Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094423

Identifier: 20094423

GI number: 20094423

Start: 947313

End: 948383

Strand: Direct

Name: 20094423

Synonym: MK0987

Alternate gene names: NA

Gene position: 947313-948383 (Clockwise)

Preceding gene: 20094422

Following gene: 20094424

Centisome position: 55.89

GC content: 59.38

Gene sequence:

>1071_bases
GTGGTCCGTGGTGCCTTCCCGAAGGGTTGTAGGCTCTGCGTGTGCGGCGCCAAGCTGGTGGTGTTCGTGACCGGGGTCTG
TAACCGCGGGTGTTGGTACTGTCCCGTATCGCCGAGGAAAAAAGGGAGTGACGTTTCCTTCGCCAACGAGCGTCCGATAC
GGTCCGAGCGGGACCTGGTGAAAGAAGCGGAATTAATGGACGCGGAAGGAGCGAGTCTCACCGGTGGCGATCCGTTAACG
CGTCTCGAGAGGGCCGTCAACATCATCCGCACGCTCAAAGACGAGTTCGGCGACGACTTCCACATCCACCTCTATGCGCC
GGCGGAGTCCGTCAGGGAAGGGGCGATTGAAGAGCTAGATGGAGTGGGACTGGACGAGTTGCGCGTGCACCCCTCCCCGG
ACTCGACTGTCAACAGGCGTGCGGCCGAGGTCCTGGAGGATTCCGGAATGGATCTGGGGTTCGAGATGCCCGCCATTCCC
GGGGAAGAAAACTGGATCCTGGAGGTAGCTAAACTGGCGGACGAGTACGGGTTCGACTTCCTCAACGTTAACGAGCTGGA
ATTCACCGAATCTAACGCCGAAGAACTCAGAAGACGTAGGTTCGAGCGCGTAGATGACGACCTGTCCGACGCCGTCGCCG
GGAGCGAGAGGACGGCCCTCACCGCGCTATCGGAGGTTGCTAACGACGTCGGCATCACCCTCCATTACTGTCCTTCCGAG
GTGAAGGATGCCGTCCAGTTCCGGAAAAGGATCAAGAGAATGGCGAAGAACGTGGCACGTGACCACGAGGAGATAGATGA
GGAAGGGCTCATAGTGAAGGGGATTTTCGAAGTAATATCCGGTGATCCGGAGGATCTCGCCGACGTGCTGATCAACATCC
TCGAGGTGCCTGAGGAATGGGTGTATGTGGATGGGAGCCGAGTAGAGACGAAGCCGTTCGTCGTCGACGAGCTCGCCGAT
GTACTTTCGGACCTGGAGGAGGCCTCTCGATGCGAGATTCGGGCCTGGATCATCCGGGAGTACCCGACATGGGATAGAAC
CGTGGTAGAACGATGGCCGGTGCGGGGGTGA

Upstream 100 bases:

>100_bases
GTCCACGTGCTGGCACCCTCATCGCGGCTGTGGGGGTGGATCGGATTTCGAGGCTGATCCGGGGCTGCCTCGAGGCTTCC
GAAGACTAGACACCGGAAAT

Downstream 100 bases:

>100_bases
GTGCGTCGCGTGAAGACATCGCACTCCGGCTACGGCGTGTGAGCAGAGTCTGGGGAGCGGCACTGTACGTAGGCTCCGTA
CTCCTCATCGTCCTGATCGC

Product: Fe-S protein related to pyruvate formate-lyase activating enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MVRGAFPKGCRLCVCGAKLVVFVTGVCNRGCWYCPVSPRKKGSDVSFANERPIRSERDLVKEAELMDAEGASLTGGDPLT
RLERAVNIIRTLKDEFGDDFHIHLYAPAESVREGAIEELDGVGLDELRVHPSPDSTVNRRAAEVLEDSGMDLGFEMPAIP
GEENWILEVAKLADEYGFDFLNVNELEFTESNAEELRRRRFERVDDDLSDAVAGSERTALTALSEVANDVGITLHYCPSE
VKDAVQFRKRIKRMAKNVARDHEEIDEEGLIVKGIFEVISGDPEDLADVLINILEVPEEWVYVDGSRVETKPFVVDELAD
VLSDLEEASRCEIRAWIIREYPTWDRTVVERWPVRG

Sequences:

>Translated_356_residues
MVRGAFPKGCRLCVCGAKLVVFVTGVCNRGCWYCPVSPRKKGSDVSFANERPIRSERDLVKEAELMDAEGASLTGGDPLT
RLERAVNIIRTLKDEFGDDFHIHLYAPAESVREGAIEELDGVGLDELRVHPSPDSTVNRRAAEVLEDSGMDLGFEMPAIP
GEENWILEVAKLADEYGFDFLNVNELEFTESNAEELRRRRFERVDDDLSDAVAGSERTALTALSEVANDVGITLHYCPSE
VKDAVQFRKRIKRMAKNVARDHEEIDEEGLIVKGIFEVISGDPEDLADVLINILEVPEEWVYVDGSRVETKPFVVDELAD
VLSDLEEASRCEIRAWIIREYPTWDRTVVERWPVRG
>Mature_356_residues
MVRGAFPKGCRLCVCGAKLVVFVTGVCNRGCWYCPVSPRKKGSDVSFANERPIRSERDLVKEAELMDAEGASLTGGDPLT
RLERAVNIIRTLKDEFGDDFHIHLYAPAESVREGAIEELDGVGLDELRVHPSPDSTVNRRAAEVLEDSGMDLGFEMPAIP
GEENWILEVAKLADEYGFDFLNVNELEFTESNAEELRRRRFERVDDDLSDAVAGSERTALTALSEVANDVGITLHYCPSE
VKDAVQFRKRIKRMAKNVARDHEEIDEEGLIVKGIFEVISGDPEDLADVLINILEVPEEWVYVDGSRVETKPFVVDELAD
VLSDLEEASRCEIRAWIIREYPTWDRTVVERWPVRG

Specific function: Unknown

COG id: COG2108

COG function: function code R; Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the organic radical-activating enzymes family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR001989
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 40013; Mature: 40013

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRGAFPKGCRLCVCGAKLVVFVTGVCNRGCWYCPVSPRKKGSDVSFANERPIRSERDLV
CCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHH
KEAELMDAEGASLTGGDPLTRLERAVNIIRTLKDEFGDDFHIHLYAPAESVREGAIEELD
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHC
GVGLDELRVHPSPDSTVNRRAAEVLEDSGMDLGFEMPAIPGEENWILEVAKLADEYGFDF
CCCHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCE
LNVNELEFTESNAEELRRRRFERVDDDLSDAVAGSERTALTALSEVANDVGITLHYCPSE
ECCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHCEEEEECCHH
VKDAVQFRKRIKRMAKNVARDHEEIDEEGLIVKGIFEVISGDPEDLADVLINILEVPEEW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH
VYVDGSRVETKPFVVDELADVLSDLEEASRCEIRAWIIREYPTWDRTVVERWPVRG
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MVRGAFPKGCRLCVCGAKLVVFVTGVCNRGCWYCPVSPRKKGSDVSFANERPIRSERDLV
CCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHH
KEAELMDAEGASLTGGDPLTRLERAVNIIRTLKDEFGDDFHIHLYAPAESVREGAIEELD
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHC
GVGLDELRVHPSPDSTVNRRAAEVLEDSGMDLGFEMPAIPGEENWILEVAKLADEYGFDF
CCCHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCE
LNVNELEFTESNAEELRRRRFERVDDDLSDAVAGSERTALTALSEVANDVGITLHYCPSE
ECCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHCEEEEECCHH
VKDAVQFRKRIKRMAKNVARDHEEIDEEGLIVKGIFEVISGDPEDLADVLINILEVPEEW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH
VYVDGSRVETKPFVVDELADVLSDLEEASRCEIRAWIIREYPTWDRTVVERWPVRG
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]