| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094270
Identifier: 20094270
GI number: 20094270
Start: 793046
End: 794548
Strand: Direct
Name: 20094270
Synonym: MK0834
Alternate gene names: NA
Gene position: 793046-794548 (Clockwise)
Preceding gene: 20094264
Following gene: 20094271
Centisome position: 46.79
GC content: 56.42
Gene sequence:
>1503_bases TTGGCGACAGTAGTAATGAAGAGGCTGATCGCGGTCACCTTGGTCGCCGGCTTAACAATATTATCCTTCTGCGGATACGA ATCGGTCGCAAAAGCTCCCACGTGGAAAGACGCAGAGCGCGCCTTGTATCACTACGGTCTATGCTTGGTCCTGTCAGCGT GTTCGATCCGGCGGGTTCCAGGGTACTCGTCCGTGAACATACTACTACATGGGTACTCCGGGACGTCCCCCTCTCCGGTT CCCCTCCGGTGGTGGCTCGCATGGCAGACGGCCAAAGTGATCGGCCTCTCCATACTACTTTCTGGGTTTCCGGCCCTGGA GGTGCTGAAATGGATACTCTCCGGTGATCCGAGTCGGTGGGTACTCGCCGCGGCGGTACTGTTCGGACTTGTTTTCAAGG TCCGAGCGTTCATGAGTGTACTGTCTCAGCTAGCCGTCACTATACTTGACATCTCCGAGTATCGGGCCGATAAGAGGCTC CTACAGTCCGCCTTGGTTTCTCACGGATTACGCACGATCTCGTTGCTCCTCGTGTATCTAGCCGTTGTGCTTATCACGTA CCCCGTGATCTCACTGTGTCTTCTTCCAATGATCATCACACTAGGCTGGATCGCCTGGTACCTGCACAAGATGTCGCGTC TTCCGTGGAAGGACCACATCCAGGTGTGTCGAGTGCTCAAAAACCGCCTCAGGCCCGTCCTGGTGAGTTCCCTACTACTC TGCTCCGTAACCTTCACCTTAGGCCTGACTACGGATTATTTTACTAACGTCAGTGTTCGAATCTGGGAGTACGTCTCGGG GGAGCACGTCAGGACGGTCCACACCCTCGTACCTGCGGTGCTCTTGGATCAAACCTCGCTGCGGCGAATCGCCGAAACAC ACCGGGCGGATATGTCTTTCCTAACCCTAGACGTACTGCGGGATAGGGTGGTCGTGCTCATAGGAGGGGAAAGTGGGCAA GCCACCGCCATAGATCCAAGAACCGGTAGATCGTTGGGATCACAGAAGCTGCCGCCCGAACTCCGTGAGTCGAGTGTCGA GGCTCTAACCGAGGACCTGGAGTACGCTTATCCGTACCTTCGGGCGGGATTGCCCGTACTGTACTCTGGTAAGCTGACGG TATCCGGATGGGTCGTCGCCGACGTTTGGATACCGTTCGCCGGCTACACTCTGATGATCCCTGAAATCACGTTAGAAGTT CGGGGCAGGGGGTTCAAACCCACCGAAGCTCCGGCGTTCCCCGGCGTTGATTGGGGCATTACCTGGTATCCCGCACGTCT GGACGGTCGGATCGTTCCCGTGGTAATCCCCTCGACGGTCTGCTTCACTAGTTCCATCAGGGTGCCCGGAAGCCTCGTAA TACCGCTGTACGGACCCACCGCGGTCCGAGTGTGGCTCCACCAGCCCTGTTTCATCGAGATCGAGCGTGATCGTGTATAC GTACTGAAACCCGAGTACTACCCGGATGGTATCTTAATGAAAGTCGAGAAAATCCGGGTGTAG
Upstream 100 bases:
>100_bases ACGACACAGTACTTGCCCGCCTCTCTACCCGCGGTCTTCACGCAGATCCTTCCCACCTCGATCGGCGCCGGCATGCAGAT CACCCCGGGGAGTTCGTCGA
Downstream 100 bases:
>100_bases GGGAAACGAGCGTGATAACCGTAGTGTTCACGGGGTACAAGGGTGGGAAGCTCAGGTTCGTGCTGGCAGAGGGTGACCCG GAGGACGGTGCCGAGATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MATVVMKRLIAVTLVAGLTILSFCGYESVAKAPTWKDAERALYHYGLCLVLSACSIRRVPGYSSVNILLHGYSGTSPSPV PLRWWLAWQTAKVIGLSILLSGFPALEVLKWILSGDPSRWVLAAAVLFGLVFKVRAFMSVLSQLAVTILDISEYRADKRL LQSALVSHGLRTISLLLVYLAVVLITYPVISLCLLPMIITLGWIAWYLHKMSRLPWKDHIQVCRVLKNRLRPVLVSSLLL CSVTFTLGLTTDYFTNVSVRIWEYVSGEHVRTVHTLVPAVLLDQTSLRRIAETHRADMSFLTLDVLRDRVVVLIGGESGQ ATAIDPRTGRSLGSQKLPPELRESSVEALTEDLEYAYPYLRAGLPVLYSGKLTVSGWVVADVWIPFAGYTLMIPEITLEV RGRGFKPTEAPAFPGVDWGITWYPARLDGRIVPVVIPSTVCFTSSIRVPGSLVIPLYGPTAVRVWLHQPCFIEIERDRVY VLKPEYYPDGILMKVEKIRV
Sequences:
>Translated_500_residues MATVVMKRLIAVTLVAGLTILSFCGYESVAKAPTWKDAERALYHYGLCLVLSACSIRRVPGYSSVNILLHGYSGTSPSPV PLRWWLAWQTAKVIGLSILLSGFPALEVLKWILSGDPSRWVLAAAVLFGLVFKVRAFMSVLSQLAVTILDISEYRADKRL LQSALVSHGLRTISLLLVYLAVVLITYPVISLCLLPMIITLGWIAWYLHKMSRLPWKDHIQVCRVLKNRLRPVLVSSLLL CSVTFTLGLTTDYFTNVSVRIWEYVSGEHVRTVHTLVPAVLLDQTSLRRIAETHRADMSFLTLDVLRDRVVVLIGGESGQ ATAIDPRTGRSLGSQKLPPELRESSVEALTEDLEYAYPYLRAGLPVLYSGKLTVSGWVVADVWIPFAGYTLMIPEITLEV RGRGFKPTEAPAFPGVDWGITWYPARLDGRIVPVVIPSTVCFTSSIRVPGSLVIPLYGPTAVRVWLHQPCFIEIERDRVY VLKPEYYPDGILMKVEKIRV >Mature_499_residues ATVVMKRLIAVTLVAGLTILSFCGYESVAKAPTWKDAERALYHYGLCLVLSACSIRRVPGYSSVNILLHGYSGTSPSPVP LRWWLAWQTAKVIGLSILLSGFPALEVLKWILSGDPSRWVLAAAVLFGLVFKVRAFMSVLSQLAVTILDISEYRADKRLL QSALVSHGLRTISLLLVYLAVVLITYPVISLCLLPMIITLGWIAWYLHKMSRLPWKDHIQVCRVLKNRLRPVLVSSLLLC SVTFTLGLTTDYFTNVSVRIWEYVSGEHVRTVHTLVPAVLLDQTSLRRIAETHRADMSFLTLDVLRDRVVVLIGGESGQA TAIDPRTGRSLGSQKLPPELRESSVEALTEDLEYAYPYLRAGLPVLYSGKLTVSGWVVADVWIPFAGYTLMIPEITLEVR GRGFKPTEAPAFPGVDWGITWYPARLDGRIVPVVIPSTVCFTSSIRVPGSLVIPLYGPTAVRVWLHQPCFIEIERDRVYV LKPEYYPDGILMKVEKIRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55773; Mature: 55641
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVVMKRLIAVTLVAGLTILSFCGYESVAKAPTWKDAERALYHYGLCLVLSACSIRRVP CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC GYSSVNILLHGYSGTSPSPVPLRWWLAWQTAKVIGLSILLSGFPALEVLKWILSGDPSRW CCCEEEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHH VLAAAVLFGLVFKVRAFMSVLSQLAVTILDISEYRADKRLLQSALVSHGLRTISLLLVYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AVVLITYPVISLCLLPMIITLGWIAWYLHKMSRLPWKDHIQVCRVLKNRLRPVLVSSLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH CSVTFTLGLTTDYFTNVSVRIWEYVSGEHVRTVHTLVPAVLLDQTSLRRIAETHRADMSF HHHHHHHCCCHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHH LTLDVLRDRVVVLIGGESGQATAIDPRTGRSLGSQKLPPELRESSVEALTEDLEYAYPYL HHHHHHHCCEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RAGLPVLYSGKLTVSGWVVADVWIPFAGYTLMIPEITLEVRGRGFKPTEAPAFPGVDWGI HCCCCEEEECEEEECCEEEEEEHHCCCCEEEEECEEEEEECCCCCCCCCCCCCCCCCCCC TWYPARLDGRIVPVVIPSTVCFTSSIRVPGSLVIPLYGPTAVRVWLHQPCFIEIERDRVY EEEEEECCCEEEEEEECCHHHEECCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCEEE VLKPEYYPDGILMKVEKIRV EECCCCCCCCCEEEEEECCC >Mature Secondary Structure ATVVMKRLIAVTLVAGLTILSFCGYESVAKAPTWKDAERALYHYGLCLVLSACSIRRVP HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC GYSSVNILLHGYSGTSPSPVPLRWWLAWQTAKVIGLSILLSGFPALEVLKWILSGDPSRW CCCEEEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHH VLAAAVLFGLVFKVRAFMSVLSQLAVTILDISEYRADKRLLQSALVSHGLRTISLLLVYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AVVLITYPVISLCLLPMIITLGWIAWYLHKMSRLPWKDHIQVCRVLKNRLRPVLVSSLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH CSVTFTLGLTTDYFTNVSVRIWEYVSGEHVRTVHTLVPAVLLDQTSLRRIAETHRADMSF HHHHHHHCCCHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHH LTLDVLRDRVVVLIGGESGQATAIDPRTGRSLGSQKLPPELRESSVEALTEDLEYAYPYL HHHHHHHCCEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RAGLPVLYSGKLTVSGWVVADVWIPFAGYTLMIPEITLEVRGRGFKPTEAPAFPGVDWGI HCCCCEEEECEEEECCEEEEEEHHCCCCEEEEECEEEEEECCCCCCCCCCCCCCCCCCCC TWYPARLDGRIVPVVIPSTVCFTSSIRVPGSLVIPLYGPTAVRVWLHQPCFIEIERDRVY EEEEEECCCEEEEEEECCHHHEECCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCEEE VLKPEYYPDGILMKVEKIRV EECCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA