| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20094216
Identifier: 20094216
GI number: 20094216
Start: 740929
End: 741837
Strand: Direct
Name: 20094216
Synonym: MK0779
Alternate gene names: NA
Gene position: 740929-741837 (Clockwise)
Preceding gene: 20094215
Following gene: 20094217
Centisome position: 43.71
GC content: 55.23
Gene sequence:
>909_bases TTGAGAGAAGAAGTCGCGTCCAGCCCTCAAGGGCTCGGACTCGAGATATTGGCTAAACACAAAGTGTCTGACTTCGTTCG TCACGGTGCCATTGCGGTGAAACCCGATGAACCGCTATGGAACGCGTTGAAGGCTATGGTCACTCACGGCATTCACGGTG CGGCGGTGATGGAGGACTCCAAAATAGTCGGAGCGTTCGAGGAGGATGATTTGCTCCGTGCCCTCCGTGCGCTCGAGGAG GACGCTCTCGCGGCCGAAGTTAAGCGGTTCATGAAACCGGCCGTGGTGGTGAAGTCGAGCGATACTTTCCAAAACGCCAT GGTTGAAATGCTGAAAGGCAACACGACCCGGGCATTCGTACGTTCTTCCGGTCTCCTAAGGAGCGGCGTGTACGGTGTGA TCTCCGCTTCTGATATTGTACGAGTACTTACGGGGGATTACAGGGGGTTCAGGGCTCCCGGCAACACGGATCGACCGGTT TCGCCTCCGAAAGTCGGTGACATATTCTGGCCCGGAAGTGTAGCCATCAAGCAAGTGATTCGGAACTCTCCTTTGACCCT GGACGCTTCCAGCTCCGTTGCCGATGTCGCGAGGTGTATAAGCGAGAAGGGTCGACACTACGCGGTCCTCCTGGAGGGGG AGTCCCCGATCGGCCGCGCCGGTGACAAGGACGTGATGGGTGCCGCTCTCGACGCGATTCTAAACCGAAGAGATTTACAC GACCTCACGGCCAGAAATTATCTGCAAGAAATGGTGGTGGTGCCTCCCGAGACGCCTCTACATGAGGCTCTTTGGGAAGT TATCGACAAAATGTCAGATAGAATATACGTGATGGATGGCAGGAAGTTAACCGGGGTCGTGCCATTAATAGATGCCGTCT ACACACTGGCGAAAGTAGCTAGTGATTGA
Upstream 100 bases:
>100_bases GTTGCGCGCGTATCGGGAGGTGATTAAGGGATGATCATTAACTCCGTCGGTAGAAAGGTGCTCTAACGTCTGAGAATTTG AGGGGTGGTGTCCATAGGCT
Downstream 100 bases:
>100_bases CTTCTGACAAGGTATACAATCGCTCTGGCGATCATCGGGGGTGGGGCTTTTGGTCGACCTGGACTGCTGCGTAGTGTGTG GTGACAGTCCGGAAAGTATC
Product: CBS-domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MREEVASSPQGLGLEILAKHKVSDFVRHGAIAVKPDEPLWNALKAMVTHGIHGAAVMEDSKIVGAFEEDDLLRALRALEE DALAAEVKRFMKPAVVVKSSDTFQNAMVEMLKGNTTRAFVRSSGLLRSGVYGVISASDIVRVLTGDYRGFRAPGNTDRPV SPPKVGDIFWPGSVAIKQVIRNSPLTLDASSSVADVARCISEKGRHYAVLLEGESPIGRAGDKDVMGAALDAILNRRDLH DLTARNYLQEMVVVPPETPLHEALWEVIDKMSDRIYVMDGRKLTGVVPLIDAVYTLAKVASD
Sequences:
>Translated_302_residues MREEVASSPQGLGLEILAKHKVSDFVRHGAIAVKPDEPLWNALKAMVTHGIHGAAVMEDSKIVGAFEEDDLLRALRALEE DALAAEVKRFMKPAVVVKSSDTFQNAMVEMLKGNTTRAFVRSSGLLRSGVYGVISASDIVRVLTGDYRGFRAPGNTDRPV SPPKVGDIFWPGSVAIKQVIRNSPLTLDASSSVADVARCISEKGRHYAVLLEGESPIGRAGDKDVMGAALDAILNRRDLH DLTARNYLQEMVVVPPETPLHEALWEVIDKMSDRIYVMDGRKLTGVVPLIDAVYTLAKVASD >Mature_302_residues MREEVASSPQGLGLEILAKHKVSDFVRHGAIAVKPDEPLWNALKAMVTHGIHGAAVMEDSKIVGAFEEDDLLRALRALEE DALAAEVKRFMKPAVVVKSSDTFQNAMVEMLKGNTTRAFVRSSGLLRSGVYGVISASDIVRVLTGDYRGFRAPGNTDRPV SPPKVGDIFWPGSVAIKQVIRNSPLTLDASSSVADVARCISEKGRHYAVLLEGESPIGRAGDKDVMGAALDAILNRRDLH DLTARNYLQEMVVVPPETPLHEALWEVIDKMSDRIYVMDGRKLTGVVPLIDAVYTLAKVASD
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32809; Mature: 32809
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREEVASSPQGLGLEILAKHKVSDFVRHGAIAVKPDEPLWNALKAMVTHGIHGAAVMEDS CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCCCCEEECCC KIVGAFEEDDLLRALRALEEDALAAEVKRFMKPAVVVKSSDTFQNAMVEMLKGNTTRAFV CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCHHHHH RSSGLLRSGVYGVISASDIVRVLTGDYRGFRAPGNTDRPVSPPKVGDIFWPGSVAIKQVI HHCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHH RNSPLTLDASSSVADVARCISEKGRHYAVLLEGESPIGRAGDKDVMGAALDAILNRRDLH CCCCCEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH DLTARNYLQEMVVVPPETPLHEALWEVIDKMSDRIYVMDGRKLTGVVPLIDAVYTLAKVA HHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHH SD CC >Mature Secondary Structure MREEVASSPQGLGLEILAKHKVSDFVRHGAIAVKPDEPLWNALKAMVTHGIHGAAVMEDS CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCCCCEEECCC KIVGAFEEDDLLRALRALEEDALAAEVKRFMKPAVVVKSSDTFQNAMVEMLKGNTTRAFV CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCHHHHH RSSGLLRSGVYGVISASDIVRVLTGDYRGFRAPGNTDRPVSPPKVGDIFWPGSVAIKQVI HHCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHH RNSPLTLDASSSVADVARCISEKGRHYAVLLEGESPIGRAGDKDVMGAALDAILNRRDLH CCCCCEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH DLTARNYLQEMVVVPPETPLHEALWEVIDKMSDRIYVMDGRKLTGVVPLIDAVYTLAKVA HHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHH SD CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA