| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20094594
Identifier: 20094594
GI number: 20094594
Start: 1144383
End: 1145600
Strand: Reverse
Name: 20094594
Synonym: MK1158
Alternate gene names: NA
Gene position: 1145600-1144383 (Counterclockwise)
Preceding gene: 20094599
Following gene: 20094593
Centisome position: 67.59
GC content: 63.79
Gene sequence:
>1218_bases TTGGGCGATCCGGGGGCCTCCGGCTGTGAGCTTCCGTTGGTGAGTCGGGAAACCGTCTCGCGCTTGAGGCTGGCGTACGG TGCGCTCTGCACCCTCTCGGCGCCCTTGGGGCTCCTCGGGTCGGACGCCGGCGTGATGGTGGCGGGTTTGGGTAGTATCG TAGGCGTTCTCCTCGGACTAATGAGGCCCTTTTCATTCCGCGAGAGGGCGCCGAAACCCGAGCACGCTAGGATCGGGACC CGACTACTCTATCCCACGGCCTCCTTCAACAGGCTCCGCGACGGCCCCAAGCTGGGGACGGCGCTCCCGCTGGCGATGAT CCCTGCCTTGATACTGTTCTTCACGATGTGGTTATCGACGGGGGATAGGACGGGCGTCGCGCTCACGGTCTTCCTGCTCA TATCCATCGCGGCGACGACCGTGTTCTCCTACCTGGTCAAACTCTCGGCGGCCATGACGCTCGGGTACGCGCTACCCGTA CGCGTCAAGCCCGAGGGCACGCGGGTGTCACTGGCGTCTCTCGGGTACTGCGAGGCCGAGTTGGTTACGGATGGAAACGT GAAGGTTTCCGGGTTTCGTGAGCTCGGTTCTTACCCGGTCGAGTACGGGGGCTTACCCGGGGACCCGCCCGGGGACTTGA GGATCCGCGTTGGTTACTTCCCGCCGGGGAAGCACGAGGTCGAGGTCCGGGATTGTGACTTCCTCTTCCTCAGGACCCGG GGCGTGTGCATGCTCTACGACTCCCGTGGACTGCCGGAGGACCGGGAGGGGGCGTTCCACCTAGCCCGGTGGTGGGAGAA GTTCTCGATGGCGTACGCGGCGTTGTGTTTACGGGAGGGCGTACCCGGCGCCGTGGAGCTCGAGAGGTGGTTGGAGCGTG TGAGGAACAATCGAGCCGTCGGGTTCCTCGTGCGGTACATGAACTGCGACTTCAACCTACCCGTTGTCGAGATGTGCGTC CTAGTCCTCTCCCTCCTCCCGATGACGGAGGCGGTGGACTTCGTGCTCACTAGAGGCGTTAGAGGTTGGGGCGCGCTCGA CGCGATGGTCGTCCTCGACGCGTTCACCCTCTGTCTGCTGGCCCTACCGGTGTTGTGCGGGTTGCTGCTCAATCGGAGGG CGGTGCGTTCGGGCCGCGTCTATGAGTGTTTACTGGAAGGCGAACCACCGCACCGTCGGCTCCTATCCACGTTATGCGTC TACAACCCATCGAAATAG
Upstream 100 bases:
>100_bases TGTCTCCCCTCATGCCCGCTGAAATCGGAGTCCCCCCGGACGATCGTTCAACGTGCCCAGACTCCCTTCACGAAGGAGGT CCGGCCGGGGGCTCGTTCCC
Downstream 100 bases:
>100_bases ACGTCCCTACATTACTGGGTAATTCTGTCCGTCCCCCTTCACTGTAGTTCTCCCGTAACCTTAGGACGATCTCCGGTGAT CATCCCGGGCTCCGCCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MGDPGASGCELPLVSRETVSRLRLAYGALCTLSAPLGLLGSDAGVMVAGLGSIVGVLLGLMRPFSFRERAPKPEHARIGT RLLYPTASFNRLRDGPKLGTALPLAMIPALILFFTMWLSTGDRTGVALTVFLLISIAATTVFSYLVKLSAAMTLGYALPV RVKPEGTRVSLASLGYCEAELVTDGNVKVSGFRELGSYPVEYGGLPGDPPGDLRIRVGYFPPGKHEVEVRDCDFLFLRTR GVCMLYDSRGLPEDREGAFHLARWWEKFSMAYAALCLREGVPGAVELERWLERVRNNRAVGFLVRYMNCDFNLPVVEMCV LVLSLLPMTEAVDFVLTRGVRGWGALDAMVVLDAFTLCLLALPVLCGLLLNRRAVRSGRVYECLLEGEPPHRRLLSTLCV YNPSK
Sequences:
>Translated_405_residues MGDPGASGCELPLVSRETVSRLRLAYGALCTLSAPLGLLGSDAGVMVAGLGSIVGVLLGLMRPFSFRERAPKPEHARIGT RLLYPTASFNRLRDGPKLGTALPLAMIPALILFFTMWLSTGDRTGVALTVFLLISIAATTVFSYLVKLSAAMTLGYALPV RVKPEGTRVSLASLGYCEAELVTDGNVKVSGFRELGSYPVEYGGLPGDPPGDLRIRVGYFPPGKHEVEVRDCDFLFLRTR GVCMLYDSRGLPEDREGAFHLARWWEKFSMAYAALCLREGVPGAVELERWLERVRNNRAVGFLVRYMNCDFNLPVVEMCV LVLSLLPMTEAVDFVLTRGVRGWGALDAMVVLDAFTLCLLALPVLCGLLLNRRAVRSGRVYECLLEGEPPHRRLLSTLCV YNPSK >Mature_404_residues GDPGASGCELPLVSRETVSRLRLAYGALCTLSAPLGLLGSDAGVMVAGLGSIVGVLLGLMRPFSFRERAPKPEHARIGTR LLYPTASFNRLRDGPKLGTALPLAMIPALILFFTMWLSTGDRTGVALTVFLLISIAATTVFSYLVKLSAAMTLGYALPVR VKPEGTRVSLASLGYCEAELVTDGNVKVSGFRELGSYPVEYGGLPGDPPGDLRIRVGYFPPGKHEVEVRDCDFLFLRTRG VCMLYDSRGLPEDREGAFHLARWWEKFSMAYAALCLREGVPGAVELERWLERVRNNRAVGFLVRYMNCDFNLPVVEMCVL VLSLLPMTEAVDFVLTRGVRGWGALDAMVVLDAFTLCLLALPVLCGLLLNRRAVRSGRVYECLLEGEPPHRRLLSTLCVY NPSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44307; Mature: 44176
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDPGASGCELPLVSRETVSRLRLAYGALCTLSAPLGLLGSDAGVMVAGLGSIVGVLLGL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH MRPFSFRERAPKPEHARIGTRLLYPTASFNRLRDGPKLGTALPLAMIPALILFFTMWLST HCCCCHHHCCCCCCHHHCCCEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC GDRTGVALTVFLLISIAATTVFSYLVKLSAAMTLGYALPVRVKPEGTRVSLASLGYCEAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEHHHCCCCEEE LVTDGNVKVSGFRELGSYPVEYGGLPGDPPGDLRIRVGYFPPGKHEVEVRDCDFLFLRTR EEECCCEEEECHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEEECC GVCMLYDSRGLPEDREGAFHLARWWEKFSMAYAALCLREGVPGAVELERWLERVRNNRAV CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC GFLVRYMNCDFNLPVVEMCVLVLSLLPMTEAVDFVLTRGVRGWGALDAMVVLDAFTLCLL EEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ALPVLCGLLLNRRAVRSGRVYECLLEGEPPHRRLLSTLCVYNPSK HHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure GDPGASGCELPLVSRETVSRLRLAYGALCTLSAPLGLLGSDAGVMVAGLGSIVGVLLGL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH MRPFSFRERAPKPEHARIGTRLLYPTASFNRLRDGPKLGTALPLAMIPALILFFTMWLST HCCCCHHHCCCCCCHHHCCCEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC GDRTGVALTVFLLISIAATTVFSYLVKLSAAMTLGYALPVRVKPEGTRVSLASLGYCEAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEHHHCCCCEEE LVTDGNVKVSGFRELGSYPVEYGGLPGDPPGDLRIRVGYFPPGKHEVEVRDCDFLFLRTR EEECCCEEEECHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEEECC GVCMLYDSRGLPEDREGAFHLARWWEKFSMAYAALCLREGVPGAVELERWLERVRNNRAV CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC GFLVRYMNCDFNLPVVEMCVLVLSLLPMTEAVDFVLTRGVRGWGALDAMVVLDAFTLCLL EEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ALPVLCGLLLNRRAVRSGRVYECLLEGEPPHRRLLSTLCVYNPSK HHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA