| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is yleA [C]
Identifier: 20094368
GI number: 20094368
Start: 890735
End: 892306
Strand: Direct
Name: yleA [C]
Synonym: MK0932
Alternate gene names: 20094368
Gene position: 890735-892306 (Clockwise)
Preceding gene: 20094364
Following gene: 20094372
Centisome position: 52.55
GC content: 60.24
Gene sequence:
>1572_bases TTGAGTCAAAGTGTCTTGATAGTAGACGCGCTGGGCGCAGGGAAGGGGTGGAGGACTAGATCCAGAGACGTTATCGGGGC GGGTCCTAGGACCGTCGCATCGCTACTGGAAAGTGATTATGAAGTATCGTTGATTACTTATGAAGATCTGCAGAAATTAG GACTAGATAGTGTTATGGATTACGATACCGTAGGTGTCAGTATAATGACCGGCGACGAGCGGGCCGCCCGGAGGATGTTC GACCACACACGTTCTCGGACGTTTCGGTTCATCGGTGGTCCCGGAGCCGCCGATCCGAACGCACTCCTCAAGACTGGAGC CGACGCGGCCGTGATCGGTGAAGCCGAGGAGACCCTACCTGAACTCTTGGAGGAGCGTGGACCCGTCCGCGGCGTGTACT TCCGGAGGGGAACCGAGGTGGACTTTCCGGGTCCTAGGCCCATTTCCAGGCGATTCACCCGGGTCAATCCGGAGTACATC CGTGCCTACGCACACCGATGGGCCGCACGCGTTTACGTCGAGATCGTCCGCGGGTGCAGCAACTCCTGCAGGACGACCTT CGAACTGCCCGACGGCCGCAAATGTTCGGGATGTGGGAACTGTCGGGAGGGTGAAGGTGGGGAGCGATGGGAATGTCCCG AAGGTATTCCACCGGGTTGCGGGTTCTGTTCGGTACCCTCGATCTTCGGGCCGACCAGGTCGAGACCGTTGAACGAAGTG GTGCGGGAAGTACGGGGGCTCGTCCGGGAGGGGATCCGTCGGGTAGTTCTCAGCGCCTCCGACGTACTGGATTACGGTCG GGGCGACTTACTGACTGATCCTCGGACTCCGCCCCCGAACGTCGAGGCCTTAAGGCGCCTCCTGCGACGAACATCGAAGC ATGTGGACGTGCTCTTCGTCGAGAACGTGAAAGCGTGCTTATTGAACCGTGAGATCGCGGAGCTCCTCGGTGAGTACTGC CGCGGTACCTCGGTGAGCGTAGGTGTGGAGACGGGAGACCCGAGGCTGCTCCGCGCGATCGGGAAACCCTCCACGTTGAA GGAGGCGTTGCGTGCGATCCGTCTCCTGCGGAGGGCCGGTTTACGGCCTCATGCCTACTTCGTGTACGGACTACCCGGGC AGACGATGAAGTCCGCGAAACTCACGGCTAAAGCCATGAAACGAGCCGTCGAGATGGGAGCCGAGAAGATCACCGTGTAC AGGTTCCGACCGATTCCCGCCTCGGCCTTCGGAGATTTCCCTCCGGGTCCCAGTCCACGTAACGACGAGGCGAGCCGGCT CATTGCGGACACGGCGCGTCGTTTGAACGAGGCGCTGAAACGTAGGATGATCGGCAAGAGAATCCGCGTATACGTCGCCG AGCCCGACCTACGCCGGCCTCGGGACGCGATAGGTTGGCCGGTGAAAGGTGGTCCGAAGGTTCGGCTTAAGGGAGCTCGG GAGTTAGTCGGCACGGAATGTGAGGTAGAAATCACGGGAGTAGTGTCGGACAAGGTGGTCTCGGGTAAAGTAGTGAGGAT ACTGGAAGAGATCGACGTGGAGGCGTTAGAGGGACGAGGGGTTCCTGGCTGA
Upstream 100 bases:
>100_bases CGGAAGAAGAACATAAAACTCGGGTGTGTTCAGTGATCGAGTAGAGGCACATTTAACGGTTGAATACCCTGTCCGTCCGA CGACGAGAGGGTTACGCGGA
Downstream 100 bases:
>100_bases AGTCGGGTAGTACGGGACGTAGGTGTACCACCGCGCGAGCCACCACAGATGGCAAGGTCCGCGTCCGGGTCTGCCCGGGC CACCGCGCCATCTGCCCCGT
Product: Fe-S oxidoreductase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MSQSVLIVDALGAGKGWRTRSRDVIGAGPRTVASLLESDYEVSLITYEDLQKLGLDSVMDYDTVGVSIMTGDERAARRMF DHTRSRTFRFIGGPGAADPNALLKTGADAAVIGEAEETLPELLEERGPVRGVYFRRGTEVDFPGPRPISRRFTRVNPEYI RAYAHRWAARVYVEIVRGCSNSCRTTFELPDGRKCSGCGNCREGEGGERWECPEGIPPGCGFCSVPSIFGPTRSRPLNEV VREVRGLVREGIRRVVLSASDVLDYGRGDLLTDPRTPPPNVEALRRLLRRTSKHVDVLFVENVKACLLNREIAELLGEYC RGTSVSVGVETGDPRLLRAIGKPSTLKEALRAIRLLRRAGLRPHAYFVYGLPGQTMKSAKLTAKAMKRAVEMGAEKITVY RFRPIPASAFGDFPPGPSPRNDEASRLIADTARRLNEALKRRMIGKRIRVYVAEPDLRRPRDAIGWPVKGGPKVRLKGAR ELVGTECEVEITGVVSDKVVSGKVVRILEEIDVEALEGRGVPG
Sequences:
>Translated_523_residues MSQSVLIVDALGAGKGWRTRSRDVIGAGPRTVASLLESDYEVSLITYEDLQKLGLDSVMDYDTVGVSIMTGDERAARRMF DHTRSRTFRFIGGPGAADPNALLKTGADAAVIGEAEETLPELLEERGPVRGVYFRRGTEVDFPGPRPISRRFTRVNPEYI RAYAHRWAARVYVEIVRGCSNSCRTTFELPDGRKCSGCGNCREGEGGERWECPEGIPPGCGFCSVPSIFGPTRSRPLNEV VREVRGLVREGIRRVVLSASDVLDYGRGDLLTDPRTPPPNVEALRRLLRRTSKHVDVLFVENVKACLLNREIAELLGEYC RGTSVSVGVETGDPRLLRAIGKPSTLKEALRAIRLLRRAGLRPHAYFVYGLPGQTMKSAKLTAKAMKRAVEMGAEKITVY RFRPIPASAFGDFPPGPSPRNDEASRLIADTARRLNEALKRRMIGKRIRVYVAEPDLRRPRDAIGWPVKGGPKVRLKGAR ELVGTECEVEITGVVSDKVVSGKVVRILEEIDVEALEGRGVPG >Mature_522_residues SQSVLIVDALGAGKGWRTRSRDVIGAGPRTVASLLESDYEVSLITYEDLQKLGLDSVMDYDTVGVSIMTGDERAARRMFD HTRSRTFRFIGGPGAADPNALLKTGADAAVIGEAEETLPELLEERGPVRGVYFRRGTEVDFPGPRPISRRFTRVNPEYIR AYAHRWAARVYVEIVRGCSNSCRTTFELPDGRKCSGCGNCREGEGGERWECPEGIPPGCGFCSVPSIFGPTRSRPLNEVV REVRGLVREGIRRVVLSASDVLDYGRGDLLTDPRTPPPNVEALRRLLRRTSKHVDVLFVENVKACLLNREIAELLGEYCR GTSVSVGVETGDPRLLRAIGKPSTLKEALRAIRLLRRAGLRPHAYFVYGLPGQTMKSAKLTAKAMKRAVEMGAEKITVYR FRPIPASAFGDFPPGPSPRNDEASRLIADTARRLNEALKRRMIGKRIRVYVAEPDLRRPRDAIGWPVKGGPKVRLKGARE LVGTECEVEITGVVSDKVVSGKVVRILEEIDVEALEGRGVPG
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y932_METKA (Q8TWU9)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614215.1 - ProteinModelPortal: Q8TWU9 - GeneID: 1477033 - GenomeReviews: AE009439_GR - KEGG: mka:MK0932 - NMPDR: fig|190192.1.peg.928 - HOGENOM: HBG460714 - OMA: GFCSVPS - ProtClustDB: CLSK696928 - BioCyc: MKAN190192:MK0932-MONOMER - InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 - PANTHER: PTHR11918 - SMART: SM00729
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM
EC number: NA
Molecular weight: Translated: 57617; Mature: 57486
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSVLIVDALGAGKGWRTRSRDVIGAGPRTVASLLESDYEVSLITYEDLQKLGLDSVMD CCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHCCHHHHHC YDTVGVSIMTGDERAARRMFDHTRSRTFRFIGGPGAADPNALLKTGADAAVIGEAEETLP CCCCCEEEEECCHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHCCCCCEEECCHHHHHH ELLEERGPVRGVYFRRGTEVDFPGPRPISRRFTRVNPEYIRAYAHRWAARVYVEIVRGCS HHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC NSCRTTFELPDGRKCSGCGNCREGEGGERWECPEGIPPGCGFCSVPSIFGPTRSRPLNEV CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH VREVRGLVREGIRRVVLSASDVLDYGRGDLLTDPRTPPPNVEALRRLLRRTSKHVDVLFV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEE ENVKACLLNREIAELLGEYCRGTSVSVGVETGDPRLLRAIGKPSTLKEALRAIRLLRRAG CCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHCC LRPHAYFVYGLPGQTMKSAKLTAKAMKRAVEMGAEKITVYRFRPIPASAFGDFPPGPSPR CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCCCCCCCCCC NDEASRLIADTARRLNEALKRRMIGKRIRVYVAEPDLRRPRDAIGWPVKGGPKVRLKGAR CHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHCCCCCCCCCEEEECCHH ELVGTECEVEITGVVSDKVVSGKVVRILEEIDVEALEGRGVPG HHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCHHHHCCCCCCC >Mature Secondary Structure SQSVLIVDALGAGKGWRTRSRDVIGAGPRTVASLLESDYEVSLITYEDLQKLGLDSVMD CCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHCCHHHHHC YDTVGVSIMTGDERAARRMFDHTRSRTFRFIGGPGAADPNALLKTGADAAVIGEAEETLP CCCCCEEEEECCHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHCCCCCEEECCHHHHHH ELLEERGPVRGVYFRRGTEVDFPGPRPISRRFTRVNPEYIRAYAHRWAARVYVEIVRGCS HHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC NSCRTTFELPDGRKCSGCGNCREGEGGERWECPEGIPPGCGFCSVPSIFGPTRSRPLNEV CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH VREVRGLVREGIRRVVLSASDVLDYGRGDLLTDPRTPPPNVEALRRLLRRTSKHVDVLFV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEE ENVKACLLNREIAELLGEYCRGTSVSVGVETGDPRLLRAIGKPSTLKEALRAIRLLRRAG CCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHCC LRPHAYFVYGLPGQTMKSAKLTAKAMKRAVEMGAEKITVYRFRPIPASAFGDFPPGPSPR CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCCCCCCCCCC NDEASRLIADTARRLNEALKRRMIGKRIRVYVAEPDLRRPRDAIGWPVKGGPKVRLKGAR CHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHCCCCCCCCCEEEECCHH ELVGTECEVEITGVVSDKVVSGKVVRILEEIDVEALEGRGVPG HHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014