Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094504

Identifier: 20094504

GI number: 20094504

Start: 1035174

End: 1036619

Strand: Reverse

Name: 20094504

Synonym: MK1068

Alternate gene names: NA

Gene position: 1036619-1035174 (Counterclockwise)

Preceding gene: 20094505

Following gene: 20094495

Centisome position: 61.16

GC content: 48.55

Gene sequence:

>1446_bases
CTGAAAGATGATAAAGGAGGGCGGAAGTTGTTTCGGGTCCGTAACGAGCGGCACGAGCGGTACCTGGCGGTAGCGGTCCC
CCTCCTTGCAGCGGTCTTCCTCCTGACAACCTCCCCAGTGATGATGAACTGGTACGACGTCCACTACTTTGAGGAGTGGT
ACCGTGTCGCGATGTCTAAAGGCCTACTACACGTCTACCCAGAGTGCGAAAAAGTACACTACCCACCGATGGCCGTAGTC
TTTTACATAACCACGCGCGACCTCATCCACAACCTAGGTTTAGACTCCAACCCATGGACGTTCCAATTTTCTCTTAAGAT
ATTTTTAGTCGCATTCTACCTGCTTACATGCCTAGTAATAATTCGGGAGTTCGAGTGGCCGATCGCTCAGTGGGGAGTCA
TATCAGTACCTATGGGTATGGTTGTGTGGGGTTATCAGTTCGATACTATTATCGCGTTCTTCCTAGCACTCACTGCTGTA
TGCGTACGCCGTGGTCGACCCATCGCCGCTGGAGTCTCCTTAGCTTTAGCTTCTAGTTTCAAGTATGTGCCCGGAATACT
CGTAATTCCGTTCACTCTTATCCTCAAAGAAAAGTACGGTTCACGCCCAGCAAAGATATTTTTCTTAACCTCTGCAATCA
CAGTAGCTTTACTCTGGTCACCCTTTATACTGTACGATCCAGAAGCCTTTTGGAAACAAGCATTCCTATTTCATATGCTT
AGACTCCCTCAAGATCTTACCCCTCTAAACATCCCATTACTCCTAACTAGATGGCACGTTTACCCCTATCACTTCATTAT
AGGGAAGCTATCGGGACCACTTATAATTCTCGGATTTGTAACTCTAGCTTTGTGGCTTTGGAAACGTCGTGAAATCCTAC
AAGAATCCATTAGAACATCTGGCTTGAAACACACTATTTGGGGCTCCGCAGCTCTGTTCATGTTATGGTTTGCCCTAACT
ACCAAAGTAGGAAACCCCTACTATATCGCCTGGATCTACCTATGGGTATTCCCATTCGCCGTCTGGTTGCTGCCATCATG
GTGTGTCGGGTTCCTCAACACTGCCCCGTTTCTCCTCGCACTCAGCAGACTTCCTGCCGCTGTATGTAACGCTCCTGTAT
TCGTACCGGAAGATGTACGGTGGTATCCAGCACTTCAACTACTGGGCTTTTCCACACCATTAGCTGTAGAGAAGGCCCAT
CAGCTGTACTTGGCCGCACCTAATTTCATGCGATTGTGGTACTACCATATGCATCAGACAGAACTAGTACTCGTCGTCGT
ATACACAATCGTAGTTACGAAAACACTGCTAGATCTATTGAAGTGGATAAGGGATCCGAAACCAGCCGATGAGCGTCCTC
ACGATTGGGCTATCCACCCGATGCTCCTCGCATTCACTCTGCCCGCCTACATCTTCGCACTCTACATCGCACTACCGATC
GGCTAG

Upstream 100 bases:

>100_bases
GAGATAGTACCGATAGAGCTCGAAGAAGACGAGATGAGAGCGTTCAGACGGTCGGTTAAAGTCGTTAAGGAGGCTACGAG
AGAGGCGATGGAAGCGATTT

Downstream 100 bases:

>100_bases
TGCTCCACCGCACAGAACATCGCCTTGAGGTATCTGGTGTCTGGGTTCCCAGGTACTATCGGATGGCACGGGGGTTGGCC
CCGCAGCGGACCGAGCATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MKDDKGGRKLFRVRNERHERYLAVAVPLLAAVFLLTTSPVMMNWYDVHYFEEWYRVAMSKGLLHVYPECEKVHYPPMAVV
FYITTRDLIHNLGLDSNPWTFQFSLKIFLVAFYLLTCLVIIREFEWPIAQWGVISVPMGMVVWGYQFDTIIAFFLALTAV
CVRRGRPIAAGVSLALASSFKYVPGILVIPFTLILKEKYGSRPAKIFFLTSAITVALLWSPFILYDPEAFWKQAFLFHML
RLPQDLTPLNIPLLLTRWHVYPYHFIIGKLSGPLIILGFVTLALWLWKRREILQESIRTSGLKHTIWGSAALFMLWFALT
TKVGNPYYIAWIYLWVFPFAVWLLPSWCVGFLNTAPFLLALSRLPAAVCNAPVFVPEDVRWYPALQLLGFSTPLAVEKAH
QLYLAAPNFMRLWYYHMHQTELVLVVVYTIVVTKTLLDLLKWIRDPKPADERPHDWAIHPMLLAFTLPAYIFALYIALPI
G

Sequences:

>Translated_481_residues
MKDDKGGRKLFRVRNERHERYLAVAVPLLAAVFLLTTSPVMMNWYDVHYFEEWYRVAMSKGLLHVYPECEKVHYPPMAVV
FYITTRDLIHNLGLDSNPWTFQFSLKIFLVAFYLLTCLVIIREFEWPIAQWGVISVPMGMVVWGYQFDTIIAFFLALTAV
CVRRGRPIAAGVSLALASSFKYVPGILVIPFTLILKEKYGSRPAKIFFLTSAITVALLWSPFILYDPEAFWKQAFLFHML
RLPQDLTPLNIPLLLTRWHVYPYHFIIGKLSGPLIILGFVTLALWLWKRREILQESIRTSGLKHTIWGSAALFMLWFALT
TKVGNPYYIAWIYLWVFPFAVWLLPSWCVGFLNTAPFLLALSRLPAAVCNAPVFVPEDVRWYPALQLLGFSTPLAVEKAH
QLYLAAPNFMRLWYYHMHQTELVLVVVYTIVVTKTLLDLLKWIRDPKPADERPHDWAIHPMLLAFTLPAYIFALYIALPI
G
>Mature_481_residues
MKDDKGGRKLFRVRNERHERYLAVAVPLLAAVFLLTTSPVMMNWYDVHYFEEWYRVAMSKGLLHVYPECEKVHYPPMAVV
FYITTRDLIHNLGLDSNPWTFQFSLKIFLVAFYLLTCLVIIREFEWPIAQWGVISVPMGMVVWGYQFDTIIAFFLALTAV
CVRRGRPIAAGVSLALASSFKYVPGILVIPFTLILKEKYGSRPAKIFFLTSAITVALLWSPFILYDPEAFWKQAFLFHML
RLPQDLTPLNIPLLLTRWHVYPYHFIIGKLSGPLIILGFVTLALWLWKRREILQESIRTSGLKHTIWGSAALFMLWFALT
TKVGNPYYIAWIYLWVFPFAVWLLPSWCVGFLNTAPFLLALSRLPAAVCNAPVFVPEDVRWYPALQLLGFSTPLAVEKAH
QLYLAAPNFMRLWYYHMHQTELVLVVVYTIVVTKTLLDLLKWIRDPKPADERPHDWAIHPMLLAFTLPAYIFALYIALPI
G

Specific function: Unknown

COG id: COG5650

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55680; Mature: 55680

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDDKGGRKLFRVRNERHERYLAVAVPLLAAVFLLTTSPVMMNWYDVHYFEEWYRVAMSK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHC
GLLHVYPECEKVHYPPMAVVFYITTRDLIHNLGLDSNPWTFQFSLKIFLVAFYLLTCLVI
CCEEECCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
IREFEWPIAQWGVISVPMGMVVWGYQFDTIIAFFLALTAVCVRRGRPIAAGVSLALASSF
HHHCCCCHHHCCHHCCCHHHHEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
KYVPGILVIPFTLILKEKYGSRPAKIFFLTSAITVALLWSPFILYDPEAFWKQAFLFHML
CCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHH
RLPQDLTPLNIPLLLTRWHVYPYHFIIGKLSGPLIILGFVTLALWLWKRREILQESIRTS
HCCCCCCCCCCCCEEEEHHHCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GLKHTIWGSAALFMLWFALTTKVGNPYYIAWIYLWVFPFAVWLLPSWCVGFLNTAPFLLA
CCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRLPAAVCNAPVFVPEDVRWYPALQLLGFSTPLAVEKAHQLYLAAPNFMRLWYYHMHQT
HHHCCHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHEEEECCHHHHHHHHHHCCH
ELVLVVVYTIVVTKTLLDLLKWIRDPKPADERPHDWAIHPMLLAFTLPAYIFALYIALPI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
G
C
>Mature Secondary Structure
MKDDKGGRKLFRVRNERHERYLAVAVPLLAAVFLLTTSPVMMNWYDVHYFEEWYRVAMSK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHC
GLLHVYPECEKVHYPPMAVVFYITTRDLIHNLGLDSNPWTFQFSLKIFLVAFYLLTCLVI
CCEEECCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
IREFEWPIAQWGVISVPMGMVVWGYQFDTIIAFFLALTAVCVRRGRPIAAGVSLALASSF
HHHCCCCHHHCCHHCCCHHHHEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
KYVPGILVIPFTLILKEKYGSRPAKIFFLTSAITVALLWSPFILYDPEAFWKQAFLFHML
CCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHH
RLPQDLTPLNIPLLLTRWHVYPYHFIIGKLSGPLIILGFVTLALWLWKRREILQESIRTS
HCCCCCCCCCCCCEEEEHHHCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GLKHTIWGSAALFMLWFALTTKVGNPYYIAWIYLWVFPFAVWLLPSWCVGFLNTAPFLLA
CCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRLPAAVCNAPVFVPEDVRWYPALQLLGFSTPLAVEKAHQLYLAAPNFMRLWYYHMHQT
HHHCCHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHEEEECCHHHHHHHHHHCCH
ELVLVVVYTIVVTKTLLDLLKWIRDPKPADERPHDWAIHPMLLAFTLPAYIFALYIALPI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA