| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094231
Identifier: 20094231
GI number: 20094231
Start: 753993
End: 755180
Strand: Direct
Name: 20094231
Synonym: MK0794
Alternate gene names: NA
Gene position: 753993-755180 (Clockwise)
Preceding gene: 20094230
Following gene: 20094232
Centisome position: 44.48
GC content: 61.2
Gene sequence:
>1188_bases CTGACTTCCACCTCCGTCGTCATCGTTTCGCGTGAGATAACGAAGGGGGTCTCCGAGATCCGAGTAGGGCTCGTGATCCA CGGTCCTACGGTGATCGACACGGGTTGGGCCGAGCGTATCCTTCGCTCCCTGAAAAGGCTGGGCGAGGTCCGTGCTAAGC TCGGAGGCACCACCGGTTACGTGGCGCTCTTAGACGCGGGACTAGACTCCGTGGTGGAGTTCGACCGGAAGCTACCGAGC GAGTGCTTGTCCGAGCTGAACGAGTGGGCCGACGTTCTAGTCCTCACGAACCACGGTAAAAGCCGAGAAAGCGGTCTCGC TTTCGCGGAACAGGTACTCTCCAGGGCCGAAGGTGTCGACTCGCTAGTACAGGCAGAGCGCCCGGGCGAACCCGACGGTG GTATCGTCCTGTGGAACCCCGGCGACGCGGAGCGGACGGTGGCTGAGCACCTCCGGGAGGATTTGGGGTTGAAGATTACC GAGGTTCGGACTGTTCGGACCGAGAAAGGCGGCGGAATTGGGAAGTCCCGGAGGGTCGCCTGTGTCGAGCCGGGTGATCG CATTCTAGTGAACGGAATCACGGTAGGTGTCGCCGAATCCCGGAACGTGGAGCTGGTGTTCGATGACAGCGGGTACTTGG TGGAGATTCGCGGCGGCAGGATCAAGCCGGAAGGTGTAGAGCGCCTCGGCCGGGTGGATCCTGAGCGCGTGGTGGTGAAA ACGGACCGCAGACTTAGGAGAACTGAGCCGGAGCGTAAGAGGGTGAAGAGTGGGCCCGAAAGGATCCATCGGGTTCTACT CGTCGACCACGACGCGGAGCGTAAAGTCGAAGATATGCGTCGATCGGACGCTGTCGTCTCCGTCGGGGACGACACAACTT GCGTGTGCGCGGAGCTAGGTGATCGGCTGGGAGTTTGGGTGATAGGGCTCGTCGATCTCGATCCGGACGGATGGGTTCGT GACGATACGCGCGAGTCCCTGCGCAGCTCCGAGAACCTAGCGGCCCTACTAGTGTGTGAGCGGGACGACGATGCCGGGAA ATTGGTTCGAGGGCGGTTCTTTCGCGACCGAGAGATGAGGGTGCTCGATCCCCCCGTGACAGTTGGGGAGCTCGTCGAAG AGGTGAAAGAGTGCGTAAAGGAGGTTCTCAAGTGCGTGTACCACAAGGCGAAAGAGACCTCAGCGTGA
Upstream 100 bases:
>100_bases GTTCAAAACCTACGGAGAGCACGGGCAGCTTGAGTCGGGCCCCGTCGGTCACTTCAACCAGACCATCGAGGTCGTCGATC GGTAGAATCCCGGTCTCTCG
Downstream 100 bases:
>100_bases GCTGGGTTCCTCACCACTCGGACCCGCGACTTCTCGTCATCGGTGGGGGTTCGGCTTTGAACCTCCGGGAACTCGCCCGC GAGCTCCGGTCCTTTGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTSTSVVIVSREITKGVSEIRVGLVIHGPTVIDTGWAERILRSLKRLGEVRAKLGGTTGYVALLDAGLDSVVEFDRKLPS ECLSELNEWADVLVLTNHGKSRESGLAFAEQVLSRAEGVDSLVQAERPGEPDGGIVLWNPGDAERTVAEHLREDLGLKIT EVRTVRTEKGGGIGKSRRVACVEPGDRILVNGITVGVAESRNVELVFDDSGYLVEIRGGRIKPEGVERLGRVDPERVVVK TDRRLRRTEPERKRVKSGPERIHRVLLVDHDAERKVEDMRRSDAVVSVGDDTTCVCAELGDRLGVWVIGLVDLDPDGWVR DDTRESLRSSENLAALLVCERDDDAGKLVRGRFFRDREMRVLDPPVTVGELVEEVKECVKEVLKCVYHKAKETSA
Sequences:
>Translated_395_residues MTSTSVVIVSREITKGVSEIRVGLVIHGPTVIDTGWAERILRSLKRLGEVRAKLGGTTGYVALLDAGLDSVVEFDRKLPS ECLSELNEWADVLVLTNHGKSRESGLAFAEQVLSRAEGVDSLVQAERPGEPDGGIVLWNPGDAERTVAEHLREDLGLKIT EVRTVRTEKGGGIGKSRRVACVEPGDRILVNGITVGVAESRNVELVFDDSGYLVEIRGGRIKPEGVERLGRVDPERVVVK TDRRLRRTEPERKRVKSGPERIHRVLLVDHDAERKVEDMRRSDAVVSVGDDTTCVCAELGDRLGVWVIGLVDLDPDGWVR DDTRESLRSSENLAALLVCERDDDAGKLVRGRFFRDREMRVLDPPVTVGELVEEVKECVKEVLKCVYHKAKETSA >Mature_394_residues TSTSVVIVSREITKGVSEIRVGLVIHGPTVIDTGWAERILRSLKRLGEVRAKLGGTTGYVALLDAGLDSVVEFDRKLPSE CLSELNEWADVLVLTNHGKSRESGLAFAEQVLSRAEGVDSLVQAERPGEPDGGIVLWNPGDAERTVAEHLREDLGLKITE VRTVRTEKGGGIGKSRRVACVEPGDRILVNGITVGVAESRNVELVFDDSGYLVEIRGGRIKPEGVERLGRVDPERVVVKT DRRLRRTEPERKRVKSGPERIHRVLLVDHDAERKVEDMRRSDAVVSVGDDTTCVCAELGDRLGVWVIGLVDLDPDGWVRD DTRESLRSSENLAALLVCERDDDAGKLVRGRFFRDREMRVLDPPVTVGELVEEVKECVKEVLKCVYHKAKETSA
Specific function: Unknown
COG id: COG4069
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012032 [H]
Pfam domain/function: PF09890 DUF2117 [H]
EC number: NA
Molecular weight: Translated: 43647; Mature: 43516
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTSVVIVSREITKGVSEIRVGLVIHGPTVIDTGWAERILRSLKRLGEVRAKLGGTTGY CCCCEEEEEEHHHHCCHHHEEEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCE VALLDAGLDSVVEFDRKLPSECLSELNEWADVLVLTNHGKSRESGLAFAEQVLSRAEGVD EHHHHHCHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHCHH SLVQAERPGEPDGGIVLWNPGDAERTVAEHLREDLGLKITEVRTVRTEKGGGIGKSRRVA HHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCEEE CVEPGDRILVNGITVGVAESRNVELVFDDSGYLVEIRGGRIKPEGVERLGRVDPERVVVK EECCCCEEEEEEEEEEEECCCCEEEEECCCCCEEEECCCCCCHHHHHHHCCCCHHHEEEE TDRRLRRTEPERKRVKSGPERIHRVLLVDHDAERKVEDMRRSDAVVSVGDDTTCVCAELG CCHHHHCCCHHHHHHHCCHHHHHEEEEECCCHHHHHHHHHHCCCEEEECCCCEEEHHHHC DRLGVWVIGLVDLDPDGWVRDDTRESLRSSENLAALLVCERDDDAGKLVRGRFFRDREMR CCCCEEEEEEEEECCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCE VLDPPVTVGELVEEVKECVKEVLKCVYHKAKETSA EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSTSVVIVSREITKGVSEIRVGLVIHGPTVIDTGWAERILRSLKRLGEVRAKLGGTTGY CCCEEEEEEHHHHCCHHHEEEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCE VALLDAGLDSVVEFDRKLPSECLSELNEWADVLVLTNHGKSRESGLAFAEQVLSRAEGVD EHHHHHCHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHCHH SLVQAERPGEPDGGIVLWNPGDAERTVAEHLREDLGLKITEVRTVRTEKGGGIGKSRRVA HHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCEEE CVEPGDRILVNGITVGVAESRNVELVFDDSGYLVEIRGGRIKPEGVERLGRVDPERVVVK EECCCCEEEEEEEEEEEECCCCEEEEECCCCCEEEECCCCCCHHHHHHHCCCCHHHEEEE TDRRLRRTEPERKRVKSGPERIHRVLLVDHDAERKVEDMRRSDAVVSVGDDTTCVCAELG CCHHHHCCCHHHHHHHCCHHHHHEEEEECCCHHHHHHHHHHCCCEEEECCCCEEEHHHHC DRLGVWVIGLVDLDPDGWVRDDTRESLRSSENLAALLVCERDDDAGKLVRGRFFRDREMR CCCCEEEEEEEEECCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCE VLDPPVTVGELVEEVKECVKEVLKCVYHKAKETSA EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]