| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093996
Identifier: 20093996
GI number: 20093996
Start: 521047
End: 522033
Strand: Direct
Name: 20093996
Synonym: MK0558
Alternate gene names: NA
Gene position: 521047-522033 (Clockwise)
Preceding gene: 20093993
Following gene: 20093997
Centisome position: 30.74
GC content: 63.73
Gene sequence:
>987_bases TTGGTCCGGGTACGGTCCGTCTCCAGGATCCACGTGACACTGATCGACTTACACGGTGGGTTGGGCCGAGTAGACGGTAG CGTGGGAGTGACGCTGGAGGGCCCTAGGATCGAGCTCGAGGTGGAACCGACGGGGGAAGGGGTCAAGGTCGACGGAGAAG GAGAGATCGCGGAGAAAGCGGAGCGGGCGGCGCGGAAGGTACTCGATCTGTACGGGATCGAGGGTGGTGTCCGGATCGAG GTGGTGAGGCGGTATCCCGAGCACGTTGGCCTCGGTTCCGGTACGCAGGCGACGTTGTCAGCAGCTGTCGGAACGTTGGA GGCACACGGTGTCGAGCACTACGACGTGCGGGAACTGGCGGATGCACTGGGTCGAGGTGGGACATCGGGGATCGGTGTGG CGGCGTTCGAGCGGGGCGGGTTCATAGTAGATGGTGGCCACGTCTTCGGCCCGGGTGGGAAAGAGGAGTTCAAACCGTCG GCGGCGTCTGGCGAGGTCCCTCCGGCACCGGTGATCTCGCGGCTGGAAGTACCGGAGGATTGGCGGTTCGTGCTCGCGAT CCCAGAGGTGGAACGGGGTGCGCACGGGGATAAGGAAGTGAACATCTTCAAGCGGTACTGCCCGGTACCGGCGCGGGAGG TGGGGGAGATCTGCAGGTGGATACTGATGGTGATGATGCCCGCGGTGGTGGAAGACGACCCTGAGGATTTCGGCAGGGCG GTGGACGCTATTCAGGACTTAGGGTTCAAGCGTGTGGAGGTGGGTCTACAGCATCCCGTGGTCAGGGAGATGATGGAGGT GGCCCGGAGTGCCGGAGCTTACGGGGCCGGGTTGAGCTCGTTCGGTCCTACCGTGTACGCGGTGTGCGATTCGCCCTCGG CGCGTGACGTCGCGCAGGAGCTTGAAATGTATATGAGAGAGGAGGGTATCGGCGGGGAGGTAAGCGTTTCCGAACCGCGG AACGAGGGTTTCGAGGTGACGGGGTAG
Upstream 100 bases:
>100_bases AAGACAGGTCGAGCCGCACCCGCGAACCGTCGTGATGATCGCGACGTTGTGACGGGATCGTTATACCGCCGCGCGACGGT CTGGCGATCGGGGGTCGTTC
Downstream 100 bases:
>100_bases GGGGGTCACCTTTGGGGGTGTACGTGGCCGAGAACTTCACCGGAGTTTACGCGTTCGATGAGGAGGGGAACCTGATAGAC CACGAGCCGTTCCCGAAGGA
Product: specific sugar kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MVRVRSVSRIHVTLIDLHGGLGRVDGSVGVTLEGPRIELEVEPTGEGVKVDGEGEIAEKAERAARKVLDLYGIEGGVRIE VVRRYPEHVGLGSGTQATLSAAVGTLEAHGVEHYDVRELADALGRGGTSGIGVAAFERGGFIVDGGHVFGPGGKEEFKPS AASGEVPPAPVISRLEVPEDWRFVLAIPEVERGAHGDKEVNIFKRYCPVPAREVGEICRWILMVMMPAVVEDDPEDFGRA VDAIQDLGFKRVEVGLQHPVVREMMEVARSAGAYGAGLSSFGPTVYAVCDSPSARDVAQELEMYMREEGIGGEVSVSEPR NEGFEVTG
Sequences:
>Translated_328_residues MVRVRSVSRIHVTLIDLHGGLGRVDGSVGVTLEGPRIELEVEPTGEGVKVDGEGEIAEKAERAARKVLDLYGIEGGVRIE VVRRYPEHVGLGSGTQATLSAAVGTLEAHGVEHYDVRELADALGRGGTSGIGVAAFERGGFIVDGGHVFGPGGKEEFKPS AASGEVPPAPVISRLEVPEDWRFVLAIPEVERGAHGDKEVNIFKRYCPVPAREVGEICRWILMVMMPAVVEDDPEDFGRA VDAIQDLGFKRVEVGLQHPVVREMMEVARSAGAYGAGLSSFGPTVYAVCDSPSARDVAQELEMYMREEGIGGEVSVSEPR NEGFEVTG >Mature_328_residues MVRVRSVSRIHVTLIDLHGGLGRVDGSVGVTLEGPRIELEVEPTGEGVKVDGEGEIAEKAERAARKVLDLYGIEGGVRIE VVRRYPEHVGLGSGTQATLSAAVGTLEAHGVEHYDVRELADALGRGGTSGIGVAAFERGGFIVDGGHVFGPGGKEEFKPS AASGEVPPAPVISRLEVPEDWRFVLAIPEVERGAHGDKEVNIFKRYCPVPAREVGEICRWILMVMMPAVVEDDPEDFGRA VDAIQDLGFKRVEVGLQHPVVREMMEVARSAGAYGAGLSSFGPTVYAVCDSPSARDVAQELEMYMREEGIGGEVSVSEPR NEGFEVTG
Specific function: Unknown
COG id: COG1907
COG function: function code R; Predicted archaeal sugar kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1427 and M.thermoautotrophicum MTH830 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004422 - InterPro: IPR006204 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF00288 GHMP_kinases_N [H]
EC number: NA
Molecular weight: Translated: 35040; Mature: 35040
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRVRSVSRIHVTLIDLHGGLGRVDGSVGVTLEGPRIELEVEPTGEGVKVDGEGEIAEKA CCEECCCCEEEEEEEEECCCCCCCCCCEEEEEECCEEEEEECCCCCCEEECCCCCHHHHH ERAARKVLDLYGIEGGVRIEVVRRYPEHVGLGSGTQATLSAAVGTLEAHGVEHYDVRELA HHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH DALGRGGTSGIGVAAFERGGFIVDGGHVFGPGGKEEFKPSAASGEVPPAPVISRLEVPED HHHCCCCCCCCEEEEEECCCEEEECCEEECCCCHHHCCCCCCCCCCCCCHHHHHCCCCCC WRFVLAIPEVERGAHGDKEVNIFKRYCPVPAREVGEICRWILMVMMPAVVEDDPEDFGRA CEEEEECCCHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH VDAIQDLGFKRVEVGLQHPVVREMMEVARSAGAYGAGLSSFGPTVYAVCDSPSARDVAQE HHHHHHCCCCEEHHCCCCHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEECCCCHHHHHHH LEMYMREEGIGGEVSVSEPRNEGFEVTG HHHHHHHCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure MVRVRSVSRIHVTLIDLHGGLGRVDGSVGVTLEGPRIELEVEPTGEGVKVDGEGEIAEKA CCEECCCCEEEEEEEEECCCCCCCCCCEEEEEECCEEEEEECCCCCCEEECCCCCHHHHH ERAARKVLDLYGIEGGVRIEVVRRYPEHVGLGSGTQATLSAAVGTLEAHGVEHYDVRELA HHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH DALGRGGTSGIGVAAFERGGFIVDGGHVFGPGGKEEFKPSAASGEVPPAPVISRLEVPED HHHCCCCCCCCEEEEEECCCEEEECCEEECCCCHHHCCCCCCCCCCCCCHHHHHCCCCCC WRFVLAIPEVERGAHGDKEVNIFKRYCPVPAREVGEICRWILMVMMPAVVEDDPEDFGRA CEEEEECCCHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH VDAIQDLGFKRVEVGLQHPVVREMMEVARSAGAYGAGLSSFGPTVYAVCDSPSARDVAQE HHHHHHCCCCEEHHCCCCHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEECCCCHHHHHHH LEMYMREEGIGGEVSVSEPRNEGFEVTG HHHHHHHCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]