Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is yleA [C]

Identifier: 20094428

GI number: 20094428

Start: 951376

End: 952827

Strand: Direct

Name: yleA [C]

Synonym: MK0992

Alternate gene names: 20094428

Gene position: 951376-952827 (Clockwise)

Preceding gene: 20094426

Following gene: 20094430

Centisome position: 56.13

GC content: 58.13

Gene sequence:

>1452_bases
ATGATCGATGTCCTCCTGATCAACCCCCCTGATGTCACGACTAAGTACCAGCGATTCTTGGGCATTACAGCGCCTCCGCT
TGGACTAGCCTACATCGCCGCGGTGCTCGAGGAGGCGGGATACACGGTTAAAATCCTCGATTGTCCCCCACTGGACATGT
CCTTCGAGGACCTGAGACGAGCCGTGCGGAAGCTCCGTCCTAGAATCGTATCCATCATGGCCACGACTCCGATCATTCAC
CAAGCCTACCAGGCGGCCAAGGTCGTCAAGGAAGAACTAGAGGACGTCATCGTATGCCTTGGCGGTTATCATCCTACCTT
CATGGACGTCGAGTGCCTCAAGGAGTGCCCCTACGTCGACGTCGTGGTACGGCGTGAGGGCGAATTCACGCTCCTGGATC
TGGCGAAGGTGTTCATCGACGGCGTAAAGACACTCTCAGAGGTACTGGGGATCACGTACCGGGAGAAGGACGACATCGTC
AGAGCCCCTGATCGACCCCTCATTCGCGATCTCGACGCACTACCGTTCCCCGCGCGTCACCTGCTTCCCATGGACAAGTA
CACTTTCTTCGGGGCTAAAACCACCGCCACCACGATGGTGTCGAGCAGGGGTTGTCCCGTAGGATGTGACTTCTGCGCTT
CTTCAGCGATGCACGGCCACAAACTCCGGATGCACTCGGCCGAGCGTGTGGTTTCCGAGATGGCGCATGTCCACGAGAAC
TACGGATCGGACATCATAGCCTTCGTCGATGACACGTTCACGTACGATCGGCGGCGTGTCGAGGAGATCTGTCGGCTCAT
CGTGGAAAGCGGTCTAGACGTAACCTGGGGCTGTGCCGCACGCGTCGACACGATCGACAGGGAGTTACTTGAACTCATGC
GCGAGGCGGGATGCTCGGTCCTGTTCTTCGGAGTCGAGTCGGGTAGCCAGGAGGTCCTGGACAACGTCGGTAAGGGGTTT
ACGGTCGAGCAGACGAAGAAGGCGTTCCAACTCTGCCGCGAGTTCGACATAGTGACCGTGGCTTCGGCTGTGATCGGCTT
ACCGGGCGAGACCCACAGGAGTGCCCGGCAGACGATAAAGTTCCTGAAAGAAATCGACCCCGATTACGCCGTGGTGTCCG
TCGCGACGCCATATCCCGGCACTAAGTTCTACCAAGAGGCCGTGGAGAAAGGGCTCATCGAGGAAAAGTCGTGGGACAAG
TACACCCTCATGGACCCGGTGGTCAGGACGACCGAGCTGTCCCCAGAGGAGGTGAAGAAGTACCAAAAGCGCGCCATGAT
CGAGTTCTATCTTCGTCCCCGGTATCTTATCCGACGGCTGAAGGAGGACGGCATCGATGCCGTCCGTGTGACCGGAACGA
TGATCGCCGAGGTCGCGTTCAAGAAGATGAAAGCGTTGTTGGCTAAGATCCCGAGTCCTCGGTTTTCACACCGCAAGGGC
TCGGACGAGTGA

Upstream 100 bases:

>100_bases
TCACGCGTCCACTTTTGAGCTCGGGGGCACACTCCCTGGCTAACTCCATCCCGGTCCTGCGAGGCGAGGTCCGTACCCCC
CGGACGGAGGTGATTCCAAC

Downstream 100 bases:

>100_bases
CGAACGCCTCGTAACCTAAGGCGCTTAGCGTTTCGACGGCACGTTTCGCATCCTCCTCCCTCTCGAATAACGCGACCGCG
CATCCTCCTCCTCCGGCGCC

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MIDVLLINPPDVTTKYQRFLGITAPPLGLAYIAAVLEEAGYTVKILDCPPLDMSFEDLRRAVRKLRPRIVSIMATTPIIH
QAYQAAKVVKEELEDVIVCLGGYHPTFMDVECLKECPYVDVVVRREGEFTLLDLAKVFIDGVKTLSEVLGITYREKDDIV
RAPDRPLIRDLDALPFPARHLLPMDKYTFFGAKTTATTMVSSRGCPVGCDFCASSAMHGHKLRMHSAERVVSEMAHVHEN
YGSDIIAFVDDTFTYDRRRVEEICRLIVESGLDVTWGCAARVDTIDRELLELMREAGCSVLFFGVESGSQEVLDNVGKGF
TVEQTKKAFQLCREFDIVTVASAVIGLPGETHRSARQTIKFLKEIDPDYAVVSVATPYPGTKFYQEAVEKGLIEEKSWDK
YTLMDPVVRTTELSPEEVKKYQKRAMIEFYLRPRYLIRRLKEDGIDAVRVTGTMIAEVAFKKMKALLAKIPSPRFSHRKG
SDE

Sequences:

>Translated_483_residues
MIDVLLINPPDVTTKYQRFLGITAPPLGLAYIAAVLEEAGYTVKILDCPPLDMSFEDLRRAVRKLRPRIVSIMATTPIIH
QAYQAAKVVKEELEDVIVCLGGYHPTFMDVECLKECPYVDVVVRREGEFTLLDLAKVFIDGVKTLSEVLGITYREKDDIV
RAPDRPLIRDLDALPFPARHLLPMDKYTFFGAKTTATTMVSSRGCPVGCDFCASSAMHGHKLRMHSAERVVSEMAHVHEN
YGSDIIAFVDDTFTYDRRRVEEICRLIVESGLDVTWGCAARVDTIDRELLELMREAGCSVLFFGVESGSQEVLDNVGKGF
TVEQTKKAFQLCREFDIVTVASAVIGLPGETHRSARQTIKFLKEIDPDYAVVSVATPYPGTKFYQEAVEKGLIEEKSWDK
YTLMDPVVRTTELSPEEVKKYQKRAMIEFYLRPRYLIRRLKEDGIDAVRVTGTMIAEVAFKKMKALLAKIPSPRFSHRKG
SDE
>Mature_483_residues
MIDVLLINPPDVTTKYQRFLGITAPPLGLAYIAAVLEEAGYTVKILDCPPLDMSFEDLRRAVRKLRPRIVSIMATTPIIH
QAYQAAKVVKEELEDVIVCLGGYHPTFMDVECLKECPYVDVVVRREGEFTLLDLAKVFIDGVKTLSEVLGITYREKDDIV
RAPDRPLIRDLDALPFPARHLLPMDKYTFFGAKTTATTMVSSRGCPVGCDFCASSAMHGHKLRMHSAERVVSEMAHVHEN
YGSDIIAFVDDTFTYDRRRVEEICRLIVESGLDVTWGCAARVDTIDRELLELMREAGCSVLFFGVESGSQEVLDNVGKGF
TVEQTKKAFQLCREFDIVTVASAVIGLPGETHRSARQTIKFLKEIDPDYAVVSVATPYPGTKFYQEAVEKGLIEEKSWDK
YTLMDPVVRTTELSPEEVKKYQKRAMIEFYLRPRYLIRRLKEDGIDAVRVTGTMIAEVAFKKMKALLAKIPSPRFSHRKG
SDE

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 54452; Mature: 54452

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDVLLINPPDVTTKYQRFLGITAPPLGLAYIAAVLEEAGYTVKILDCPPLDMSFEDLRR
CEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHH
AVRKLRPRIVSIMATTPIIHQAYQAAKVVKEELEDVIVCLGGYHPTFMDVECLKECPYVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEE
VVVRREGEFTLLDLAKVFIDGVKTLSEVLGITYREKDDIVRAPDRPLIRDLDALPFPARH
EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHH
LLPMDKYTFFGAKTTATTMVSSRGCPVGCDFCASSAMHGHKLRMHSAERVVSEMAHVHEN
CCCCCHHEEECCCHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
YGSDIIAFVDDTFTYDRRRVEEICRLIVESGLDVTWGCAARVDTIDRELLELMREAGCSV
CCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCEE
LFFGVESGSQEVLDNVGKGFTVEQTKKAFQLCREFDIVTVASAVIGLPGETHRSARQTIK
EEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHH
FLKEIDPDYAVVSVATPYPGTKFYQEAVEKGLIEEKSWDKYTLMDPVVRTTELSPEEVKK
HHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCCHHHHHH
YQKRAMIEFYLRPRYLIRRLKEDGIDAVRVTGTMIAEVAFKKMKALLAKIPSPRFSHRKG
HHHHHHHHHHHCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SDE
CCC
>Mature Secondary Structure
MIDVLLINPPDVTTKYQRFLGITAPPLGLAYIAAVLEEAGYTVKILDCPPLDMSFEDLRR
CEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHH
AVRKLRPRIVSIMATTPIIHQAYQAAKVVKEELEDVIVCLGGYHPTFMDVECLKECPYVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEE
VVVRREGEFTLLDLAKVFIDGVKTLSEVLGITYREKDDIVRAPDRPLIRDLDALPFPARH
EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHH
LLPMDKYTFFGAKTTATTMVSSRGCPVGCDFCASSAMHGHKLRMHSAERVVSEMAHVHEN
CCCCCHHEEECCCHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
YGSDIIAFVDDTFTYDRRRVEEICRLIVESGLDVTWGCAARVDTIDRELLELMREAGCSV
CCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCEE
LFFGVESGSQEVLDNVGKGFTVEQTKKAFQLCREFDIVTVASAVIGLPGETHRSARQTIK
EEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHH
FLKEIDPDYAVVSVATPYPGTKFYQEAVEKGLIEEKSWDKYTLMDPVVRTTELSPEEVKK
HHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCCHHHHHH
YQKRAMIEFYLRPRYLIRRLKEDGIDAVRVTGTMIAEVAFKKMKALLAKIPSPRFSHRKG
HHHHHHHHHHHCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SDE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]