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The map label for this gene is dtdA

Identifier: 20094375

GI number: 20094375

Start: 897491

End: 898330

Strand: Direct

Name: dtdA

Synonym: MK0939

Alternate gene names: 20094375

Gene position: 897491-898330 (Clockwise)

Preceding gene: 20094372

Following gene: 20094378

Centisome position: 52.95

GC content: 63.21

Gene sequence:

>840_bases
TTGAGACGCGTCGTGATACTATGGAACCCGGACGACCCAGCCTCTAAAAACATCGCGGAAAGCCTGACCGAGGACGCCGA
AAAGCTCGATACCGAGGATCTCCAACACTACACCGTCGAAACCTGGGAACGTGACGGTGTCCGCTTCCACCTGACCGCCG
CCCTCGGCGATCTCATCGAGGAGGACGAGGCACGGGAACTCGCCCGTAAGTTCGACGTCATCGTGTTCGCCTCACGCCAC
GAGAGCAGGACGAAGAAGCCCTCACTCACCGTGCACGTACCCGGCAACCCGACCCCCGAGGCCAAGTTCGGTGGTAAGCC
GCTGGAGGTCTGTACGGCCGATCCGGCGGGTATGAAGGCCGCCCTCCTCGAGCTCAAGCGTTTCCGGGACAAGCGTGGCC
TGGATTACGACGTCTGCTACGAGGTAACGCACCATGGACCCCGCGATCCGGGGGCTCCCTGCTTCTTCATCGAGATCGGT
TCCGACGAGGAGCGCTGGACGGACGAAGAGGCCGGAGAGGCGTGCGCCCGCGCGATACTCGCGGCCGTCGATCCACCCGA
CGTCAAAGCCGTGGTCGGCTACGGCGGTGGACACTACGCTCCCGCCCATACCGACGCGGCCCTCTCCAATCGGAAGCTCG
CTTACGGTCACATAGTGCCGGACTACGCCGTCGATCACGACTACCTACGCGATCAGTTCCGCGAGGTGGTCGACAAAACC
CCTAGAGCCCGCGAGATTATCGTCGACGACCGTAACCTCGATTCCGGGATCGTGGAGCGGCTCGAGGATCTCGTCCGCGA
TCGCGGTCTCCGTCTCCGTGACGTCGAGGAGGTGAAGTGA

Upstream 100 bases:

>100_bases
CGGCCTCGAGGGCGATCCTCACGAGGTACTCCGTGTTCCCTTCCCGCGGGCTCCCGGAGATGCCTAAAATCATCCTACGT
CGCACCCCCGGGGTTTCGAG

Downstream 100 bases:

>100_bases
GTGATCCGCCGCGGGCAGAACCTCGAGGGTCCGCCGGGCCGATACCGACGGATCGGTGCGGTCGTCCGAGTCGGTCCTTA
CGCCCTTTTCCTCACCGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MRRVVILWNPDDPASKNIAESLTEDAEKLDTEDLQHYTVETWERDGVRFHLTAALGDLIEEDEARELARKFDVIVFASRH
ESRTKKPSLTVHVPGNPTPEAKFGGKPLEVCTADPAGMKAALLELKRFRDKRGLDYDVCYEVTHHGPRDPGAPCFFIEIG
SDEERWTDEEAGEACARAILAAVDPPDVKAVVGYGGGHYAPAHTDAALSNRKLAYGHIVPDYAVDHDYLRDQFREVVDKT
PRAREIIVDDRNLDSGIVERLEDLVRDRGLRLRDVEEVK

Sequences:

>Translated_279_residues
MRRVVILWNPDDPASKNIAESLTEDAEKLDTEDLQHYTVETWERDGVRFHLTAALGDLIEEDEARELARKFDVIVFASRH
ESRTKKPSLTVHVPGNPTPEAKFGGKPLEVCTADPAGMKAALLELKRFRDKRGLDYDVCYEVTHHGPRDPGAPCFFIEIG
SDEERWTDEEAGEACARAILAAVDPPDVKAVVGYGGGHYAPAHTDAALSNRKLAYGHIVPDYAVDHDYLRDQFREVVDKT
PRAREIIVDDRNLDSGIVERLEDLVRDRGLRLRDVEEVK
>Mature_279_residues
MRRVVILWNPDDPASKNIAESLTEDAEKLDTEDLQHYTVETWERDGVRFHLTAALGDLIEEDEARELARKFDVIVFASRH
ESRTKKPSLTVHVPGNPTPEAKFGGKPLEVCTADPAGMKAALLELKRFRDKRGLDYDVCYEVTHHGPRDPGAPCFFIEIG
SDEERWTDEEAGEACARAILAAVDPPDVKAVVGYGGGHYAPAHTDAALSNRKLAYGHIVPDYAVDHDYLRDQFREVVDKT
PRAREIIVDDRNLDSGIVERLEDLVRDRGLRLRDVEEVK

Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)

COG id: COG1650

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dtdA deacylase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DTDA_METKA (P58851)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614222.1
- ProteinModelPortal:   P58851
- GeneID:   1477040
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK0939
- NMPDR:   fig|190192.1.peg.935
- HOGENOM:   HBG626914
- OMA:   HISKEAV
- ProtClustDB:   PRK03995
- BioCyc:   MKAN190192:MK0939-MONOMER
- HAMAP:   MF_00562
- InterPro:   IPR007508
- InterPro:   IPR018033
- PIRSF:   PIRSF016210

Pfam domain/function: PF04414 tRNA_deacylase

EC number: NA

Molecular weight: Translated: 31379; Mature: 31379

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVVILWNPDDPASKNIAESLTEDAEKLDTEDLQHYTVETWERDGVRFHLTAALGDLIE
CCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHC
EDEARELARKFDVIVFASRHESRTKKPSLTVHVPGNPTPEAKFGGKPLEVCTADPAGMKA
HHHHHHHHHHHCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCHHHH
ALLELKRFRDKRGLDYDVCYEVTHHGPRDPGAPCFFIEIGSDEERWTDEEAGEACARAIL
HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHCCCHHHHHHHHHHHH
AAVDPPDVKAVVGYGGGHYAPAHTDAALSNRKLAYGHIVPDYAVDHDYLRDQFREVVDKT
HHCCCCCCEEEEECCCCCCCCCCCCHHHCCCCEEECCCCCCHHCCHHHHHHHHHHHHHCC
PRAREIIVDDRNLDSGIVERLEDLVRDRGLRLRDVEEVK
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHCC
>Mature Secondary Structure
MRRVVILWNPDDPASKNIAESLTEDAEKLDTEDLQHYTVETWERDGVRFHLTAALGDLIE
CCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHC
EDEARELARKFDVIVFASRHESRTKKPSLTVHVPGNPTPEAKFGGKPLEVCTADPAGMKA
HHHHHHHHHHHCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCHHHH
ALLELKRFRDKRGLDYDVCYEVTHHGPRDPGAPCFFIEIGSDEERWTDEEAGEACARAIL
HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHCCCHHHHHHHHHHHH
AAVDPPDVKAVVGYGGGHYAPAHTDAALSNRKLAYGHIVPDYAVDHDYLRDQFREVVDKT
HHCCCCCCEEEEECCCCCCCCCCCCHHHCCCCEEECCCCCCHHCCHHHHHHHHHHHHHCC
PRAREIIVDDRNLDSGIVERLEDLVRDRGLRLRDVEEVK
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014