Definition | Methanopyrus kandleri AV19, complete genome. |
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Accession | NC_003551 |
Length | 1,694,969 |
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The map label for this gene is 20094302
Identifier: 20094302
GI number: 20094302
Start: 819624
End: 820862
Strand: Direct
Name: 20094302
Synonym: MK0866
Alternate gene names: NA
Gene position: 819624-820862 (Clockwise)
Preceding gene: 20094301
Following gene: 20094304
Centisome position: 48.36
GC content: 55.93
Gene sequence:
>1239_bases TTGACCGACAGGGAGGAAGTGGTAGAACTCCGCGGTCATATTATCGACTCACTCATTTTCTCCCGGGTACTGGACACTAT CATGGAGATGGGCGGAGATTTTGAAATATTGGAATTCAAGGTAGGGAAGCGTAAAACGGACCCTAGTTTCGCGAAGATCC TCGTCAAGGGGAAGGATCCTGAGCATCTTAGAGAGATAGTCTCCGAACTACGCAAGTACGGGGCGGTCCCCGTTCACACG CAGGAAGTCCGACTGGAGCCGGCTCCGGCGGACGGCGTCTGTCCCCGGGGCTTCTACACAACTACGAACCACCGAACGTT CGTACTTTTCGACGGCGAGTGGATCGAGGTCGAGGACATAGAGATGGACTGCGCGATCGTGGTTTACCCGGAGGAACGCA GGGCAGTGGCTAAACCCATCCGAGAGGTTCGTGAGGGAGAGTTGGTGGTAGTGGGAGACAGAGGAGTGCGCGTGAAGCCC CCCGAGAGACCCCGCGGTAGGACTGGAATCTTCGGCTTCATGGAGAGCGAAGTCTCACCTGAAAAGCCCACACCAACGCT GATCCGAAGAATAGCTGAAGAACTAGAGTGGCACCGAAAGAACGGTAAAATCGTGGTAGTCGTTGGCCCTGCCGTGATTC ACGCTGGAGCCCGTGATGATCTGGCATGGATGATCAGAGAGGGGTACGTAGACGTACTCTTCGCGGGTAATGCCGTGGCT ACGCACGACGTTGAAGCTAGTTTATTCGGGACGTCACTCGGTGTGGATTTGGAGACGGGTGAGCCAGTAAAAGGAGGACA CAGCCACCACCTTTACGCCATCAACGAGATCCGGCGAGTGGGCGGGTTACGCGAAGCCGTCGAGAAAGGAATCCTGAAAG ATGGGATAATGTACGAGTGCATCGTCAACGATGTTCCGTACGTGTTGGCAGGCTCGATACGTGATGATGGTCCTATCCCG GACGTAATCACCGACGTCATGGAAGCCCAAGCGGAGATGCGACGTCATCTCAAGGGGGCCACCCTAGTGCTGATGATGGC GACGATGCTTCACTCGATCGCCACCGGCAACCTCTTGCCTTCCTGGGTCAAGACTATCTGCGTAGATATCAACCCGGCGG TAGTTACGAAGTTGATGGATCGAGGGACCGCCCAGGCTCTGGGAATAGTGTCCGACGTCGGTGTATTCCTACCGGAACTC GTGAAGGAGCTCAAGAGGGTCCGCGACGACGAGGCTTAG
Upstream 100 bases:
>100_bases ATTTCTACGGATCGCCGATCGCCCGTGGTAACCCAAGAATAAAAACTCTCCCATCCTTTCAACCTTGGAGGATGAGGCTA GCAGCGTGAGGGGGCCTCAC
Downstream 100 bases:
>100_bases TCCACTCTTCCACCCTGCGCTCGATGAGTTCTTCCATCACCTTTTTAGCCTCTTCCAGCGCATCCTTCGTCCCCCTGAAG GCTAGGACCGTTGTCTTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MTDREEVVELRGHIIDSLIFSRVLDTIMEMGGDFEILEFKVGKRKTDPSFAKILVKGKDPEHLREIVSELRKYGAVPVHT QEVRLEPAPADGVCPRGFYTTTNHRTFVLFDGEWIEVEDIEMDCAIVVYPEERRAVAKPIREVREGELVVVGDRGVRVKP PERPRGRTGIFGFMESEVSPEKPTPTLIRRIAEELEWHRKNGKIVVVVGPAVIHAGARDDLAWMIREGYVDVLFAGNAVA THDVEASLFGTSLGVDLETGEPVKGGHSHHLYAINEIRRVGGLREAVEKGILKDGIMYECIVNDVPYVLAGSIRDDGPIP DVITDVMEAQAEMRRHLKGATLVLMMATMLHSIATGNLLPSWVKTICVDINPAVVTKLMDRGTAQALGIVSDVGVFLPEL VKELKRVRDDEA
Sequences:
>Translated_412_residues MTDREEVVELRGHIIDSLIFSRVLDTIMEMGGDFEILEFKVGKRKTDPSFAKILVKGKDPEHLREIVSELRKYGAVPVHT QEVRLEPAPADGVCPRGFYTTTNHRTFVLFDGEWIEVEDIEMDCAIVVYPEERRAVAKPIREVREGELVVVGDRGVRVKP PERPRGRTGIFGFMESEVSPEKPTPTLIRRIAEELEWHRKNGKIVVVVGPAVIHAGARDDLAWMIREGYVDVLFAGNAVA THDVEASLFGTSLGVDLETGEPVKGGHSHHLYAINEIRRVGGLREAVEKGILKDGIMYECIVNDVPYVLAGSIRDDGPIP DVITDVMEAQAEMRRHLKGATLVLMMATMLHSIATGNLLPSWVKTICVDINPAVVTKLMDRGTAQALGIVSDVGVFLPEL VKELKRVRDDEA >Mature_411_residues TDREEVVELRGHIIDSLIFSRVLDTIMEMGGDFEILEFKVGKRKTDPSFAKILVKGKDPEHLREIVSELRKYGAVPVHTQ EVRLEPAPADGVCPRGFYTTTNHRTFVLFDGEWIEVEDIEMDCAIVVYPEERRAVAKPIREVREGELVVVGDRGVRVKPP ERPRGRTGIFGFMESEVSPEKPTPTLIRRIAEELEWHRKNGKIVVVVGPAVIHAGARDDLAWMIREGYVDVLFAGNAVAT HDVEASLFGTSLGVDLETGEPVKGGHSHHLYAINEIRRVGGLREAVEKGILKDGIMYECIVNDVPYVLAGSIRDDGPIPD VITDVMEAQAEMRRHLKGATLVLMMATMLHSIATGNLLPSWVKTICVDINPAVVTKLMDRGTAQALGIVSDVGVFLPELV KELKRVRDDEA
Specific function: Unknown
COG id: COG1915
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y866_METKA (Q8TX14)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614149.1 - ProteinModelPortal: Q8TX14 - SMR: Q8TX14 - GeneID: 1476967 - GenomeReviews: AE009439_GR - KEGG: mka:MK0866 - NMPDR: fig|190192.1.peg.862 - HOGENOM: HBG481668 - OMA: ATHDIES - ProtClustDB: CLSK862676 - BioCyc: MKAN190192:MK0866-MONOMER - InterPro: IPR005239 - InterPro: IPR007545 - TIGRFAMs: TIGR00300
Pfam domain/function: PF04455 Saccharop_dh_N
EC number: NA
Molecular weight: Translated: 45747; Mature: 45616
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDREEVVELRGHIIDSLIFSRVLDTIMEMGGDFEILEFKVGKRKTDPSFAKILVKGKDP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHEEEEECCCCH EHLREIVSELRKYGAVPVHTQEVRLEPAPADGVCPRGFYTTTNHRTFVLFDGEWIEVEDI HHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCCCCCCEEECCCEEEEEECCCEEEEEEC EMDCAIVVYPEERRAVAKPIREVREGELVVVGDRGVRVKPPERPRGRTGIFGFMESEVSP CCCEEEEEECHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCCCCCCCEEEEHHCCCCC EKPTPTLIRRIAEELEWHRKNGKIVVVVGPAVIHAGARDDLAWMIREGYVDVLFAGNAVA CCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHEECCCCCHHHHHHHCCCEEEEEECCEEE THDVEASLFGTSLGVDLETGEPVKGGHSHHLYAINEIRRVGGLREAVEKGILKDGIMYEC ECCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEE IVNDVPYVLAGSIRDDGPIPDVITDVMEAQAEMRRHLKGATLVLMMATMLHSIATGNLLP HHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCH SWVKTICVDINPAVVTKLMDRGTAQALGIVSDVGVFLPELVKELKRVRDDEA HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TDREEVVELRGHIIDSLIFSRVLDTIMEMGGDFEILEFKVGKRKTDPSFAKILVKGKDP CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHEEEEECCCCH EHLREIVSELRKYGAVPVHTQEVRLEPAPADGVCPRGFYTTTNHRTFVLFDGEWIEVEDI HHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCCCCCCEEECCCEEEEEECCCEEEEEEC EMDCAIVVYPEERRAVAKPIREVREGELVVVGDRGVRVKPPERPRGRTGIFGFMESEVSP CCCEEEEEECHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCCCCCCCEEEEHHCCCCC EKPTPTLIRRIAEELEWHRKNGKIVVVVGPAVIHAGARDDLAWMIREGYVDVLFAGNAVA CCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHEECCCCCHHHHHHHCCCEEEEEECCEEE THDVEASLFGTSLGVDLETGEPVKGGHSHHLYAINEIRRVGGLREAVEKGILKDGIMYEC ECCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEE IVNDVPYVLAGSIRDDGPIPDVITDVMEAQAEMRRHLKGATLVLMMATMLHSIATGNLLP HHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCH SWVKTICVDINPAVVTKLMDRGTAQALGIVSDVGVFLPELVKELKRVRDDEA HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014