Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094573

Identifier: 20094573

GI number: 20094573

Start: 1116295

End: 1116663

Strand: Reverse

Name: 20094573

Synonym: MK1137

Alternate gene names: NA

Gene position: 1116663-1116295 (Counterclockwise)

Preceding gene: 20094576

Following gene: 20094569

Centisome position: 65.88

GC content: 68.29

Gene sequence:

>369_bases
GTGTCGGGTCGCGACTTATACGTCCTCGAGGCCCGGATCAACCGCCGGAACTACCGGGAGTTCGTGTCGCGGTGGCGTGA
GTGGGGCGAGCGGATCGCGAGGGTCGCCCGGCGTCTCCTCGGCGAGGGGACCCGCGTGTTCGTGTTCGGGAGTGCGGTCA
AGGGCGAGGCGCTCCCGGGGAGCGACCTGGACGTGCTGATCGTGTCCGACGGAGTCCCGGAGGACCTGGAGGACCGCGTG
GACCTGATCCGCGAGTTCGAGAGGGAGCTCGACCTCCCGGAGCGTCACCCGATCGAGTTCCACCTCGCCACCCCGGAGGA
GTACGAGGAGGTCTGGAGGGTGCTCCTCGACGAGTACGAGGAGTTCTGA

Upstream 100 bases:

>100_bases
TTACCGCGTCCCAGGAGCCACCGCGCGGCCTCCAGCGACCCCTCGGCGCGCTCCAGAAGCTTCTTCCTCAGCCTGCGCAT
CGGGAGACCCGGGGCTCACC

Downstream 100 bases:

>100_bases
CCGGTGCCGCCGTCGGGAGGTCGATGCGGTCAGTGTCCGGATCACCCGTGCCGGAGTTTCCAGCGTTCCAGCTCGAGCTC
CACGTCGGGTACCTCGTGCC

Product: DNA polymerase beta family nucleotidyltransferase

Products: NA

Alternate protein names: DNA Polymerase Beta Subunit; DNA Polymerase Beta Domain Protein Region

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MSGRDLYVLEARINRRNYREFVSRWREWGERIARVARRLLGEGTRVFVFGSAVKGEALPGSDLDVLIVSDGVPEDLEDRV
DLIREFERELDLPERHPIEFHLATPEEYEEVWRVLLDEYEEF

Sequences:

>Translated_122_residues
MSGRDLYVLEARINRRNYREFVSRWREWGERIARVARRLLGEGTRVFVFGSAVKGEALPGSDLDVLIVSDGVPEDLEDRV
DLIREFERELDLPERHPIEFHLATPEEYEEVWRVLLDEYEEF
>Mature_121_residues
SGRDLYVLEARINRRNYREFVSRWREWGERIARVARRLLGEGTRVFVFGSAVKGEALPGSDLDVLIVSDGVPEDLEDRVD
LIREFERELDLPERHPIEFHLATPEEYEEVWRVLLDEYEEF

Specific function: Unknown

COG id: COG1708

COG function: function code R; Predicted nucleotidyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14493; Mature: 14362

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRDLYVLEARINRRNYREFVSRWREWGERIARVARRLLGEGTRVFVFGSAVKGEALPG
CCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
SDLDVLIVSDGVPEDLEDRVDLIREFERELDLPERHPIEFHLATPEEYEEVWRVLLDEYE
CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH
EF
CC
>Mature Secondary Structure 
SGRDLYVLEARINRRNYREFVSRWREWGERIARVARRLLGEGTRVFVFGSAVKGEALPG
CCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
SDLDVLIVSDGVPEDLEDRVDLIREFERELDLPERHPIEFHLATPEEYEEVWRVLLDEYE
CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH
EF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA