| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20094000
Identifier: 20094000
GI number: 20094000
Start: 525271
End: 525885
Strand: Direct
Name: 20094000
Synonym: MK0562
Alternate gene names: NA
Gene position: 525271-525885 (Clockwise)
Preceding gene: 20093999
Following gene: 20094001
Centisome position: 30.99
GC content: 57.24
Gene sequence:
>615_bases TTGATCTTACGCCCGAGTACGCGACCCGCGGAGCGCGCACTCGACGCGCTCCTTGAAGAGCTAGACACCATGATTGAAGC CTGTGATCTGCTTTCCGACGTAACGACGATGGAGGAGAGTCCGAAGGAAGTCGAGGAGCGGCAAGAGTCCCTGAGCGAAG AAGTGGCCGAACTCAAGGACCGTGTAGACGAGGCTATGGAAAGCAGCTCCATGATCCCAGTCGTCAAGGAAGAGTTGGGC TACATAGCCGAGAACGTGAGGAGAGCCGCCGAGACGTTGCTGAGTTTGGCCTCCCTACTGGTGAGCTTCTACGAGGATTT GGAGGAGGAGGATCGCGAGAAGCTAGACGAAGTGATCGAAGGTATCGCCAAAATCGCCTCGGGAGTACGTGAATCGGTCG AGTTGTTGAACGAGGACGTACGGAAGGCGGCGGAGCACGTCGAAAAGATTCGGGACCAGGAAGAGGACGTTCGGTCCCGA CTACGCACGCTGATGCTCAAAACCGAGAGGAACGGGCGTCTAGCACCGATCGTCCTGGAAATCGAACGGGCGCTCGAAGA CATGGACCGAGCCCTTGACGGGGTGAACAGGATTAAAGTGAGGTTCCTCGGGTGA
Upstream 100 bases:
>100_bases AGAAGATATTTACAACGTGGATCGCGAGCCCTGTGGGCTCGTTCGTAATGTCGTACGCACTCATGCGTCTCTACTTGTCG GTGCGAGGGGCGGCGGTGCC
Downstream 100 bases:
>100_bases GACCGGTGGAGGTCCTAGGGAAGCGCTGGGCCCACCCGATCGCCTGCGCTTCCGGGGCTCTCGCCGCCCATCGGCCGGGC ATGGAAAATGCCGTTCTACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MILRPSTRPAERALDALLEELDTMIEACDLLSDVTTMEESPKEVEERQESLSEEVAELKDRVDEAMESSSMIPVVKEELG YIAENVRRAAETLLSLASLLVSFYEDLEEEDREKLDEVIEGIAKIASGVRESVELLNEDVRKAAEHVEKIRDQEEDVRSR LRTLMLKTERNGRLAPIVLEIERALEDMDRALDGVNRIKVRFLG
Sequences:
>Translated_204_residues MILRPSTRPAERALDALLEELDTMIEACDLLSDVTTMEESPKEVEERQESLSEEVAELKDRVDEAMESSSMIPVVKEELG YIAENVRRAAETLLSLASLLVSFYEDLEEEDREKLDEVIEGIAKIASGVRESVELLNEDVRKAAEHVEKIRDQEEDVRSR LRTLMLKTERNGRLAPIVLEIERALEDMDRALDGVNRIKVRFLG >Mature_204_residues MILRPSTRPAERALDALLEELDTMIEACDLLSDVTTMEESPKEVEERQESLSEEVAELKDRVDEAMESSSMIPVVKEELG YIAENVRRAAETLLSLASLLVSFYEDLEEEDREKLDEVIEGIAKIASGVRESVELLNEDVRKAAEHVEKIRDQEEDVRSR LRTLMLKTERNGRLAPIVLEIERALEDMDRALDGVNRIKVRFLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23240; Mature: 23240
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRPSTRPAERALDALLEELDTMIEACDLLSDVTTMEESPKEVEERQESLSEEVAELKD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH RVDEAMESSSMIPVVKEELGYIAENVRRAAETLLSLASLLVSFYEDLEEEDREKLDEVIE HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIAKIASGVRESVELLNEDVRKAAEHVEKIRDQEEDVRSRLRTLMLKTERNGRLAPIVLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHH IERALEDMDRALDGVNRIKVRFLG HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MILRPSTRPAERALDALLEELDTMIEACDLLSDVTTMEESPKEVEERQESLSEEVAELKD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH RVDEAMESSSMIPVVKEELGYIAENVRRAAETLLSLASLLVSFYEDLEEEDREKLDEVIE HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIAKIASGVRESVELLNEDVRKAAEHVEKIRDQEEDVRSRLRTLMLKTERNGRLAPIVLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHH IERALEDMDRALDGVNRIKVRFLG HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA