| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094504
Identifier: 20094504
GI number: 20094504
Start: 1035174
End: 1036619
Strand: Reverse
Name: 20094504
Synonym: MK1068
Alternate gene names: NA
Gene position: 1036619-1035174 (Counterclockwise)
Preceding gene: 20094505
Following gene: 20094495
Centisome position: 61.16
GC content: 48.55
Gene sequence:
>1446_bases CTGAAAGATGATAAAGGAGGGCGGAAGTTGTTTCGGGTCCGTAACGAGCGGCACGAGCGGTACCTGGCGGTAGCGGTCCC CCTCCTTGCAGCGGTCTTCCTCCTGACAACCTCCCCAGTGATGATGAACTGGTACGACGTCCACTACTTTGAGGAGTGGT ACCGTGTCGCGATGTCTAAAGGCCTACTACACGTCTACCCAGAGTGCGAAAAAGTACACTACCCACCGATGGCCGTAGTC TTTTACATAACCACGCGCGACCTCATCCACAACCTAGGTTTAGACTCCAACCCATGGACGTTCCAATTTTCTCTTAAGAT ATTTTTAGTCGCATTCTACCTGCTTACATGCCTAGTAATAATTCGGGAGTTCGAGTGGCCGATCGCTCAGTGGGGAGTCA TATCAGTACCTATGGGTATGGTTGTGTGGGGTTATCAGTTCGATACTATTATCGCGTTCTTCCTAGCACTCACTGCTGTA TGCGTACGCCGTGGTCGACCCATCGCCGCTGGAGTCTCCTTAGCTTTAGCTTCTAGTTTCAAGTATGTGCCCGGAATACT CGTAATTCCGTTCACTCTTATCCTCAAAGAAAAGTACGGTTCACGCCCAGCAAAGATATTTTTCTTAACCTCTGCAATCA CAGTAGCTTTACTCTGGTCACCCTTTATACTGTACGATCCAGAAGCCTTTTGGAAACAAGCATTCCTATTTCATATGCTT AGACTCCCTCAAGATCTTACCCCTCTAAACATCCCATTACTCCTAACTAGATGGCACGTTTACCCCTATCACTTCATTAT AGGGAAGCTATCGGGACCACTTATAATTCTCGGATTTGTAACTCTAGCTTTGTGGCTTTGGAAACGTCGTGAAATCCTAC AAGAATCCATTAGAACATCTGGCTTGAAACACACTATTTGGGGCTCCGCAGCTCTGTTCATGTTATGGTTTGCCCTAACT ACCAAAGTAGGAAACCCCTACTATATCGCCTGGATCTACCTATGGGTATTCCCATTCGCCGTCTGGTTGCTGCCATCATG GTGTGTCGGGTTCCTCAACACTGCCCCGTTTCTCCTCGCACTCAGCAGACTTCCTGCCGCTGTATGTAACGCTCCTGTAT TCGTACCGGAAGATGTACGGTGGTATCCAGCACTTCAACTACTGGGCTTTTCCACACCATTAGCTGTAGAGAAGGCCCAT CAGCTGTACTTGGCCGCACCTAATTTCATGCGATTGTGGTACTACCATATGCATCAGACAGAACTAGTACTCGTCGTCGT ATACACAATCGTAGTTACGAAAACACTGCTAGATCTATTGAAGTGGATAAGGGATCCGAAACCAGCCGATGAGCGTCCTC ACGATTGGGCTATCCACCCGATGCTCCTCGCATTCACTCTGCCCGCCTACATCTTCGCACTCTACATCGCACTACCGATC GGCTAG
Upstream 100 bases:
>100_bases GAGATAGTACCGATAGAGCTCGAAGAAGACGAGATGAGAGCGTTCAGACGGTCGGTTAAAGTCGTTAAGGAGGCTACGAG AGAGGCGATGGAAGCGATTT
Downstream 100 bases:
>100_bases TGCTCCACCGCACAGAACATCGCCTTGAGGTATCTGGTGTCTGGGTTCCCAGGTACTATCGGATGGCACGGGGGTTGGCC CCGCAGCGGACCGAGCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MKDDKGGRKLFRVRNERHERYLAVAVPLLAAVFLLTTSPVMMNWYDVHYFEEWYRVAMSKGLLHVYPECEKVHYPPMAVV FYITTRDLIHNLGLDSNPWTFQFSLKIFLVAFYLLTCLVIIREFEWPIAQWGVISVPMGMVVWGYQFDTIIAFFLALTAV CVRRGRPIAAGVSLALASSFKYVPGILVIPFTLILKEKYGSRPAKIFFLTSAITVALLWSPFILYDPEAFWKQAFLFHML RLPQDLTPLNIPLLLTRWHVYPYHFIIGKLSGPLIILGFVTLALWLWKRREILQESIRTSGLKHTIWGSAALFMLWFALT TKVGNPYYIAWIYLWVFPFAVWLLPSWCVGFLNTAPFLLALSRLPAAVCNAPVFVPEDVRWYPALQLLGFSTPLAVEKAH QLYLAAPNFMRLWYYHMHQTELVLVVVYTIVVTKTLLDLLKWIRDPKPADERPHDWAIHPMLLAFTLPAYIFALYIALPI G
Sequences:
>Translated_481_residues MKDDKGGRKLFRVRNERHERYLAVAVPLLAAVFLLTTSPVMMNWYDVHYFEEWYRVAMSKGLLHVYPECEKVHYPPMAVV FYITTRDLIHNLGLDSNPWTFQFSLKIFLVAFYLLTCLVIIREFEWPIAQWGVISVPMGMVVWGYQFDTIIAFFLALTAV CVRRGRPIAAGVSLALASSFKYVPGILVIPFTLILKEKYGSRPAKIFFLTSAITVALLWSPFILYDPEAFWKQAFLFHML RLPQDLTPLNIPLLLTRWHVYPYHFIIGKLSGPLIILGFVTLALWLWKRREILQESIRTSGLKHTIWGSAALFMLWFALT TKVGNPYYIAWIYLWVFPFAVWLLPSWCVGFLNTAPFLLALSRLPAAVCNAPVFVPEDVRWYPALQLLGFSTPLAVEKAH QLYLAAPNFMRLWYYHMHQTELVLVVVYTIVVTKTLLDLLKWIRDPKPADERPHDWAIHPMLLAFTLPAYIFALYIALPI G >Mature_481_residues MKDDKGGRKLFRVRNERHERYLAVAVPLLAAVFLLTTSPVMMNWYDVHYFEEWYRVAMSKGLLHVYPECEKVHYPPMAVV FYITTRDLIHNLGLDSNPWTFQFSLKIFLVAFYLLTCLVIIREFEWPIAQWGVISVPMGMVVWGYQFDTIIAFFLALTAV CVRRGRPIAAGVSLALASSFKYVPGILVIPFTLILKEKYGSRPAKIFFLTSAITVALLWSPFILYDPEAFWKQAFLFHML RLPQDLTPLNIPLLLTRWHVYPYHFIIGKLSGPLIILGFVTLALWLWKRREILQESIRTSGLKHTIWGSAALFMLWFALT TKVGNPYYIAWIYLWVFPFAVWLLPSWCVGFLNTAPFLLALSRLPAAVCNAPVFVPEDVRWYPALQLLGFSTPLAVEKAH QLYLAAPNFMRLWYYHMHQTELVLVVVYTIVVTKTLLDLLKWIRDPKPADERPHDWAIHPMLLAFTLPAYIFALYIALPI G
Specific function: Unknown
COG id: COG5650
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55680; Mature: 55680
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDDKGGRKLFRVRNERHERYLAVAVPLLAAVFLLTTSPVMMNWYDVHYFEEWYRVAMSK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHC GLLHVYPECEKVHYPPMAVVFYITTRDLIHNLGLDSNPWTFQFSLKIFLVAFYLLTCLVI CCEEECCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHH IREFEWPIAQWGVISVPMGMVVWGYQFDTIIAFFLALTAVCVRRGRPIAAGVSLALASSF HHHCCCCHHHCCHHCCCHHHHEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC KYVPGILVIPFTLILKEKYGSRPAKIFFLTSAITVALLWSPFILYDPEAFWKQAFLFHML CCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHH RLPQDLTPLNIPLLLTRWHVYPYHFIIGKLSGPLIILGFVTLALWLWKRREILQESIRTS HCCCCCCCCCCCCEEEEHHHCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GLKHTIWGSAALFMLWFALTTKVGNPYYIAWIYLWVFPFAVWLLPSWCVGFLNTAPFLLA CCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSRLPAAVCNAPVFVPEDVRWYPALQLLGFSTPLAVEKAHQLYLAAPNFMRLWYYHMHQT HHHCCHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHEEEECCHHHHHHHHHHCCH ELVLVVVYTIVVTKTLLDLLKWIRDPKPADERPHDWAIHPMLLAFTLPAYIFALYIALPI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC G C >Mature Secondary Structure MKDDKGGRKLFRVRNERHERYLAVAVPLLAAVFLLTTSPVMMNWYDVHYFEEWYRVAMSK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHC GLLHVYPECEKVHYPPMAVVFYITTRDLIHNLGLDSNPWTFQFSLKIFLVAFYLLTCLVI CCEEECCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHH IREFEWPIAQWGVISVPMGMVVWGYQFDTIIAFFLALTAVCVRRGRPIAAGVSLALASSF HHHCCCCHHHCCHHCCCHHHHEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC KYVPGILVIPFTLILKEKYGSRPAKIFFLTSAITVALLWSPFILYDPEAFWKQAFLFHML CCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHH RLPQDLTPLNIPLLLTRWHVYPYHFIIGKLSGPLIILGFVTLALWLWKRREILQESIRTS HCCCCCCCCCCCCEEEEHHHCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GLKHTIWGSAALFMLWFALTTKVGNPYYIAWIYLWVFPFAVWLLPSWCVGFLNTAPFLLA CCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSRLPAAVCNAPVFVPEDVRWYPALQLLGFSTPLAVEKAHQLYLAAPNFMRLWYYHMHQT HHHCCHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHEEEECCHHHHHHHHHHCCH ELVLVVVYTIVVTKTLLDLLKWIRDPKPADERPHDWAIHPMLLAFTLPAYIFALYIALPI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA