Click here to switch to the map view.

The map label for this gene is 20094321

Identifier: 20094321

GI number: 20094321

Start: 834663

End: 834959

Strand: Direct

Name: 20094321

Synonym: MK0885

Alternate gene names: NA

Gene position: 834663-834959 (Clockwise)

Preceding gene: 20094320

Following gene: 20094327

Centisome position: 49.24

GC content: 53.2

Gene sequence:

>297_bases
ATGCGTTGGGAGACTAGGCGCGAAAAGATCGTGTCCTTGCTCACGGAGAGCCGTGAACCTCTGACCATTGAGGAGATAGC
TTACATGGTCGGAGAGGACGATAAATCGAAGATTATCGAGGACTTGGAACACATAGCTAAAACGCTACGTCGTGAGGGCA
AGACGCTGCTTATGGAACCGGCTAGGTGTAACAAGTGCGGGTACGTGTTCAAGAGCCTCAGGGTTAAGCCACCGTCCAGG
TGCCCGAAATGCAAGTCCGAGTGGATCCAACCGCCGAGGTTCACGATCAGGGAATGA

Upstream 100 bases:

>100_bases
GATAAAGACGCCAAGATACTGGGAGGAGATGTCTTGATAGTTCGTGGTCGGGACGAAGGATACAGGAAACTGAAGAAGAT
GGCTAGTGGGCGAGGATGAC

Downstream 100 bases:

>100_bases
CCCTCCGAGGGACGTCCAAGGACAAATCGTCCAACGTTATCCTTAGAAACTCACCCACCGCCACGACGTCTCCCAGATAT
CGTGAGCCGTTCTCACGTAT

Product: transcription regulator

Products: NA

Alternate protein names: Transcription Regulator

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MRWETRREKIVSLLTESREPLTIEEIAYMVGEDDKSKIIEDLEHIAKTLRREGKTLLMEPARCNKCGYVFKSLRVKPPSR
CPKCKSEWIQPPRFTIRE

Sequences:

>Translated_98_residues
MRWETRREKIVSLLTESREPLTIEEIAYMVGEDDKSKIIEDLEHIAKTLRREGKTLLMEPARCNKCGYVFKSLRVKPPSR
CPKCKSEWIQPPRFTIRE
>Mature_98_residues
MRWETRREKIVSLLTESREPLTIEEIAYMVGEDDKSKIIEDLEHIAKTLRREGKTLLMEPARCNKCGYVFKSLRVKPPSR
CPKCKSEWIQPPRFTIRE

Specific function: Unknown

COG id: COG3357

COG function: function code K; Predicted transcriptional regulator containing an HTH domain fused to a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11621; Mature: 11621

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWETRREKIVSLLTESREPLTIEEIAYMVGEDDKSKIIEDLEHIAKTLRREGKTLLMEP
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECC
ARCNKCGYVFKSLRVKPPSRCPKCKSEWIQPPRFTIRE
CCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MRWETRREKIVSLLTESREPLTIEEIAYMVGEDDKSKIIEDLEHIAKTLRREGKTLLMEP
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECC
ARCNKCGYVFKSLRVKPPSRCPKCKSEWIQPPRFTIRE
CCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA