| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is hisC2 [H]
Identifier: 20094460
GI number: 20094460
Start: 985790
End: 986929
Strand: Reverse
Name: hisC2 [H]
Synonym: MK1024
Alternate gene names: 20094460
Gene position: 986929-985790 (Counterclockwise)
Preceding gene: 20094467
Following gene: 20094459
Centisome position: 58.23
GC content: 59.65
Gene sequence:
>1140_bases GTGGGGCCGGTGTCAGCCGACTGGATTCCCGATTCACCGGACGAACTATTCCGGAAGATACATTCCGGCGAGGTGATAGA GCTCGGCCAGAACACCAATCGACTGGGACCCCCCGAGGAGGTCCGTAGAGCGGTCGTGCGCGCCGCACTGGAGGCACCGT ACAACGTGTACGCACACCCGCAGGGCGACCGGCGACTTCGAGAGGGACTCCTGGAGTACTTCGAACTCGACGACGATTTC GACGCCGTGATCACCAACGGCGCCATCGAGGGCGTCCACGCCGTCATCAGGGCGTTCGCCAGCAACGGTGTGGCCGTGAC TCCGGATCCAGGGTACAAGACGATCGACGGTATGATGATGGCGGAGGGAGTTCACGTCCAAGAGGTCGACATATACTCCG AGGAGTTCGACTATCAGATGACGGTAGACGCCGTGATGGAGGAGTTCGATGGTAACCTCCGGGAGCTCGATCTCATTTTC GTAATAAACCCTTCCAACCCGCTCGGCAGCTCCATGTCCGAGCGGGAGCTCCGGGGTCTCGTGGAGCTCGCCCAAGATGC GGACGCATTCCTGGTACACGACTGCACGTACAGGGACTTCGCTCCGGAGCAACCAGTAGCCTGCGAGATGGACCCGGAAC GCTGCGTCGACCTGTACAGTTTCTCCAAGACGTACGGACTCGCCGGCCTTCGGATCGGAGCCGTGATCGGAGAGCGGAAA CTGCTGGAGCAGGTATCCAAGTACAAGGTGAGCAAGTTAGGGATAAACCTGATAGCTCAGGAGGCCGCCATCACCGCCTT GAAGGTTCGCGATCGATGGATCCCGAGACTGCTCAGGGAGGTCACGCGGAACCAGCGTCTGATCAAGCGCGAGTGTGAGG GAGACGGAGTGAAGATACCGGTGTACCCCTCGCACGCCAACTGTCTCGTGATCGACTTCTCCGAGTACGGGTATATCGAC TCGAAAACCGTCGTGGGTAAACTGTACTCCGAGCACGGTATCTTCGTGAGGACGGGCTACTATACCAGCCCACGCCGCGG TAAGGGGTTCATCCGAGTGGCGTTTTCGGCCCCACGGGAGGACATAGAGCGGTTCTGTGAGGCCTTCAACGAGGTTATGG GGGAGTTGATCAAGTCGTGA
Upstream 100 bases:
>100_bases AGTTCCAAGATGTCACGGGCGCGGCCGCTGAGGCGCGATCTCGATACCCCCAATACCTTTCGGTATTTACACAAAAGTCT GGCGGTCTAAAGTCCTCGGG
Downstream 100 bases:
>100_bases GCTCTGAGATCGTTCTGGAGCACGATGTGCTTACCGCGCTTCGTGAGGGCGGTCTCAAAACGCCACGCTTCACCGTCCTC GAGCGCCCCGAGGAGGCCTC
Product: aspartate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 2 [H]
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MGPVSADWIPDSPDELFRKIHSGEVIELGQNTNRLGPPEEVRRAVVRAALEAPYNVYAHPQGDRRLREGLLEYFELDDDF DAVITNGAIEGVHAVIRAFASNGVAVTPDPGYKTIDGMMMAEGVHVQEVDIYSEEFDYQMTVDAVMEEFDGNLRELDLIF VINPSNPLGSSMSERELRGLVELAQDADAFLVHDCTYRDFAPEQPVACEMDPERCVDLYSFSKTYGLAGLRIGAVIGERK LLEQVSKYKVSKLGINLIAQEAAITALKVRDRWIPRLLREVTRNQRLIKRECEGDGVKIPVYPSHANCLVIDFSEYGYID SKTVVGKLYSEHGIFVRTGYYTSPRRGKGFIRVAFSAPREDIERFCEAFNEVMGELIKS
Sequences:
>Translated_379_residues MGPVSADWIPDSPDELFRKIHSGEVIELGQNTNRLGPPEEVRRAVVRAALEAPYNVYAHPQGDRRLREGLLEYFELDDDF DAVITNGAIEGVHAVIRAFASNGVAVTPDPGYKTIDGMMMAEGVHVQEVDIYSEEFDYQMTVDAVMEEFDGNLRELDLIF VINPSNPLGSSMSERELRGLVELAQDADAFLVHDCTYRDFAPEQPVACEMDPERCVDLYSFSKTYGLAGLRIGAVIGERK LLEQVSKYKVSKLGINLIAQEAAITALKVRDRWIPRLLREVTRNQRLIKRECEGDGVKIPVYPSHANCLVIDFSEYGYID SKTVVGKLYSEHGIFVRTGYYTSPRRGKGFIRVAFSAPREDIERFCEAFNEVMGELIKS >Mature_378_residues GPVSADWIPDSPDELFRKIHSGEVIELGQNTNRLGPPEEVRRAVVRAALEAPYNVYAHPQGDRRLREGLLEYFELDDDFD AVITNGAIEGVHAVIRAFASNGVAVTPDPGYKTIDGMMMAEGVHVQEVDIYSEEFDYQMTVDAVMEEFDGNLRELDLIFV INPSNPLGSSMSERELRGLVELAQDADAFLVHDCTYRDFAPEQPVACEMDPERCVDLYSFSKTYGLAGLRIGAVIGERKL LEQVSKYKVSKLGINLIAQEAAITALKVRDRWIPRLLREVTRNQRLIKRECEGDGVKIPVYPSHANCLVIDFSEYGYIDS KTVVGKLYSEHGIFVRTGYYTSPRRGKGFIRVAFSAPREDIERFCEAFNEVMGELIKS
Specific function: Unknown
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788722, Length=226, Percent_Identity=27.4336283185841, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1786816, Length=306, Percent_Identity=23.8562091503268, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR004838 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 42600; Mature: 42469
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPVSADWIPDSPDELFRKIHSGEVIELGQNTNRLGPPEEVRRAVVRAALEAPYNVYAHP CCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECC QGDRRLREGLLEYFELDDDFDAVITNGAIEGVHAVIRAFASNGVAVTPDPGYKTIDGMMM CCHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCHHHCCHHH AEGVHVQEVDIYSEEFDYQMTVDAVMEEFDGNLRELDLIFVINPSNPLGSSMSERELRGL HCCCEEEEEECHHHHCCCEEEHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHHHHHH VELAQDADAFLVHDCTYRDFAPEQPVACEMDPERCVDLYSFSKTYGLAGLRIGAVIGERK HHHHHCCCEEEEEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LLEQVSKYKVSKLGINLIAQEAAITALKVRDRWIPRLLREVTRNQRLIKRECEGDGVKIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE VYPSHANCLVIDFSEYGYIDSKTVVGKLYSEHGIFVRTGYYTSPRRGKGFIRVAFSAPRE EECCCCCEEEEECHHCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEECCCHH DIERFCEAFNEVMGELIKS HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GPVSADWIPDSPDELFRKIHSGEVIELGQNTNRLGPPEEVRRAVVRAALEAPYNVYAHP CCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECC QGDRRLREGLLEYFELDDDFDAVITNGAIEGVHAVIRAFASNGVAVTPDPGYKTIDGMMM CCHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCHHHCCHHH AEGVHVQEVDIYSEEFDYQMTVDAVMEEFDGNLRELDLIFVINPSNPLGSSMSERELRGL HCCCEEEEEECHHHHCCCEEEHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHHHHHH VELAQDADAFLVHDCTYRDFAPEQPVACEMDPERCVDLYSFSKTYGLAGLRIGAVIGERK HHHHHCCCEEEEEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LLEQVSKYKVSKLGINLIAQEAAITALKVRDRWIPRLLREVTRNQRLIKRECEGDGVKIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE VYPSHANCLVIDFSEYGYIDSKTVVGKLYSEHGIFVRTGYYTSPRRGKGFIRVAFSAPRE EECCCCCEEEEECHHCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEECCCHH DIERFCEAFNEVMGELIKS HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]