| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094455
Identifier: 20094455
GI number: 20094455
Start: 982627
End: 982932
Strand: Reverse
Name: 20094455
Synonym: MK1019
Alternate gene names: NA
Gene position: 982932-982627 (Counterclockwise)
Preceding gene: 20094456
Following gene: 20094443
Centisome position: 57.99
GC content: 61.11
Gene sequence:
>306_bases GTGGCGGTCGTGATGGAGATTTCGTTCTACCCGATCGGAACCGGATCACCGAGCGTCAGTGATGAGATAGTCGAGGTAGT GAAAGCCCTGAAGGAAGCCGGGTTCGAGCCGCAGGTAGGCCCGATGGGTACCGTGGTGGAGGTGGAAACCTTCGAGGACG CTTTGGAGGCGCTCCGCGTCGCTAGGGAGGCCGCGTTACGCGTCGTGGACCGTGCCGTGTTCGTAGTCAAGATAGACGAG CGCAGGGACAAGGAGCTGACCGCGGAGGGTAAGGTGCGGTCGGTGGAACGGAAGATTCAGGAGTAG
Upstream 100 bases:
>100_bases TGGACTACGACGACGTGATCGTCGAGATCACCGGACCGCGTGGTAACTTCAATCCTTTATCCGTGCTCCCGTTGATTCTG ATGCCGAGGGGGCGGAACCC
Downstream 100 bases:
>100_bases TAAAGGTCGATAACGCGACCGAGCAGGCCGCTGAGCACACGTTCCGCGACTTCCGTGACCTCTTTGGCCTCCTCGGAGCC CGTACCGCGCGAGGCCAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MAVVMEISFYPIGTGSPSVSDEIVEVVKALKEAGFEPQVGPMGTVVEVETFEDALEALRVAREAALRVVDRAVFVVKIDE RRDKELTAEGKVRSVERKIQE
Sequences:
>Translated_101_residues MAVVMEISFYPIGTGSPSVSDEIVEVVKALKEAGFEPQVGPMGTVVEVETFEDALEALRVAREAALRVVDRAVFVVKIDE RRDKELTAEGKVRSVERKIQE >Mature_100_residues AVVMEISFYPIGTGSPSVSDEIVEVVKALKEAGFEPQVGPMGTVVEVETFEDALEALRVAREAALRVVDRAVFVVKIDER RDKELTAEGKVRSVERKIQE
Specific function: Unknown
COG id: COG0011
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0045 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002767 - InterPro: IPR016198 [H]
Pfam domain/function: PF01910 DUF77 [H]
EC number: NA
Molecular weight: Translated: 11148; Mature: 11017
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVVMEISFYPIGTGSPSVSDEIVEVVKALKEAGFEPQVGPMGTVVEVETFEDALEALRV CEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHH AREAALRVVDRAVFVVKIDERRDKELTAEGKVRSVERKIQE HHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure AVVMEISFYPIGTGSPSVSDEIVEVVKALKEAGFEPQVGPMGTVVEVETFEDALEALRV EEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHH AREAALRVVDRAVFVVKIDERRDKELTAEGKVRSVERKIQE HHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463; 12866058 [H]