Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094599

Identifier: 20094599

GI number: 20094599

Start: 1149695

End: 1150318

Strand: Reverse

Name: 20094599

Synonym: MK1163

Alternate gene names: NA

Gene position: 1150318-1149695 (Counterclockwise)

Preceding gene: 20094600

Following gene: 20094594

Centisome position: 67.87

GC content: 60.42

Gene sequence:

>624_bases
TTGGTCGAGTCGCACGCTCACGTCCCGATACCCTCGGATCCCGTGGAGCGGATCCGAGCCCTCCGGGTACTACGGGAGGT
GTACAGTCGTGGGAAGAGGCCGAGCCTCGAGGTGACCTATCGGACGGTGAACGGTAGCACGTGCGGTCCTTACTACGTCG
CGAGATGGCGTCGCGACTCCCGACACAAGTGCGGGCGCACGCTCTACCTGGGCAAACCCGAGAACGAGAGTGTCCGGTTC
GTCGAGTGGCTGGTTTCCTTAAATCGAGCAGAGGTTCTGGAGCTCGCGCGACACCTCATGCGCAACCTCCGCTCGGTACT
CAAGACCCTACTCACCGAGGTCTCGAGCCTGCCATACAAACAGGCCCGACGGGTACTAGCCCGCGGGCTCGCCCTAACCT
TCAACGCCAGACCCTCGAACTCACCGCAAATCCGCGACCTCCTAGAAGAACTTCCCGACCGGCTCGAATCCTTCGCCGTG
AGAACCCTCGGAGGCTGGCCCGCACACTACTCCGCTCACTTGAACAAGATCATCCGTTTTAGAAAGAGATCCCTCGACGG
AAAACACGAAGTACCCGACGTCATGTTAGAACTCGAACGCTGGAAACTCCGGCACGGAACGTGA

Upstream 100 bases:

>100_bases
ATCCGAGTCACGGTTCCGGACTGTAAGGCTTATATCTCGGAGCGTTGTCCTAATCTTTCCCATACAATTTGGAGGCACCT
GAGGGGATCGCGTGCCGGGG

Downstream 100 bases:

>100_bases
GTCGGATGTGTCCGGTCCCAGCCGTAGCAGTCTCCGTGATCGGTGGGAGGATTGGATAACGGAGCGTGGTCGCGGTGAGC
ACGTAGGTCGTCGCTCCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MVESHAHVPIPSDPVERIRALRVLREVYSRGKRPSLEVTYRTVNGSTCGPYYVARWRRDSRHKCGRTLYLGKPENESVRF
VEWLVSLNRAEVLELARHLMRNLRSVLKTLLTEVSSLPYKQARRVLARGLALTFNARPSNSPQIRDLLEELPDRLESFAV
RTLGGWPAHYSAHLNKIIRFRKRSLDGKHEVPDVMLELERWKLRHGT

Sequences:

>Translated_207_residues
MVESHAHVPIPSDPVERIRALRVLREVYSRGKRPSLEVTYRTVNGSTCGPYYVARWRRDSRHKCGRTLYLGKPENESVRF
VEWLVSLNRAEVLELARHLMRNLRSVLKTLLTEVSSLPYKQARRVLARGLALTFNARPSNSPQIRDLLEELPDRLESFAV
RTLGGWPAHYSAHLNKIIRFRKRSLDGKHEVPDVMLELERWKLRHGT
>Mature_207_residues
MVESHAHVPIPSDPVERIRALRVLREVYSRGKRPSLEVTYRTVNGSTCGPYYVARWRRDSRHKCGRTLYLGKPENESVRF
VEWLVSLNRAEVLELARHLMRNLRSVLKTLLTEVSSLPYKQARRVLARGLALTFNARPSNSPQIRDLLEELPDRLESFAV
RTLGGWPAHYSAHLNKIIRFRKRSLDGKHEVPDVMLELERWKLRHGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24096; Mature: 24096

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVESHAHVPIPSDPVERIRALRVLREVYSRGKRPSLEVTYRTVNGSTCGPYYVARWRRDS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHCCHH
RHKCGRTLYLGKPENESVRFVEWLVSLNRAEVLELARHLMRNLRSVLKTLLTEVSSLPYK
HHHCCCEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QARRVLARGLALTFNARPSNSPQIRDLLEELPDRLESFAVRTLGGWPAHYSAHLNKIIRF
HHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
RKRSLDGKHEVPDVMLELERWKLRHGT
HHHCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVESHAHVPIPSDPVERIRALRVLREVYSRGKRPSLEVTYRTVNGSTCGPYYVARWRRDS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHCCHH
RHKCGRTLYLGKPENESVRFVEWLVSLNRAEVLELARHLMRNLRSVLKTLLTEVSSLPYK
HHHCCCEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QARRVLARGLALTFNARPSNSPQIRDLLEELPDRLESFAVRTLGGWPAHYSAHLNKIIRF
HHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
RKRSLDGKHEVPDVMLELERWKLRHGT
HHHCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA