| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094573
Identifier: 20094573
GI number: 20094573
Start: 1116295
End: 1116663
Strand: Reverse
Name: 20094573
Synonym: MK1137
Alternate gene names: NA
Gene position: 1116663-1116295 (Counterclockwise)
Preceding gene: 20094576
Following gene: 20094569
Centisome position: 65.88
GC content: 68.29
Gene sequence:
>369_bases GTGTCGGGTCGCGACTTATACGTCCTCGAGGCCCGGATCAACCGCCGGAACTACCGGGAGTTCGTGTCGCGGTGGCGTGA GTGGGGCGAGCGGATCGCGAGGGTCGCCCGGCGTCTCCTCGGCGAGGGGACCCGCGTGTTCGTGTTCGGGAGTGCGGTCA AGGGCGAGGCGCTCCCGGGGAGCGACCTGGACGTGCTGATCGTGTCCGACGGAGTCCCGGAGGACCTGGAGGACCGCGTG GACCTGATCCGCGAGTTCGAGAGGGAGCTCGACCTCCCGGAGCGTCACCCGATCGAGTTCCACCTCGCCACCCCGGAGGA GTACGAGGAGGTCTGGAGGGTGCTCCTCGACGAGTACGAGGAGTTCTGA
Upstream 100 bases:
>100_bases TTACCGCGTCCCAGGAGCCACCGCGCGGCCTCCAGCGACCCCTCGGCGCGCTCCAGAAGCTTCTTCCTCAGCCTGCGCAT CGGGAGACCCGGGGCTCACC
Downstream 100 bases:
>100_bases CCGGTGCCGCCGTCGGGAGGTCGATGCGGTCAGTGTCCGGATCACCCGTGCCGGAGTTTCCAGCGTTCCAGCTCGAGCTC CACGTCGGGTACCTCGTGCC
Product: DNA polymerase beta family nucleotidyltransferase
Products: NA
Alternate protein names: DNA Polymerase Beta Subunit; DNA Polymerase Beta Domain Protein Region
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSGRDLYVLEARINRRNYREFVSRWREWGERIARVARRLLGEGTRVFVFGSAVKGEALPGSDLDVLIVSDGVPEDLEDRV DLIREFERELDLPERHPIEFHLATPEEYEEVWRVLLDEYEEF
Sequences:
>Translated_122_residues MSGRDLYVLEARINRRNYREFVSRWREWGERIARVARRLLGEGTRVFVFGSAVKGEALPGSDLDVLIVSDGVPEDLEDRV DLIREFERELDLPERHPIEFHLATPEEYEEVWRVLLDEYEEF >Mature_121_residues SGRDLYVLEARINRRNYREFVSRWREWGERIARVARRLLGEGTRVFVFGSAVKGEALPGSDLDVLIVSDGVPEDLEDRVD LIREFERELDLPERHPIEFHLATPEEYEEVWRVLLDEYEEF
Specific function: Unknown
COG id: COG1708
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14493; Mature: 14362
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRDLYVLEARINRRNYREFVSRWREWGERIARVARRLLGEGTRVFVFGSAVKGEALPG CCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC SDLDVLIVSDGVPEDLEDRVDLIREFERELDLPERHPIEFHLATPEEYEEVWRVLLDEYE CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH EF CC >Mature Secondary Structure SGRDLYVLEARINRRNYREFVSRWREWGERIARVARRLLGEGTRVFVFGSAVKGEALPG CCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC SDLDVLIVSDGVPEDLEDRVDLIREFERELDLPERHPIEFHLATPEEYEEVWRVLLDEYE CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH EF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA