| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is MhpD [C]
Identifier: 20094438
GI number: 20094438
Start: 962187
End: 962981
Strand: Direct
Name: MhpD [C]
Synonym: MK1002
Alternate gene names: 20094438
Gene position: 962187-962981 (Clockwise)
Preceding gene: 20094437
Following gene: 20094440
Centisome position: 56.77
GC content: 58.24
Gene sequence:
>795_bases TTGCGGGTAGGGACCTACCTGGTGGATGGCACCCCTCGTCCCGCCGTGTTTCTCGACGACGAGGTCCACGTCTACGACCT TCCCGTGCTCGAATTCATCGAAGTCGTCCACAGTGACGGGTTGGGTGATCTGGACTACTCTGTGTATCCGCTATCGGAGC TCAGAATAGGTCCCCCAGTTCCGCGGCCTCCTAAGATAATCTGCTTCGGACTCAACTACCGTGAGCACGTCGAGGAGTTA CGCGAAATGGGAATGGACGTCCCCAGTGAGCCCGTCATGACCATGAAGGCGCCCACCGCGGTAATCGGCCACCTGGATAC CGTTAAGTTACCGAGGGAGGCACGCAGGGTCGATCACGAGCTCGAGCTGGCCGTGGTGATCGGAGAGCGATGTCGTAAAG TGTCTCCTGAGGAGGCTCGAGACGCCGTTCTCGGGTTCACTATCATCAACGACGTGACGGCTCGTGACATAGAGAAAAGA GAGGGCCAATGGGTCCGAGCGAAGAGCTACGACACGTTCGCGCCTTTAGGACCGTGGATCGAAACCGAACTAGAGCCCGA CGGACTCGAAATGGAGCTCCGTGTTAACGGCGAGGTGCGCCAGCGTGCTACCACCGACGACATGGTTCGGGATCCGTACG AGCTGGTATCTTTCACGTCTAGGGTGATGACGCTCGAGCCCGGTGATATCATCGCTACGGGAACCCCGCCCGGTGTGGGT CCGATGGAACCGGACGATAAGATCGAGTTGGAAATCGAACGCATTGGCAGGCTCGTACATTACGTAGGACAGTGA
Upstream 100 bases:
>100_bases TGTCCCGTCGACGCCATCTCAATCAACGTCTCCTATGAGCGCTCCGGTGAGATGGAGTGAGTTTTTTCACCCACCCCACC CGCTCCGCCCGGGGCGAACG
Downstream 100 bases:
>100_bases ATACCATAGAGACCGCGTGACACCGTTTAGCGTCCCCACACAGTTTCTTTACGAACAGAAGAAGCTCCGGGGAGAACTCT CAAAGGTAGCCGCGAGGATC
Product: 2-keto-4-pentenoate hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MRVGTYLVDGTPRPAVFLDDEVHVYDLPVLEFIEVVHSDGLGDLDYSVYPLSELRIGPPVPRPPKIICFGLNYREHVEEL REMGMDVPSEPVMTMKAPTAVIGHLDTVKLPREARRVDHELELAVVIGERCRKVSPEEARDAVLGFTIINDVTARDIEKR EGQWVRAKSYDTFAPLGPWIETELEPDGLEMELRVNGEVRQRATTDDMVRDPYELVSFTSRVMTLEPGDIIATGTPPGVG PMEPDDKIELEIERIGRLVHYVGQ
Sequences:
>Translated_264_residues MRVGTYLVDGTPRPAVFLDDEVHVYDLPVLEFIEVVHSDGLGDLDYSVYPLSELRIGPPVPRPPKIICFGLNYREHVEEL REMGMDVPSEPVMTMKAPTAVIGHLDTVKLPREARRVDHELELAVVIGERCRKVSPEEARDAVLGFTIINDVTARDIEKR EGQWVRAKSYDTFAPLGPWIETELEPDGLEMELRVNGEVRQRATTDDMVRDPYELVSFTSRVMTLEPGDIIATGTPPGVG PMEPDDKIELEIERIGRLVHYVGQ >Mature_264_residues MRVGTYLVDGTPRPAVFLDDEVHVYDLPVLEFIEVVHSDGLGDLDYSVYPLSELRIGPPVPRPPKIICFGLNYREHVEEL REMGMDVPSEPVMTMKAPTAVIGHLDTVKLPREARRVDHELELAVVIGERCRKVSPEEARDAVLGFTIINDVTARDIEKR EGQWVRAKSYDTFAPLGPWIETELEPDGLEMELRVNGEVRQRATTDDMVRDPYELVSFTSRVMTLEPGDIIATGTPPGVG PMEPDDKIELEIERIGRLVHYVGQ
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAH family [H]
Homologues:
Organism=Homo sapiens, GI156231349, Length=227, Percent_Identity=39.647577092511, Blast_Score=169, Evalue=2e-42, Organism=Homo sapiens, GI40786394, Length=227, Percent_Identity=39.647577092511, Blast_Score=168, Evalue=6e-42, Organism=Homo sapiens, GI66348062, Length=195, Percent_Identity=41.5384615384615, Blast_Score=143, Evalue=1e-34, Organism=Homo sapiens, GI13654274, Length=195, Percent_Identity=41.5384615384615, Blast_Score=143, Evalue=1e-34, Organism=Homo sapiens, GI215422413, Length=195, Percent_Identity=41.5384615384615, Blast_Score=143, Evalue=1e-34, Organism=Escherichia coli, GI1787428, Length=196, Percent_Identity=37.7551020408163, Blast_Score=143, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17557057, Length=192, Percent_Identity=34.8958333333333, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6324161, Length=226, Percent_Identity=30.5309734513274, Blast_Score=111, Evalue=1e-25, Organism=Drosophila melanogaster, GI24663695, Length=220, Percent_Identity=38.1818181818182, Blast_Score=142, Evalue=3e-34, Organism=Drosophila melanogaster, GI28572127, Length=217, Percent_Identity=36.8663594470046, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI28571789, Length=204, Percent_Identity=31.3725490196078, Blast_Score=105, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: NA
Molecular weight: Translated: 29725; Mature: 29725
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVGTYLVDGTPRPAVFLDDEVHVYDLPVLEFIEVVHSDGLGDLDYSVYPLSELRIGPPV CCCCEEEECCCCCCEEEECCCEEEEECCHHHHHHHHHCCCCCCCCCEEEEHHHCCCCCCC PRPPKIICFGLNYREHVEELREMGMDVPSEPVMTMKAPTAVIGHLDTVKLPREARRVDHE CCCCEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEECCHHHHCCCCCCCCCHHHHHCCCH LELAVVIGERCRKVSPEEARDAVLGFTIINDVTARDIEKREGQWVRAKSYDTFAPLGPWI HEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCE ETELEPDGLEMELRVNGEVRQRATTDDMVRDPYELVSFTSRVMTLEPGDIIATGTPPGVG ECCCCCCCCEEEEEECCHHHHHCCHHHHHHCHHHHHHHHHHEEEECCCCEEECCCCCCCC PMEPDDKIELEIERIGRLVHYVGQ CCCCCCCEEEEHHHHHHHHHHHCC >Mature Secondary Structure MRVGTYLVDGTPRPAVFLDDEVHVYDLPVLEFIEVVHSDGLGDLDYSVYPLSELRIGPPV CCCCEEEECCCCCCEEEECCCEEEEECCHHHHHHHHHCCCCCCCCCEEEEHHHCCCCCCC PRPPKIICFGLNYREHVEELREMGMDVPSEPVMTMKAPTAVIGHLDTVKLPREARRVDHE CCCCEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEECCHHHHCCCCCCCCCHHHHHCCCH LELAVVIGERCRKVSPEEARDAVLGFTIINDVTARDIEKREGQWVRAKSYDTFAPLGPWI HEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCE ETELEPDGLEMELRVNGEVRQRATTDDMVRDPYELVSFTSRVMTLEPGDIIATGTPPGVG ECCCCCCCCEEEEEECCHHHHHCCHHHHHHCHHHHHHHHHHEEEECCCCEEECCCCCCCC PMEPDDKIELEIERIGRLVHYVGQ CCCCCCCEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]