| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is MurE_1
Identifier: 20094362
GI number: 20094362
Start: 884275
End: 885705
Strand: Direct
Name: MurE_1
Synonym: MK0926
Alternate gene names: NA
Gene position: 884275-885705 (Clockwise)
Preceding gene: 20094360
Following gene: 20094363
Centisome position: 52.17
GC content: 61.77
Gene sequence:
>1431_bases GTGTCCTTGAGGTCGAAACTGGCCGACTTGGCCGGACTCCTCGCGCTCAAGGCGGTTCGGTTCGGGCCCGGTATGGGGCG GAGCTTTCCCGGATGGACCGTGATCAAGGTCGGCGGCTTCGACGCCGTTCGCGAGCTCGCACGGCGGCCGGAGTACGGAG TGGTGCTGATTACAGGTACCAACGGTAAGACCACGACCACCAGACTCGCCTGTGCGCTCCTAGCCGAAGATGCGGAGGTT TCGTGCAACTACGATAGTAACACAATCAACGCCGTCACGACGGGCCTACTCAAGGGTAGGAAGGCCGAGCTCGTGGTGAC GGAGTACGGGATTCGCAGCCGTGAGTACGGGATTCCAGATACCGTCTGCGAGCTCGTGGACCCGCTGGCGATCGCGTACA CAACTATCTCGAAGGAACACTTCCGGGAGAACGCGGACAAGAAGGACCCGTTCGGGGCGTACTTCGAGGCGAAGCGTCTC CTGGCGAGGCCCCTGAAGGACGGTGTGCTGGTGCTCAACGCGGATGATCCTCGGGTCACCTACATCCGCGACGAGAAGCG CGGTGACCCCGTGGAGTACGTTTTCTACGGTTTGGAGGTTGAAATCGAGGATCTGACGCCACCGACCGAAGAGCTCGAGT GTCCCGCGTGCGGCGGCGAGTTGGACTACGAGACCCGCTACTTTAACCATAAGGGACTGTACTCGTGTCGAGACTGCGAG TTCTCACGGCCTGACCCGGACGTCGCCGTGGTAAGGCTAAAGGGCGGCCCGGACGAGTGGGAGGTCACGCTGTCGTACGA TGTGACCAACGCCGTGATCGGAGAACGACTGGAGGGAAAGGTCACCTATGAGCTACCGCTGCCCGGTCTCCATAACGTCT ACAACAGCGTTTGCGCGATCTCCCTGTACCTCGCGGTTACCCCCCGGCCCGAGGACCCGGAGGGAACGATCCGACGGGTG ATCGAAGGGTTGAACCCGCTCGAGTTCATTCCGTCGGGCAGGTTCGAGGTGCTGAACGTGGGTGGTAAGCCCGTCGGCGT CGGTCAGGGAGACAACGGGGACGCCTTCAAGGCCAACGCGAACCTGATGCTTTCGGTGGCGGGGGATGTAGGGGCCTGTG TGTATACCACCCCGGACGAGGGTGAACATCCGATCTTCGAGATGCACAGGATTATCCTCCGAGCTCTCGAACCAGACGAG CTATACGTGTTTCCTGGTAGGGAGTCCGTGAAGGCCGCGGAAGAGTACTACGAGGAACTGACCGAGGAGTTCGACGCAGA GTTCTACCCTATCCCGCACGAGCGGATGCAGGAGAAAGTCGAGGAGATGCGTAGGGTGTGTGAGGAGGCGGATGGTCCCG TGTTCGCCTCCGGGTGCGGGCCGGAGCGCGAGATGTGGGAAGCCCTGAAGAGGGAGCTCAGGGGCGGCTGA
Upstream 100 bases:
>100_bases GTCAGTGCGGGGGTCCACCTCACGTTAACACCCCCTCACTCCGCAGCCGGGATCGTTAATCAAACTACGGGAAACACGTT ACACCGGTAGGGGACGTGTC
Downstream 100 bases:
>100_bases ATGGGGCTGAGGCGCCTCCTGGGGCTAGTCGGGGTCGGGTTGATCGTTCTGTACTTCACTCTACTTTCCGCAGAGTATTC GGAGTTTCAACGCTTCCTCG
Product: UDP-N-acetylmuramyl tripeptide synthase
Products: NA
Alternate protein names: Peptide Ligase; UDP-N-Acetylmuramyl Tripeptide Synthetase; Conserved Domain Protein; Mur Ligase Family Protein
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MSLRSKLADLAGLLALKAVRFGPGMGRSFPGWTVIKVGGFDAVRELARRPEYGVVLITGTNGKTTTTRLACALLAEDAEV SCNYDSNTINAVTTGLLKGRKAELVVTEYGIRSREYGIPDTVCELVDPLAIAYTTISKEHFRENADKKDPFGAYFEAKRL LARPLKDGVLVLNADDPRVTYIRDEKRGDPVEYVFYGLEVEIEDLTPPTEELECPACGGELDYETRYFNHKGLYSCRDCE FSRPDPDVAVVRLKGGPDEWEVTLSYDVTNAVIGERLEGKVTYELPLPGLHNVYNSVCAISLYLAVTPRPEDPEGTIRRV IEGLNPLEFIPSGRFEVLNVGGKPVGVGQGDNGDAFKANANLMLSVAGDVGACVYTTPDEGEHPIFEMHRIILRALEPDE LYVFPGRESVKAAEEYYEELTEEFDAEFYPIPHERMQEKVEEMRRVCEEADGPVFASGCGPEREMWEALKRELRGG
Sequences:
>Translated_476_residues MSLRSKLADLAGLLALKAVRFGPGMGRSFPGWTVIKVGGFDAVRELARRPEYGVVLITGTNGKTTTTRLACALLAEDAEV SCNYDSNTINAVTTGLLKGRKAELVVTEYGIRSREYGIPDTVCELVDPLAIAYTTISKEHFRENADKKDPFGAYFEAKRL LARPLKDGVLVLNADDPRVTYIRDEKRGDPVEYVFYGLEVEIEDLTPPTEELECPACGGELDYETRYFNHKGLYSCRDCE FSRPDPDVAVVRLKGGPDEWEVTLSYDVTNAVIGERLEGKVTYELPLPGLHNVYNSVCAISLYLAVTPRPEDPEGTIRRV IEGLNPLEFIPSGRFEVLNVGGKPVGVGQGDNGDAFKANANLMLSVAGDVGACVYTTPDEGEHPIFEMHRIILRALEPDE LYVFPGRESVKAAEEYYEELTEEFDAEFYPIPHERMQEKVEEMRRVCEEADGPVFASGCGPEREMWEALKRELRGG >Mature_475_residues SLRSKLADLAGLLALKAVRFGPGMGRSFPGWTVIKVGGFDAVRELARRPEYGVVLITGTNGKTTTTRLACALLAEDAEVS CNYDSNTINAVTTGLLKGRKAELVVTEYGIRSREYGIPDTVCELVDPLAIAYTTISKEHFRENADKKDPFGAYFEAKRLL ARPLKDGVLVLNADDPRVTYIRDEKRGDPVEYVFYGLEVEIEDLTPPTEELECPACGGELDYETRYFNHKGLYSCRDCEF SRPDPDVAVVRLKGGPDEWEVTLSYDVTNAVIGERLEGKVTYELPLPGLHNVYNSVCAISLYLAVTPRPEDPEGTIRRVI EGLNPLEFIPSGRFEVLNVGGKPVGVGQGDNGDAFKANANLMLSVAGDVGACVYTTPDEGEHPIFEMHRIILRALEPDEL YVFPGRESVKAAEEYYEELTEEFDAEFYPIPHERMQEKVEEMRRVCEEADGPVFASGCGPEREMWEALKRELRGG
Specific function: Unknown
COG id: COG0769
COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52842; Mature: 52711
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRSKLADLAGLLALKAVRFGPGMGRSFPGWTVIKVGGFDAVRELARRPEYGVVLITGT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCEEEEECC NGKTTTTRLACALLAEDAEVSCNYDSNTINAVTTGLLKGRKAELVVTEYGIRSREYGIPD CCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCH TVCELVDPLAIAYTTISKEHFRENADKKDPFGAYFEAKRLLARPLKDGVLVLNADDPRVT HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEE YIRDEKRGDPVEYVFYGLEVEIEDLTPPTEELECPACGGELDYETRYFNHKGLYSCRDCE EEECCCCCCCEEEEEEEEEEEECCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCEECCCC FSRPDPDVAVVRLKGGPDEWEVTLSYDVTNAVIGERLEGKVTYELPLPGLHNVYNSVCAI CCCCCCCEEEEEECCCCCCEEEEEEECCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHEE SLYLAVTPRPEDPEGTIRRVIEGLNPLEFIPSGRFEVLNVGGKPVGVGQGDNGDAFKANA EEEEEECCCCCCCCHHHHHHHHCCCCHHCCCCCCEEEEECCCCEEECCCCCCCCEEEECC NLMLSVAGDVGACVYTTPDEGEHPIFEMHRIILRALEPDELYVFPGRESVKAAEEYYEEL CEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHH TEEFDAEFYPIPHERMQEKVEEMRRVCEEADGPVFASGCGPEREMWEALKRELRGG HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SLRSKLADLAGLLALKAVRFGPGMGRSFPGWTVIKVGGFDAVRELARRPEYGVVLITGT CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCEEEEECC NGKTTTTRLACALLAEDAEVSCNYDSNTINAVTTGLLKGRKAELVVTEYGIRSREYGIPD CCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCH TVCELVDPLAIAYTTISKEHFRENADKKDPFGAYFEAKRLLARPLKDGVLVLNADDPRVT HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEE YIRDEKRGDPVEYVFYGLEVEIEDLTPPTEELECPACGGELDYETRYFNHKGLYSCRDCE EEECCCCCCCEEEEEEEEEEEECCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCEECCCC FSRPDPDVAVVRLKGGPDEWEVTLSYDVTNAVIGERLEGKVTYELPLPGLHNVYNSVCAI CCCCCCCEEEEEECCCCCCEEEEEEECCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHEE SLYLAVTPRPEDPEGTIRRVIEGLNPLEFIPSGRFEVLNVGGKPVGVGQGDNGDAFKANA EEEEEECCCCCCCCHHHHHHHHCCCCHHCCCCCCEEEEECCCCEEECCCCCCCCEEEECC NLMLSVAGDVGACVYTTPDEGEHPIFEMHRIILRALEPDELYVFPGRESVKAAEEYYEEL CEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHH TEEFDAEFYPIPHERMQEKVEEMRRVCEEADGPVFASGCGPEREMWEALKRELRGG HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA