVEGNGGRLEFDPKTTLMKGDAASLAGFLVWLDGLFEAGVRLVRRMAEGVEPVVPEGAEPWVEPPLTLPV SGEYSRVELKGLIAGIVESTKDPWTVASRAARITEYLSDKGAVRILHGSDPYDVVAVGVLALKDGAVRGTLETVRSTVET IAEGARDLIREDEGRADEVISGIVGNVLLRLGYYAVNVRVTDRDGRVHIVRDPSTHADRVAVGVPLTGEVLYGTLVPAAE VGLRCLERRDWVVNAIIAERIRRLGLRTVSGSQVVTIDGETLRGDELEESATEILEEGDVERGSRLERPSEPSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33968; Mature: 33837
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIRFVVDGIVVEGNGGRLEFDPKTTLMKGDAASLAGFLVWLDGLFEAGVRLVRRMAEG CCEEEEEEEEEEEECCCCEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC VEPVVPEGAEPWVEPPLTLPVSGEYSRVELKGLIAGIVESTKDPWTVASRAARITEYLSD CCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC KGAVRILHGSDPYDVVAVGVLALKDGAVRGTLETVRSTVETIAEGARDLIREDEGRADEV CCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ISGIVGNVLLRLGYYAVNVRVTDRDGRVHIVRDPSTHADRVAVGVPLTGEVLYGTLVPAA HHHHHHHHHHHHCEEEEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCHHHHHHHCCHH EVGLRCLERRDWVVNAIIAERIRRLGLRTVSGSQVVTIDGETLRGDELEESATEILEEGD HHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCC VERGSRLERPSEPSG CCCCCCCCCCCCCCC >Mature Secondary Structure ATIRFVVDGIVVEGNGGRLEFDPKTTLMKGDAASLAGFLVWLDGLFEAGVRLVRRMAEG CEEEEEEEEEEEECCCCEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC VEPVVPEGAEPWVEPPLTLPVSGEYSRVELKGLIAGIVESTKDPWTVASRAARITEYLSD CCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC KGAVRILHGSDPYDVVAVGVLALKDGAVRGTLETVRSTVETIAEGARDLIREDEGRADEV CCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ISGIVGNVLLRLGYYAVNVRVTDRDGRVHIVRDPSTHADRVAVGVPLTGEVLYGTLVPAA HHHHHHHHHHHHCEEEEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCHHHHHHHCCHH EVGLRCLERRDWVVNAIIAERIRRLGLRTVSGSQVVTIDGETLRGDELEESATEILEEGD HHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCC VERGSRLERPSEPSG CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA