| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094230
Identifier: 20094230
GI number: 20094230
Start: 752727
End: 753977
Strand: Direct
Name: 20094230
Synonym: MK0793
Alternate gene names: NA
Gene position: 752727-753977 (Clockwise)
Preceding gene: 20094226
Following gene: 20094231
Centisome position: 44.41
GC content: 60.35
Gene sequence:
>1251_bases ATGCCGTTCTTGCTGGAGGGGGCACGTCAGTTGAAGACTATAGAGGTCGGTGTGGCTTACGGGAAGGATCCGCACGCGGT CGTGGAGGACGCGATAGATCAGCTAACGGAGGATCCCAACTTAGGGCTGGTATTCTTCTCACCCAAGCACATCGAGGAAA TCGAGAGTGCCGTGGGCAGCCTCCCAGAAGGATGCAAGGTGATAGGGTGTTCGACGGCCGGTGAGCTCACTCCGGATGGG TACACCTATGGCACAGTTATCGTGGCGTTAATCTCCAGCCCGTACCTCGCCGTGGAAACGCACCGCATTACCTTCGAGCG TGAAGACCCGAAGCACGCTAGGGAGATAGGCCGCAACCTCGTGCTCGGAGCGATGGAGAAGCTACGTAACCCGGGCCCCT GTCTCGACATCAACTTCAACGCCATGCTCACGAGTCTCAGTGAGGGAAGACCCATCAGGGCGCTTCCCTACTTCATAATC GAGCTCGTCGAGGGCCTGGTTCCCGCCATTGATTACTACATGGACGGTATCAACGAGGTGGTCCAGAAGTACAAGTTCCT CGAGGTGTACGGTGGGGCGGCCGGTGACGACCTACGTCTCGAGCGTACGTACGTGCTCGAGGGGCGTACCTTGTGTCCTG AAGGGTCGGCCGTGGTAGCGTTCGGCTCTACGGCTCTCAAGATCGGCGGGGCCCTAGAGTGCGGATTCGAGCCGGTGTAT GAGGATAGGTTCCCGGTCACCAAGGCCGTACCCGAGGAGCGACGGATCGTGGAGTTCGACGGCGAACCGGCCGCCGATTA TTACGCCGATGTGGTGGGGAAACCCGTCGAGGAACTCGATGACTCCGTGTTCATGTGGAACCCGCTTGGATGGGAGATCT TCGGCCGGGAGATCATCGTGCGCGAGCCGGCGTTCGTGGAAGACGACGGGTCGATGATCTTCCATTCGAGGTCACCGGCG GCGGGAGCGTTGATCCGGCTTGAACCGACTGAGGAGAACATGCGTGAAACCGCGCGGCGTGTCACGGAGCGGGCGATGAG GAGGGCGGACATCCGAGATCCCGAGGAGATCGCGCTGGTGCTCGTGTTCGACTGTGCTCACCGGGACTGTGACGCCCAAT ACGATGCCATTCGGGAAGTGGTGGGCGACGATGTGCCGATCGTTGGGTTCAAAACCTACGGAGAGCACGGGCAGCTTGAG TCGGGCCCCGTCGGTCACTTCAACCAGACCATCGAGGTCGTCGATCGGTAG
Upstream 100 bases:
>100_bases GACGAGTCTACCGCGCTCCATAGCGGTGCCCGCTCCCTTAGCCGGCCGAACCTGTATATAAACACTAAACGCGTCAACAA ACGGAGTGGAAAGTTAACTT
Downstream 100 bases:
>100_bases AATCCCGGTCTCTCGCTGACTTCCACCTCCGTCGTCATCGTTTCGCGTGAGATAACGAAGGGGGTCTCCGAGATCCGAGT AGGGCTCGTGATCCACGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MPFLLEGARQLKTIEVGVAYGKDPHAVVEDAIDQLTEDPNLGLVFFSPKHIEEIESAVGSLPEGCKVIGCSTAGELTPDG YTYGTVIVALISSPYLAVETHRITFEREDPKHAREIGRNLVLGAMEKLRNPGPCLDINFNAMLTSLSEGRPIRALPYFII ELVEGLVPAIDYYMDGINEVVQKYKFLEVYGGAAGDDLRLERTYVLEGRTLCPEGSAVVAFGSTALKIGGALECGFEPVY EDRFPVTKAVPEERRIVEFDGEPAADYYADVVGKPVEELDDSVFMWNPLGWEIFGREIIVREPAFVEDDGSMIFHSRSPA AGALIRLEPTEENMRETARRVTERAMRRADIRDPEEIALVLVFDCAHRDCDAQYDAIREVVGDDVPIVGFKTYGEHGQLE SGPVGHFNQTIEVVDR
Sequences:
>Translated_416_residues MPFLLEGARQLKTIEVGVAYGKDPHAVVEDAIDQLTEDPNLGLVFFSPKHIEEIESAVGSLPEGCKVIGCSTAGELTPDG YTYGTVIVALISSPYLAVETHRITFEREDPKHAREIGRNLVLGAMEKLRNPGPCLDINFNAMLTSLSEGRPIRALPYFII ELVEGLVPAIDYYMDGINEVVQKYKFLEVYGGAAGDDLRLERTYVLEGRTLCPEGSAVVAFGSTALKIGGALECGFEPVY EDRFPVTKAVPEERRIVEFDGEPAADYYADVVGKPVEELDDSVFMWNPLGWEIFGREIIVREPAFVEDDGSMIFHSRSPA AGALIRLEPTEENMRETARRVTERAMRRADIRDPEEIALVLVFDCAHRDCDAQYDAIREVVGDDVPIVGFKTYGEHGQLE SGPVGHFNQTIEVVDR >Mature_415_residues PFLLEGARQLKTIEVGVAYGKDPHAVVEDAIDQLTEDPNLGLVFFSPKHIEEIESAVGSLPEGCKVIGCSTAGELTPDGY TYGTVIVALISSPYLAVETHRITFEREDPKHAREIGRNLVLGAMEKLRNPGPCLDINFNAMLTSLSEGRPIRALPYFIIE LVEGLVPAIDYYMDGINEVVQKYKFLEVYGGAAGDDLRLERTYVLEGRTLCPEGSAVVAFGSTALKIGGALECGFEPVYE DRFPVTKAVPEERRIVEFDGEPAADYYADVVGKPVEELDDSVFMWNPLGWEIFGREIIVREPAFVEDDGSMIFHSRSPAA GALIRLEPTEENMRETARRVTERAMRRADIRDPEEIALVLVFDCAHRDCDAQYDAIREVVGDDVPIVGFKTYGEHGQLES GPVGHFNQTIEVVDR
Specific function: Unknown
COG id: COG3287
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46060; Mature: 45928
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFLLEGARQLKTIEVGVAYGKDPHAVVEDAIDQLTEDPNLGLVFFSPKHIEEIESAVGS CCCHHHCHHHEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCC LPEGCKVIGCSTAGELTPDGYTYGTVIVALISSPYLAVETHRITFEREDPKHAREIGRNL CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHHHHHHHHH VLGAMEKLRNPGPCLDINFNAMLTSLSEGRPIRALPYFIIELVEGLVPAIDYYMDGINEV HHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQKYKFLEVYGGAAGDDLRLERTYVLEGRTLCPEGSAVVAFGSTALKIGGALECGFEPVY HHHHHHHHEECCCCCCCEEEEEEEEECCCEECCCCCEEEEECCEEEEECCEEECCCCCCC EDRFPVTKAVPEERRIVEFDGEPAADYYADVVGKPVEELDDSVFMWNPLGWEIFGREIIV CCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCHHHCCCCEEEECCCCCEEECCEEEE REPAFVEDDGSMIFHSRSPAAGALIRLEPTEENMRETARRVTERAMRRADIRDPEEIALV ECCCEEECCCCEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHEEEE LVFDCAHRDCDAQYDAIREVVGDDVPIVGFKTYGEHGQLESGPVGHFNQTIEVVDR EEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHEECC >Mature Secondary Structure PFLLEGARQLKTIEVGVAYGKDPHAVVEDAIDQLTEDPNLGLVFFSPKHIEEIESAVGS CCHHHCHHHEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCC LPEGCKVIGCSTAGELTPDGYTYGTVIVALISSPYLAVETHRITFEREDPKHAREIGRNL CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHHHHHHHHH VLGAMEKLRNPGPCLDINFNAMLTSLSEGRPIRALPYFIIELVEGLVPAIDYYMDGINEV HHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQKYKFLEVYGGAAGDDLRLERTYVLEGRTLCPEGSAVVAFGSTALKIGGALECGFEPVY HHHHHHHHEECCCCCCCEEEEEEEEECCCEECCCCCEEEEECCEEEEECCEEECCCCCCC EDRFPVTKAVPEERRIVEFDGEPAADYYADVVGKPVEELDDSVFMWNPLGWEIFGREIIV CCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCHHHCCCCEEEECCCCCEEECCEEEE REPAFVEDDGSMIFHSRSPAAGALIRLEPTEENMRETARRVTERAMRRADIRDPEEIALV ECCCEEECCCCEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHEEEE LVFDCAHRDCDAQYDAIREVVGDDVPIVGFKTYGEHGQLESGPVGHFNQTIEVVDR EEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA