Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094502

Identifier: 20094502

GI number: 20094502

Start: 1033579

End: 1033920

Strand: Direct

Name: 20094502

Synonym: MK1066

Alternate gene names: NA

Gene position: 1033579-1033920 (Clockwise)

Preceding gene: 20094501

Following gene: 20094503

Centisome position: 60.98

GC content: 64.04

Gene sequence:

>342_bases
GTGGGCCTAGCAGGGTACCTACCGGTGGAACTGTGCCGGTTCGTGCGCAACCCCGACCCGAACACGTCCGGTAAGCGCGC
CGAGCAGCTAGTACGACGATACGGTCCGTACTTGGGCGTGCTGACGGTTATGGTGCTCTTCGGATCCTACATCACCCTCG
CCACGATGGCGGTCGCGGGACTCGGTGGTGATCGGCGAGCCCACCTCTCGGCCTTGGCAGGTTCCATGCTGCTCGCCCTG
CTGGGGTACGGTGCGACCCACACGACGTTAAGGGCGCTGCAGCCGTGGTTAATGGGTCAGGAGTGGGGGGAAGAACTGCT
CCGACGGTTCGGTATACGCTGA

Upstream 100 bases:

>100_bases
CGGGACCACCGCCCTAATCGCGGCGAGTCCCATCGGCCACTGGCCCGCGATCGCCTACGGGCTCGCCCACGGCCTTCCCG
CCCCCCTGGTTATCGTGGTA

Downstream 100 bases:

>100_bases
GGTGCTACGAAGGGGGGAGTAACCGTCAGACGAGACGTCCCCTCCATGGTGGTCGATAAGCACGCTCGGGACGCAATTCG
GTCGGGAGCCCTCTCGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MGLAGYLPVELCRFVRNPDPNTSGKRAEQLVRRYGPYLGVLTVMVLFGSYITLATMAVAGLGGDRRAHLSALAGSMLLAL
LGYGATHTTLRALQPWLMGQEWGEELLRRFGIR

Sequences:

>Translated_113_residues
MGLAGYLPVELCRFVRNPDPNTSGKRAEQLVRRYGPYLGVLTVMVLFGSYITLATMAVAGLGGDRRAHLSALAGSMLLAL
LGYGATHTTLRALQPWLMGQEWGEELLRRFGIR
>Mature_112_residues
GLAGYLPVELCRFVRNPDPNTSGKRAEQLVRRYGPYLGVLTVMVLFGSYITLATMAVAGLGGDRRAHLSALAGSMLLALL
GYGATHTTLRALQPWLMGQEWGEELLRRFGIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12379; Mature: 12248

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLAGYLPVELCRFVRNPDPNTSGKRAEQLVRRYGPYLGVLTVMVLFGSYITLATMAVAG
CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
LGGDRRAHLSALAGSMLLALLGYGATHTTLRALQPWLMGQEWGEELLRRFGIR
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
GLAGYLPVELCRFVRNPDPNTSGKRAEQLVRRYGPYLGVLTVMVLFGSYITLATMAVAG
CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
LGGDRRAHLSALAGSMLLALLGYGATHTTLRALQPWLMGQEWGEELLRRFGIR
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA