| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is PflX
Identifier: 20094364
GI number: 20094364
Start: 886477
End: 887508
Strand: Direct
Name: PflX
Synonym: MK0928
Alternate gene names: NA
Gene position: 886477-887508 (Clockwise)
Preceding gene: 20094363
Following gene: 20094368
Centisome position: 52.3
GC content: 59.4
Gene sequence:
>1032_bases GTGAGGCCGGTGCTGGAGCCGCTCGCGGAATATCACTCGATCGATGACGATGAACTCGCGGCCCGGTTCATGGTAGCACG GACCCTCCCGGTCGAAACCACGGAGGGGGAGTTAGAGGACCTGTGGAAGGAGCACGAGGAAGCTATGGAGGAATTTCGCG CGAGGTGGGAGGAGCGTCCCGCACCCGGAGATATCGAGGAGACCTCGCCGAACCTCCTAGACTTGAAGCTGGAGATCGCT CGGAAGATCCTCCGTGAATGCACGTTCTGCGAGCGGAGGTGTCGGGTCGATCGAACCCGTGAGGACGGGTTCTGTCGGGT TCCGATCAAACCCAGGATTTCCTCGGAGTTCCTGCATATGGGCGAAGAACGCGTGCTCGTGCCTTCTCACACAGTGTTCT TCTGCGGGTGTACGTTCCGATGTGTCTATTGTCAGAACTGGGACATAGCCTTCCGACCGACCAACGGGGTATACGTTAAA CCGGAGTCACTCGCCCGGGTGATCCGGCATCGACGATCTCAAGGTGCCAAGAACGTGAACTGGGTCGGAGGAGACCCCAC ACCGAACATTCACTACATCCTGGAGGTGCTCAGGCGGCTCGACGTGAACGTCCCGCAGGTTTGGAACTCCAACATGTACT TGACCGAGGAGGCCATGAGGCTGTTAGACGGCGTTATCGACCTGTACCTGACGGATTTCAAGTACGGCAACGACGAGTGC GCGGAGAGGTACTCGAACGCCCCGAATTACTGGGAGATAGTGACCCGGAACCACCGTGAAGCGGATCGGCAGTGTGGCCT GATCGTGCGTCACCTCGTTTTACCCGGTAACGTGGAGTGCTGTACGTTTCCGATCCTGGAGTGGATCGCCGAAGAGCTGG GTACGGACACGCCGTTGAACGTGATGCCCCAGTATCGCCCGGAGCACCGCGCGTACGAGTACCCGGAGATAAACAGGCGA CCGTCCGCGGACGAACTGGAAGAGGCGTGGGAGAAGGCGAGGGAGCTGGGGTTCCGATACTACCGGCTTTAG
Upstream 100 bases:
>100_bases GCTGTACAACAGCGGGACCTTGAACCGCTACGCCGTAGATCCTTACCTCCGCAAGAAGCCGATGCCGATGGGACCGCGGG GCGTGTACGACTGAGAGGGG
Downstream 100 bases:
>100_bases AGGGATTCGTGAACTTTACCCGGTTCCGGTAGGCCGAGCTCCTTCCGCTCCTCGATCTCCTTCTGGTTCTTGTTCTTCTT CACCTGGGCGAGCTTTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MRPVLEPLAEYHSIDDDELAARFMVARTLPVETTEGELEDLWKEHEEAMEEFRARWEERPAPGDIEETSPNLLDLKLEIA RKILRECTFCERRCRVDRTREDGFCRVPIKPRISSEFLHMGEERVLVPSHTVFFCGCTFRCVYCQNWDIAFRPTNGVYVK PESLARVIRHRRSQGAKNVNWVGGDPTPNIHYILEVLRRLDVNVPQVWNSNMYLTEEAMRLLDGVIDLYLTDFKYGNDEC AERYSNAPNYWEIVTRNHREADRQCGLIVRHLVLPGNVECCTFPILEWIAEELGTDTPLNVMPQYRPEHRAYEYPEINRR PSADELEEAWEKARELGFRYYRL
Sequences:
>Translated_343_residues MRPVLEPLAEYHSIDDDELAARFMVARTLPVETTEGELEDLWKEHEEAMEEFRARWEERPAPGDIEETSPNLLDLKLEIA RKILRECTFCERRCRVDRTREDGFCRVPIKPRISSEFLHMGEERVLVPSHTVFFCGCTFRCVYCQNWDIAFRPTNGVYVK PESLARVIRHRRSQGAKNVNWVGGDPTPNIHYILEVLRRLDVNVPQVWNSNMYLTEEAMRLLDGVIDLYLTDFKYGNDEC AERYSNAPNYWEIVTRNHREADRQCGLIVRHLVLPGNVECCTFPILEWIAEELGTDTPLNVMPQYRPEHRAYEYPEINRR PSADELEEAWEKARELGFRYYRL >Mature_343_residues MRPVLEPLAEYHSIDDDELAARFMVARTLPVETTEGELEDLWKEHEEAMEEFRARWEERPAPGDIEETSPNLLDLKLEIA RKILRECTFCERRCRVDRTREDGFCRVPIKPRISSEFLHMGEERVLVPSHTVFFCGCTFRCVYCQNWDIAFRPTNGVYVK PESLARVIRHRRSQGAKNVNWVGGDPTPNIHYILEVLRRLDVNVPQVWNSNMYLTEEAMRLLDGVIDLYLTDFKYGNDEC AERYSNAPNYWEIVTRNHREADRQCGLIVRHLVLPGNVECCTFPILEWIAEELGTDTPLNVMPQYRPEHRAYEYPEINRR PSADELEEAWEKARELGFRYYRL
Specific function: Unknown
COG id: COG1313
COG function: function code R; Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016431 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 40443; Mature: 40443
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPVLEPLAEYHSIDDDELAARFMVARTLPVETTEGELEDLWKEHEEAMEEFRARWEERP CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC APGDIEETSPNLLDLKLEIARKILRECTFCERRCRVDRTREDGFCRVPIKPRISSEFLHM CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHC GEERVLVPSHTVFFCGCTFRCVYCQNWDIAFRPTNGVYVKPESLARVIRHRRSQGAKNVN CCCEEECCCCEEEEECCEEEEEEECCCCEEEECCCCEEECHHHHHHHHHHHHHCCCCCCC WVGGDPTPNIHYILEVLRRLDVNVPQVWNSNMYLTEEAMRLLDGVIDLYLTDFKYGNDEC CCCCCCCCCHHHHHHHHHHHCCCCCHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHH AERYSNAPNYWEIVTRNHREADRQCGLIVRHLVLPGNVECCTFPILEWIAEELGTDTPLN HHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC VMPQYRPEHRAYEYPEINRRPSADELEEAWEKARELGFRYYRL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCC >Mature Secondary Structure MRPVLEPLAEYHSIDDDELAARFMVARTLPVETTEGELEDLWKEHEEAMEEFRARWEERP CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC APGDIEETSPNLLDLKLEIARKILRECTFCERRCRVDRTREDGFCRVPIKPRISSEFLHM CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHC GEERVLVPSHTVFFCGCTFRCVYCQNWDIAFRPTNGVYVKPESLARVIRHRRSQGAKNVN CCCEEECCCCEEEEECCEEEEEEECCCCEEEECCCCEEECHHHHHHHHHHHHHCCCCCCC WVGGDPTPNIHYILEVLRRLDVNVPQVWNSNMYLTEEAMRLLDGVIDLYLTDFKYGNDEC CCCCCCCCCHHHHHHHHHHHCCCCCHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHH AERYSNAPNYWEIVTRNHREADRQCGLIVRHLVLPGNVECCTFPILEWIAEELGTDTPLN HHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC VMPQYRPEHRAYEYPEINRRPSADELEEAWEKARELGFRYYRL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]