| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094424
Identifier: 20094424
GI number: 20094424
Start: 948365
End: 948892
Strand: Direct
Name: 20094424
Synonym: MK0988
Alternate gene names: NA
Gene position: 948365-948892 (Clockwise)
Preceding gene: 20094423
Following gene: 20094425
Centisome position: 55.95
GC content: 57.77
Gene sequence:
>528_bases ATGGCCGGTGCGGGGGTGAGTGCGTCGCGTGAAGACATCGCACTCCGGCTACGGCGTGTGAGCAGAGTCTGGGGAGCGGC ACTGTACGTAGGCTCCGTACTCCTCATCGTCCTGATCGCCGTGTTAGGACTCGGAGCCCTAGGCCAATACAGCTACCAGG CTCAAGTGCTGCTCTTCGGTAACTACAGGGGGCAGCTGGCGGAGATCGATGAGAAGTATCAAGTGCTCAAGACGGAGTTC GATCAAGCCAATCATAAGCTACAGGCACTGCGTGACCTGTACCCGATTTCGAGTGCCGACCTCCACCAAGTCGAGAAAAT CCGCGCTAAAGCTTCCCTAGAGCTCCAGTCGTTGAAACTGAAGAAGAAAGACACCGAATTCGCGGTCTACGTGCTGAAAG ATCCGGCAACCTCCGATCTGAAGCTGAAGGAATGTATGGCGGAGCTGCGACGCGCGGAAGCAGCGGTGAAGGCGTTCGTA CGGGCGGTCAAGGGGCTTGAAGACAAGTACGCCGGCAGGGTCCACTGA
Upstream 100 bases:
>100_bases TCGCCGATGTACTTTCGGACCTGGAGGAGGCCTCTCGATGCGAGATTCGGGCCTGGATCATCCGGGAGTACCCGACATGG GATAGAACCGTGGTAGAACG
Downstream 100 bases:
>100_bases AGTCGACCTGGGCTCCCTACATCCCGGTCTGAAAGTCGAGCGACACTCCGGCTACTTACGGTTCAGACTTTACGGACTGA TCGAGTTCGAGGTGGACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MAGAGVSASREDIALRLRRVSRVWGAALYVGSVLLIVLIAVLGLGALGQYSYQAQVLLFGNYRGQLAEIDEKYQVLKTEF DQANHKLQALRDLYPISSADLHQVEKIRAKASLELQSLKLKKKDTEFAVYVLKDPATSDLKLKECMAELRRAEAAVKAFV RAVKGLEDKYAGRVH
Sequences:
>Translated_175_residues MAGAGVSASREDIALRLRRVSRVWGAALYVGSVLLIVLIAVLGLGALGQYSYQAQVLLFGNYRGQLAEIDEKYQVLKTEF DQANHKLQALRDLYPISSADLHQVEKIRAKASLELQSLKLKKKDTEFAVYVLKDPATSDLKLKECMAELRRAEAAVKAFV RAVKGLEDKYAGRVH >Mature_174_residues AGAGVSASREDIALRLRRVSRVWGAALYVGSVLLIVLIAVLGLGALGQYSYQAQVLLFGNYRGQLAEIDEKYQVLKTEFD QANHKLQALRDLYPISSADLHQVEKIRAKASLELQSLKLKKKDTEFAVYVLKDPATSDLKLKECMAELRRAEAAVKAFVR AVKGLEDKYAGRVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19419; Mature: 19288
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGAGVSASREDIALRLRRVSRVWGAALYVGSVLLIVLIAVLGLGALGQYSYQAQVLLFG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE NYRGQLAEIDEKYQVLKTEFDQANHKLQALRDLYPISSADLHQVEKIRAKASLELQSLKL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH KKKDTEFAVYVLKDPATSDLKLKECMAELRRAEAAVKAFVRAVKGLEDKYAGRVH CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC >Mature Secondary Structure AGAGVSASREDIALRLRRVSRVWGAALYVGSVLLIVLIAVLGLGALGQYSYQAQVLLFG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE NYRGQLAEIDEKYQVLKTEFDQANHKLQALRDLYPISSADLHQVEKIRAKASLELQSLKL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH KKKDTEFAVYVLKDPATSDLKLKECMAELRRAEAAVKAFVRAVKGLEDKYAGRVH CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA