| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094423
Identifier: 20094423
GI number: 20094423
Start: 947313
End: 948383
Strand: Direct
Name: 20094423
Synonym: MK0987
Alternate gene names: NA
Gene position: 947313-948383 (Clockwise)
Preceding gene: 20094422
Following gene: 20094424
Centisome position: 55.89
GC content: 59.38
Gene sequence:
>1071_bases GTGGTCCGTGGTGCCTTCCCGAAGGGTTGTAGGCTCTGCGTGTGCGGCGCCAAGCTGGTGGTGTTCGTGACCGGGGTCTG TAACCGCGGGTGTTGGTACTGTCCCGTATCGCCGAGGAAAAAAGGGAGTGACGTTTCCTTCGCCAACGAGCGTCCGATAC GGTCCGAGCGGGACCTGGTGAAAGAAGCGGAATTAATGGACGCGGAAGGAGCGAGTCTCACCGGTGGCGATCCGTTAACG CGTCTCGAGAGGGCCGTCAACATCATCCGCACGCTCAAAGACGAGTTCGGCGACGACTTCCACATCCACCTCTATGCGCC GGCGGAGTCCGTCAGGGAAGGGGCGATTGAAGAGCTAGATGGAGTGGGACTGGACGAGTTGCGCGTGCACCCCTCCCCGG ACTCGACTGTCAACAGGCGTGCGGCCGAGGTCCTGGAGGATTCCGGAATGGATCTGGGGTTCGAGATGCCCGCCATTCCC GGGGAAGAAAACTGGATCCTGGAGGTAGCTAAACTGGCGGACGAGTACGGGTTCGACTTCCTCAACGTTAACGAGCTGGA ATTCACCGAATCTAACGCCGAAGAACTCAGAAGACGTAGGTTCGAGCGCGTAGATGACGACCTGTCCGACGCCGTCGCCG GGAGCGAGAGGACGGCCCTCACCGCGCTATCGGAGGTTGCTAACGACGTCGGCATCACCCTCCATTACTGTCCTTCCGAG GTGAAGGATGCCGTCCAGTTCCGGAAAAGGATCAAGAGAATGGCGAAGAACGTGGCACGTGACCACGAGGAGATAGATGA GGAAGGGCTCATAGTGAAGGGGATTTTCGAAGTAATATCCGGTGATCCGGAGGATCTCGCCGACGTGCTGATCAACATCC TCGAGGTGCCTGAGGAATGGGTGTATGTGGATGGGAGCCGAGTAGAGACGAAGCCGTTCGTCGTCGACGAGCTCGCCGAT GTACTTTCGGACCTGGAGGAGGCCTCTCGATGCGAGATTCGGGCCTGGATCATCCGGGAGTACCCGACATGGGATAGAAC CGTGGTAGAACGATGGCCGGTGCGGGGGTGA
Upstream 100 bases:
>100_bases GTCCACGTGCTGGCACCCTCATCGCGGCTGTGGGGGTGGATCGGATTTCGAGGCTGATCCGGGGCTGCCTCGAGGCTTCC GAAGACTAGACACCGGAAAT
Downstream 100 bases:
>100_bases GTGCGTCGCGTGAAGACATCGCACTCCGGCTACGGCGTGTGAGCAGAGTCTGGGGAGCGGCACTGTACGTAGGCTCCGTA CTCCTCATCGTCCTGATCGC
Product: Fe-S protein related to pyruvate formate-lyase activating enzyme
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MVRGAFPKGCRLCVCGAKLVVFVTGVCNRGCWYCPVSPRKKGSDVSFANERPIRSERDLVKEAELMDAEGASLTGGDPLT RLERAVNIIRTLKDEFGDDFHIHLYAPAESVREGAIEELDGVGLDELRVHPSPDSTVNRRAAEVLEDSGMDLGFEMPAIP GEENWILEVAKLADEYGFDFLNVNELEFTESNAEELRRRRFERVDDDLSDAVAGSERTALTALSEVANDVGITLHYCPSE VKDAVQFRKRIKRMAKNVARDHEEIDEEGLIVKGIFEVISGDPEDLADVLINILEVPEEWVYVDGSRVETKPFVVDELAD VLSDLEEASRCEIRAWIIREYPTWDRTVVERWPVRG
Sequences:
>Translated_356_residues MVRGAFPKGCRLCVCGAKLVVFVTGVCNRGCWYCPVSPRKKGSDVSFANERPIRSERDLVKEAELMDAEGASLTGGDPLT RLERAVNIIRTLKDEFGDDFHIHLYAPAESVREGAIEELDGVGLDELRVHPSPDSTVNRRAAEVLEDSGMDLGFEMPAIP GEENWILEVAKLADEYGFDFLNVNELEFTESNAEELRRRRFERVDDDLSDAVAGSERTALTALSEVANDVGITLHYCPSE VKDAVQFRKRIKRMAKNVARDHEEIDEEGLIVKGIFEVISGDPEDLADVLINILEVPEEWVYVDGSRVETKPFVVDELAD VLSDLEEASRCEIRAWIIREYPTWDRTVVERWPVRG >Mature_356_residues MVRGAFPKGCRLCVCGAKLVVFVTGVCNRGCWYCPVSPRKKGSDVSFANERPIRSERDLVKEAELMDAEGASLTGGDPLT RLERAVNIIRTLKDEFGDDFHIHLYAPAESVREGAIEELDGVGLDELRVHPSPDSTVNRRAAEVLEDSGMDLGFEMPAIP GEENWILEVAKLADEYGFDFLNVNELEFTESNAEELRRRRFERVDDDLSDAVAGSERTALTALSEVANDVGITLHYCPSE VKDAVQFRKRIKRMAKNVARDHEEIDEEGLIVKGIFEVISGDPEDLADVLINILEVPEEWVYVDGSRVETKPFVVDELAD VLSDLEEASRCEIRAWIIREYPTWDRTVVERWPVRG
Specific function: Unknown
COG id: COG2108
COG function: function code R; Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the organic radical-activating enzymes family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006638 - InterPro: IPR001989 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 40013; Mature: 40013
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRGAFPKGCRLCVCGAKLVVFVTGVCNRGCWYCPVSPRKKGSDVSFANERPIRSERDLV CCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHH KEAELMDAEGASLTGGDPLTRLERAVNIIRTLKDEFGDDFHIHLYAPAESVREGAIEELD HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHC GVGLDELRVHPSPDSTVNRRAAEVLEDSGMDLGFEMPAIPGEENWILEVAKLADEYGFDF CCCHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCE LNVNELEFTESNAEELRRRRFERVDDDLSDAVAGSERTALTALSEVANDVGITLHYCPSE ECCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHCEEEEECCHH VKDAVQFRKRIKRMAKNVARDHEEIDEEGLIVKGIFEVISGDPEDLADVLINILEVPEEW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH VYVDGSRVETKPFVVDELADVLSDLEEASRCEIRAWIIREYPTWDRTVVERWPVRG EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHCCCCC >Mature Secondary Structure MVRGAFPKGCRLCVCGAKLVVFVTGVCNRGCWYCPVSPRKKGSDVSFANERPIRSERDLV CCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHH KEAELMDAEGASLTGGDPLTRLERAVNIIRTLKDEFGDDFHIHLYAPAESVREGAIEELD HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHC GVGLDELRVHPSPDSTVNRRAAEVLEDSGMDLGFEMPAIPGEENWILEVAKLADEYGFDF CCCHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCE LNVNELEFTESNAEELRRRRFERVDDDLSDAVAGSERTALTALSEVANDVGITLHYCPSE ECCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHCEEEEECCHH VKDAVQFRKRIKRMAKNVARDHEEIDEEGLIVKGIFEVISGDPEDLADVLINILEVPEEW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH VYVDGSRVETKPFVVDELADVLSDLEEASRCEIRAWIIREYPTWDRTVVERWPVRG EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]