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The map label for this gene is vhuB [H]

Identifier: 20094437

GI number: 20094437

Start: 961247

End: 962146

Strand: Direct

Name: vhuB [H]

Synonym: MK1001

Alternate gene names: 20094437

Gene position: 961247-962146 (Clockwise)

Preceding gene: 20094436

Following gene: 20094438

Centisome position: 56.71

GC content: 60.44

Gene sequence:

>900_bases
ATGCCGATCGAGATCGATATGGACTCGTGTTTGCTGTGCGAAGCGTGCGTCGCAGCGTGTCCCACGGGTGCTATCCGCCG
CGAAGATGGGGACATGAACCACTGTATCGTCTGCGGCGCCTGCGTGAAGGCCTGTCCCGTCGACGCCCTGGAGCTCGAGG
ACCTCGAGCGTGAAGTGGACGGAGAGAAAGTGGAACTCAAAAGGATAGCTTGGAAGCCCGAGGAGTGCCACAAGGAGGAT
CCACCTCAGTGCGGTGAGGTGTGCCCGCAGGAGATCATGCGGATTGAAGACGGCTATCCGGAGCTCCGCGGATTCTGCGT
CATGTGCCTCAAGTGCATGGAAACGTGTCCTATCGACGCAATCGGCATGAAGGGTGTCGTCGAGCCCAAGTCCGAGCCCC
CAGAGCATCCCGAGGATGAGGATGTCTATGTACACCCCGAACGGTGTGTCGGGTGCACATACTGCCTCCAGGTATGTCCG
ACCGACGCCATCGAAATGGTGCCGACAGATGCCGAGTTCTTCAAGGCCGAGGAGAACGAGTGGTCGCCCGTTTACGTGGA
CCCGGACACGATGGAGCTGAAGCAGGGCCGGAAGGTCGCCAAGATCGACCCGGAGAAGTGCACTGGATGTACACTGTGCG
CCCAGGTGTGTCCGTGGGGAGCCATTACGGCAGCGCGTGACGTACCGGTTCAGTCCCGCGAAGTCAAGAACGAGATCGAC
GAGGACAAGTGTGTCGGATGCGGAGTCTGTGCCGAAGTCTGTCCAGGCGACCTGATCGAGGTCGACGGTGTCGCCAAGGT
GCCGGAGAAGTGTCCCGCCTGTAAGCTCTGTGAGCGCGCGTGTCCCGTCGACGCCATCTCAATCAACGTCTCCTATGAGC
GCTCCGGTGAGATGGAGTGA

Upstream 100 bases:

>100_bases
GATAACGTTCCCCGATGAATTCGACAGGGTACAACACCCGGGCCACTCTCGCAACCGTAAAAAGAGCTAGCCTGGGAAGC
TCCGCCGGGGGCTCGCGCTC

Downstream 100 bases:

>100_bases
GTTTTTTCACCCACCCCACCCGCTCCGCCCGGGGCGAACGTTGCGGGTAGGGACCTACCTGGTGGATGGCACCCCTCGTC
CCGCCGTGTTTCTCGACGAC

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MPIEIDMDSCLLCEACVAACPTGAIRREDGDMNHCIVCGACVKACPVDALELEDLEREVDGEKVELKRIAWKPEECHKED
PPQCGEVCPQEIMRIEDGYPELRGFCVMCLKCMETCPIDAIGMKGVVEPKSEPPEHPEDEDVYVHPERCVGCTYCLQVCP
TDAIEMVPTDAEFFKAEENEWSPVYVDPDTMELKQGRKVAKIDPEKCTGCTLCAQVCPWGAITAARDVPVQSREVKNEID
EDKCVGCGVCAEVCPGDLIEVDGVAKVPEKCPACKLCERACPVDAISINVSYERSGEME

Sequences:

>Translated_299_residues
MPIEIDMDSCLLCEACVAACPTGAIRREDGDMNHCIVCGACVKACPVDALELEDLEREVDGEKVELKRIAWKPEECHKED
PPQCGEVCPQEIMRIEDGYPELRGFCVMCLKCMETCPIDAIGMKGVVEPKSEPPEHPEDEDVYVHPERCVGCTYCLQVCP
TDAIEMVPTDAEFFKAEENEWSPVYVDPDTMELKQGRKVAKIDPEKCTGCTLCAQVCPWGAITAARDVPVQSREVKNEID
EDKCVGCGVCAEVCPGDLIEVDGVAKVPEKCPACKLCERACPVDAISINVSYERSGEME
>Mature_298_residues
PIEIDMDSCLLCEACVAACPTGAIRREDGDMNHCIVCGACVKACPVDALELEDLEREVDGEKVELKRIAWKPEECHKEDP
PQCGEVCPQEIMRIEDGYPELRGFCVMCLKCMETCPIDAIGMKGVVEPKSEPPEHPEDEDVYVHPERCVGCTYCLQVCPT
DAIEMVPTDAEFFKAEENEWSPVYVDPDTMELKQGRKVAKIDPEKCTGCTLCAQVCPWGAITAARDVPVQSREVKNEIDE
DKCVGCGVCAEVCPGDLIEVDGVAKVPEKCPACKLCERACPVDAISINVSYERSGEME

Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 10 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: 1.2.7.- [C]

Molecular weight: Translated: 32904; Mature: 32773

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
13.7 %Cys+Met (Translated Protein)
10.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
13.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIEIDMDSCLLCEACVAACPTGAIRREDGDMNHCIVCGACVKACPVDALELEDLEREVD
CCEEECCCHHHHHHHHHHHCCCCCEECCCCCCCEEEEHHHHHHHCCCCHHHHHHHHHHCC
GEKVELKRIAWKPEECHKEDPPQCGEVCPQEIMRIEDGYPELRGFCVMCLKCMETCPIDA
CCEEEHHHHCCCCHHHCCCCCCHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
IGMKGVVEPKSEPPEHPEDEDVYVHPERCVGCTYCLQVCPTDAIEMVPTDAEFFKAEENE
CCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCHHHHCCCCHHHHCCCCCC
WSPVYVDPDTMELKQGRKVAKIDPEKCTGCTLCAQVCPWGAITAARDVPVQSREVKNEID
CCCEEECCCHHHHHCCCEEECCCHHHCCHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHCC
EDKCVGCGVCAEVCPGDLIEVDGVAKVPEKCPACKLCERACPVDAISINVSYERSGEME
HHHCCCCCHHHHHCCCCEEECCCCHHCHHCCCHHHHHHHHCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure 
PIEIDMDSCLLCEACVAACPTGAIRREDGDMNHCIVCGACVKACPVDALELEDLEREVD
CEEECCCHHHHHHHHHHHCCCCCEECCCCCCCEEEEHHHHHHHCCCCHHHHHHHHHHCC
GEKVELKRIAWKPEECHKEDPPQCGEVCPQEIMRIEDGYPELRGFCVMCLKCMETCPIDA
CCEEEHHHHCCCCHHHCCCCCCHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
IGMKGVVEPKSEPPEHPEDEDVYVHPERCVGCTYCLQVCPTDAIEMVPTDAEFFKAEENE
CCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCHHHHCCCCHHHHCCCCCC
WSPVYVDPDTMELKQGRKVAKIDPEKCTGCTLCAQVCPWGAITAARDVPVQSREVKNEID
CCCEEECCCHHHHHCCCEEECCCHHHCCHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHCC
EDKCVGCGVCAEVCPGDLIEVDGVAKVPEKCPACKLCERACPVDAISINVSYERSGEME
HHHCCCCCHHHHHCCCCEEECCCCHHCHHCCCHHHHHHHHCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]