Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094576

Identifier: 20094576

GI number: 20094576

Start: 1117134

End: 1117373

Strand: Reverse

Name: 20094576

Synonym: MK1140

Alternate gene names: NA

Gene position: 1117373-1117134 (Counterclockwise)

Preceding gene: 20094577

Following gene: 20094573

Centisome position: 65.92

GC content: 69.58

Gene sequence:

>240_bases
GTGATCCCCGCGGTCGTCGGGACGGGCGTGGGCGCGGCGACAGTCCTCGGGTCGTTGCCGCCGTACTGCGGGTGGCTCGC
GCCGGCCGCGATGCTGACGGGTTTCCTCCTGACGCTCAAATACGAGAGGTGGGTGCGCGATCACCGGATCGTCACGGTGT
GGGGTCGGGTCGTCGAGACCGTGCGGTACTACCCGTGGCCGTCACGTTCGACGAGGAGTGCGCCCGGAGGTGGACCATGA

Upstream 100 bases:

>100_bases
TCGAGCTCGTGTCCACGTTCGCCGGGTTGCTGGTGTTCTCGTACCGTTCGGACGTCGCGACGCTACTACCGGGGTTCCGA
AGCCCGCGCTCCCGAGGTTC

Downstream 100 bases:

>100_bases
ACAGGATCGTCCTCCACACGTGGGAGGAGTGGGCGGGGCTGAAGGAGTACCGACCACCCGGGTCACGGTCGTGAGGCCGG
TCCGTGGTCCCTCTCCACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MIPAVVGTGVGAATVLGSLPPYCGWLAPAAMLTGFLLTLKYERWVRDHRIVTVWGRVVETVRYYPWPSRSTRSAPGGGP

Sequences:

>Translated_79_residues
MIPAVVGTGVGAATVLGSLPPYCGWLAPAAMLTGFLLTLKYERWVRDHRIVTVWGRVVETVRYYPWPSRSTRSAPGGGP
>Mature_79_residues
MIPAVVGTGVGAATVLGSLPPYCGWLAPAAMLTGFLLTLKYERWVRDHRIVTVWGRVVETVRYYPWPSRSTRSAPGGGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8571; Mature: 8571

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPAVVGTGVGAATVLGSLPPYCGWLAPAAMLTGFLLTLKYERWVRDHRIVTVWGRVVET
CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VRYYPWPSRSTRSAPGGGP
HHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIPAVVGTGVGAATVLGSLPPYCGWLAPAAMLTGFLLTLKYERWVRDHRIVTVWGRVVET
CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VRYYPWPSRSTRSAPGGGP
HHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA