Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20093996

Identifier: 20093996

GI number: 20093996

Start: 521047

End: 522033

Strand: Direct

Name: 20093996

Synonym: MK0558

Alternate gene names: NA

Gene position: 521047-522033 (Clockwise)

Preceding gene: 20093993

Following gene: 20093997

Centisome position: 30.74

GC content: 63.73

Gene sequence:

>987_bases
TTGGTCCGGGTACGGTCCGTCTCCAGGATCCACGTGACACTGATCGACTTACACGGTGGGTTGGGCCGAGTAGACGGTAG
CGTGGGAGTGACGCTGGAGGGCCCTAGGATCGAGCTCGAGGTGGAACCGACGGGGGAAGGGGTCAAGGTCGACGGAGAAG
GAGAGATCGCGGAGAAAGCGGAGCGGGCGGCGCGGAAGGTACTCGATCTGTACGGGATCGAGGGTGGTGTCCGGATCGAG
GTGGTGAGGCGGTATCCCGAGCACGTTGGCCTCGGTTCCGGTACGCAGGCGACGTTGTCAGCAGCTGTCGGAACGTTGGA
GGCACACGGTGTCGAGCACTACGACGTGCGGGAACTGGCGGATGCACTGGGTCGAGGTGGGACATCGGGGATCGGTGTGG
CGGCGTTCGAGCGGGGCGGGTTCATAGTAGATGGTGGCCACGTCTTCGGCCCGGGTGGGAAAGAGGAGTTCAAACCGTCG
GCGGCGTCTGGCGAGGTCCCTCCGGCACCGGTGATCTCGCGGCTGGAAGTACCGGAGGATTGGCGGTTCGTGCTCGCGAT
CCCAGAGGTGGAACGGGGTGCGCACGGGGATAAGGAAGTGAACATCTTCAAGCGGTACTGCCCGGTACCGGCGCGGGAGG
TGGGGGAGATCTGCAGGTGGATACTGATGGTGATGATGCCCGCGGTGGTGGAAGACGACCCTGAGGATTTCGGCAGGGCG
GTGGACGCTATTCAGGACTTAGGGTTCAAGCGTGTGGAGGTGGGTCTACAGCATCCCGTGGTCAGGGAGATGATGGAGGT
GGCCCGGAGTGCCGGAGCTTACGGGGCCGGGTTGAGCTCGTTCGGTCCTACCGTGTACGCGGTGTGCGATTCGCCCTCGG
CGCGTGACGTCGCGCAGGAGCTTGAAATGTATATGAGAGAGGAGGGTATCGGCGGGGAGGTAAGCGTTTCCGAACCGCGG
AACGAGGGTTTCGAGGTGACGGGGTAG

Upstream 100 bases:

>100_bases
AAGACAGGTCGAGCCGCACCCGCGAACCGTCGTGATGATCGCGACGTTGTGACGGGATCGTTATACCGCCGCGCGACGGT
CTGGCGATCGGGGGTCGTTC

Downstream 100 bases:

>100_bases
GGGGGTCACCTTTGGGGGTGTACGTGGCCGAGAACTTCACCGGAGTTTACGCGTTCGATGAGGAGGGGAACCTGATAGAC
CACGAGCCGTTCCCGAAGGA

Product: specific sugar kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MVRVRSVSRIHVTLIDLHGGLGRVDGSVGVTLEGPRIELEVEPTGEGVKVDGEGEIAEKAERAARKVLDLYGIEGGVRIE
VVRRYPEHVGLGSGTQATLSAAVGTLEAHGVEHYDVRELADALGRGGTSGIGVAAFERGGFIVDGGHVFGPGGKEEFKPS
AASGEVPPAPVISRLEVPEDWRFVLAIPEVERGAHGDKEVNIFKRYCPVPAREVGEICRWILMVMMPAVVEDDPEDFGRA
VDAIQDLGFKRVEVGLQHPVVREMMEVARSAGAYGAGLSSFGPTVYAVCDSPSARDVAQELEMYMREEGIGGEVSVSEPR
NEGFEVTG

Sequences:

>Translated_328_residues
MVRVRSVSRIHVTLIDLHGGLGRVDGSVGVTLEGPRIELEVEPTGEGVKVDGEGEIAEKAERAARKVLDLYGIEGGVRIE
VVRRYPEHVGLGSGTQATLSAAVGTLEAHGVEHYDVRELADALGRGGTSGIGVAAFERGGFIVDGGHVFGPGGKEEFKPS
AASGEVPPAPVISRLEVPEDWRFVLAIPEVERGAHGDKEVNIFKRYCPVPAREVGEICRWILMVMMPAVVEDDPEDFGRA
VDAIQDLGFKRVEVGLQHPVVREMMEVARSAGAYGAGLSSFGPTVYAVCDSPSARDVAQELEMYMREEGIGGEVSVSEPR
NEGFEVTG
>Mature_328_residues
MVRVRSVSRIHVTLIDLHGGLGRVDGSVGVTLEGPRIELEVEPTGEGVKVDGEGEIAEKAERAARKVLDLYGIEGGVRIE
VVRRYPEHVGLGSGTQATLSAAVGTLEAHGVEHYDVRELADALGRGGTSGIGVAAFERGGFIVDGGHVFGPGGKEEFKPS
AASGEVPPAPVISRLEVPEDWRFVLAIPEVERGAHGDKEVNIFKRYCPVPAREVGEICRWILMVMMPAVVEDDPEDFGRA
VDAIQDLGFKRVEVGLQHPVVREMMEVARSAGAYGAGLSSFGPTVYAVCDSPSARDVAQELEMYMREEGIGGEVSVSEPR
NEGFEVTG

Specific function: Unknown

COG id: COG1907

COG function: function code R; Predicted archaeal sugar kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1427 and M.thermoautotrophicum MTH830 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004422
- InterPro:   IPR006204
- InterPro:   IPR020568
- InterPro:   IPR014721 [H]

Pfam domain/function: PF00288 GHMP_kinases_N [H]

EC number: NA

Molecular weight: Translated: 35040; Mature: 35040

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRVRSVSRIHVTLIDLHGGLGRVDGSVGVTLEGPRIELEVEPTGEGVKVDGEGEIAEKA
CCEECCCCEEEEEEEEECCCCCCCCCCEEEEEECCEEEEEECCCCCCEEECCCCCHHHHH
ERAARKVLDLYGIEGGVRIEVVRRYPEHVGLGSGTQATLSAAVGTLEAHGVEHYDVRELA
HHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH
DALGRGGTSGIGVAAFERGGFIVDGGHVFGPGGKEEFKPSAASGEVPPAPVISRLEVPED
HHHCCCCCCCCEEEEEECCCEEEECCEEECCCCHHHCCCCCCCCCCCCCHHHHHCCCCCC
WRFVLAIPEVERGAHGDKEVNIFKRYCPVPAREVGEICRWILMVMMPAVVEDDPEDFGRA
CEEEEECCCHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VDAIQDLGFKRVEVGLQHPVVREMMEVARSAGAYGAGLSSFGPTVYAVCDSPSARDVAQE
HHHHHHCCCCEEHHCCCCHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEECCCCHHHHHHH
LEMYMREEGIGGEVSVSEPRNEGFEVTG
HHHHHHHCCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MVRVRSVSRIHVTLIDLHGGLGRVDGSVGVTLEGPRIELEVEPTGEGVKVDGEGEIAEKA
CCEECCCCEEEEEEEEECCCCCCCCCCEEEEEECCEEEEEECCCCCCEEECCCCCHHHHH
ERAARKVLDLYGIEGGVRIEVVRRYPEHVGLGSGTQATLSAAVGTLEAHGVEHYDVRELA
HHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH
DALGRGGTSGIGVAAFERGGFIVDGGHVFGPGGKEEFKPSAASGEVPPAPVISRLEVPED
HHHCCCCCCCCEEEEEECCCEEEECCEEECCCCHHHCCCCCCCCCCCCCHHHHHCCCCCC
WRFVLAIPEVERGAHGDKEVNIFKRYCPVPAREVGEICRWILMVMMPAVVEDDPEDFGRA
CEEEEECCCHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VDAIQDLGFKRVEVGLQHPVVREMMEVARSAGAYGAGLSSFGPTVYAVCDSPSARDVAQE
HHHHHHCCCCEEHHCCCCHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEECCCCHHHHHHH
LEMYMREEGIGGEVSVSEPRNEGFEVTG
HHHHHHHCCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]