| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is IlvB_2 [H]
Identifier: 20093969
GI number: 20093969
Start: 495059
End: 496756
Strand: Direct
Name: IlvB_2 [H]
Synonym: MK0531
Alternate gene names: 20093969
Gene position: 495059-496756 (Clockwise)
Preceding gene: 20093968
Following gene: 20093970
Centisome position: 29.21
GC content: 58.6
Gene sequence:
>1698_bases GTGAGTGAGTTGCCCACGGGTGCCAGGGTACTCGTCGAGTGCTTGAAAGAAGAGGGCGTCGAGCACATTTTCGGGTACCC GGGAGGTGCCGTCCTACCGATTTATGACGAGATCTACGACGAGGTTTCGATCGAACACATCCTCGTACGACACGAGCAGG GAGCTGCCCACGCCGCCGACGGGTACGCGAGGGTGAAAGGGAAACCCGGAGTCTGCATGGCGACATCGGGACCCGGAGCG ACGAACCTAGTCACGGGTATCGCCACGGCTTACATGGACTCGTCCCCGGTAATAGCCATCACCGGACAGGTCCCCACCAC CATGATCGGGAAGGACGCGTTCCAGGAGGTCGACGCCGTCGGCGTGTTCATGCCCATCACTAAGCATAACTACCAGATAG GGAAACCCGAGGAGATACCGGAAGTCGTGAAGGAGGCGTTCAAGATAGCTATCACCGGTCGGCCGGGGCCTGTTCACATC GACGTGCCCAAAGACGTGCAGGAAGCGGAAGTGGATGTCGAGATACCCAAAACCGTCGAGGTCGAGGGCTTGAACGTGGT CAAGCGCGGTCATCCGGTACAGATCAAACGGGCCGCGGAGTTACTCGCCGAGGCGGAGCGACCCGTCATCTTAGCAGGCG GTGGGTGTGTAATCTCCAACGCTACTCGGGAGCTGATCGAGCTCGCGGAACTGCTCGGTGCTCCGGTAGCTACGACCCTC ATGGGGAAGGGAGCGTTTCCCGAGGATCATCCACTAGCACTGGGTATGGCCGGTATGCACGGCACTAAGGCCGCGAACTA CGCGCTGACGGAGTGCGACGTGCTACTCGCTGTAGGGTGCAGGTTCTCGGACAGGACTACGGGGGATCCCTCCGGATTCG CTCCCGAAGCGAAGATCATCCATATTGACATAGACCCCGCCGAGATCGGCAAGAACATCCCAGTCGACGTGCCCATAGTT GGTGATGCGAAGCTCGTCCTCAGGGACCTGATTAAGGAGTTGAAGCGGCGTAAGTACCTGAGGGAACGTAAGCGCTGGGG AGAGAGGATCGAGGAACTGAAGGCTGAAGTAGAGATGCCTCCGGAATCCACGGAGTCCGACCAACGGATCAGCCCGCGTG AGCTCGTACGTGTGTTACACGAAGCCCTGAAAGATCGGGATTACATTCTCACTACGGACGTAGGTCAGAACCAGATGTGG ATGGCCCGATACTTCCCGGTGGAAGAACCGCGCAGGTTCATCTCCTCCGGTGGTTTAGGAACCATGGGATTCGGTCTTCC GGCCGCGCTCGGCGCTAAGGTAGCCGCACCGGAGAAAACCGTGGTCGCCGTGGTAGGAGACGGTGGGTTCTTGATGACCG CGCAAGAGTTAGCCACCGCCGTGGACAACGACATCGAGGTGAAGGTCTTCGTCATGGATAATAGACTCTTAGGGATGGTA GCGCAGTGGCAGAGGCTGTTCTACGACGAAAGATTGTCGGAATCGAAACTCGATGAGAAAACCGACATAGTGAAACTGAC GGAGTCGTACGGAGCAGCCGGAATTACCGTGGAGGAGCCGAGCGAGCTGGAGTCCGCGGTAGAGGAAGCCTTCGAGACTC CGGGTACGGTGGTGGTGGATGTGTTCGTAGATCCGGAAGAAATCATCCCGATGGTGCCGCCGGGAGGCGAGTTGCGCGAC ATCCTTGGTGAAAAATGA
Upstream 100 bases:
>100_bases GGTATGCGGATGTTCGGAGAGCCCGTCAAGTTGATCGACGGGACCAAGGTGTACGACCTCAAGGAATCTCGGCGGGAGGG GAAGCCGGTCATACTGGAGG
Downstream 100 bases:
>100_bases GGCGGAAGTGAAAAAAGGATGGAGGGGGCCTACCCCTCGGCCCCGACCTCTACCACACGCGGCACCAACATCGCTGTGCA CATTTCAGGCATTTCGAGAG
Product: acetolactate synthase catalytic subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MSELPTGARVLVECLKEEGVEHIFGYPGGAVLPIYDEIYDEVSIEHILVRHEQGAAHAADGYARVKGKPGVCMATSGPGA TNLVTGIATAYMDSSPVIAITGQVPTTMIGKDAFQEVDAVGVFMPITKHNYQIGKPEEIPEVVKEAFKIAITGRPGPVHI DVPKDVQEAEVDVEIPKTVEVEGLNVVKRGHPVQIKRAAELLAEAERPVILAGGGCVISNATRELIELAELLGAPVATTL MGKGAFPEDHPLALGMAGMHGTKAANYALTECDVLLAVGCRFSDRTTGDPSGFAPEAKIIHIDIDPAEIGKNIPVDVPIV GDAKLVLRDLIKELKRRKYLRERKRWGERIEELKAEVEMPPESTESDQRISPRELVRVLHEALKDRDYILTTDVGQNQMW MARYFPVEEPRRFISSGGLGTMGFGLPAALGAKVAAPEKTVVAVVGDGGFLMTAQELATAVDNDIEVKVFVMDNRLLGMV AQWQRLFYDERLSESKLDEKTDIVKLTESYGAAGITVEEPSELESAVEEAFETPGTVVVDVFVDPEEIIPMVPPGGELRD ILGEK
Sequences:
>Translated_565_residues MSELPTGARVLVECLKEEGVEHIFGYPGGAVLPIYDEIYDEVSIEHILVRHEQGAAHAADGYARVKGKPGVCMATSGPGA TNLVTGIATAYMDSSPVIAITGQVPTTMIGKDAFQEVDAVGVFMPITKHNYQIGKPEEIPEVVKEAFKIAITGRPGPVHI DVPKDVQEAEVDVEIPKTVEVEGLNVVKRGHPVQIKRAAELLAEAERPVILAGGGCVISNATRELIELAELLGAPVATTL MGKGAFPEDHPLALGMAGMHGTKAANYALTECDVLLAVGCRFSDRTTGDPSGFAPEAKIIHIDIDPAEIGKNIPVDVPIV GDAKLVLRDLIKELKRRKYLRERKRWGERIEELKAEVEMPPESTESDQRISPRELVRVLHEALKDRDYILTTDVGQNQMW MARYFPVEEPRRFISSGGLGTMGFGLPAALGAKVAAPEKTVVAVVGDGGFLMTAQELATAVDNDIEVKVFVMDNRLLGMV AQWQRLFYDERLSESKLDEKTDIVKLTESYGAAGITVEEPSELESAVEEAFETPGTVVVDVFVDPEEIIPMVPPGGELRD ILGEK >Mature_564_residues SELPTGARVLVECLKEEGVEHIFGYPGGAVLPIYDEIYDEVSIEHILVRHEQGAAHAADGYARVKGKPGVCMATSGPGAT NLVTGIATAYMDSSPVIAITGQVPTTMIGKDAFQEVDAVGVFMPITKHNYQIGKPEEIPEVVKEAFKIAITGRPGPVHID VPKDVQEAEVDVEIPKTVEVEGLNVVKRGHPVQIKRAAELLAEAERPVILAGGGCVISNATRELIELAELLGAPVATTLM GKGAFPEDHPLALGMAGMHGTKAANYALTECDVLLAVGCRFSDRTTGDPSGFAPEAKIIHIDIDPAEIGKNIPVDVPIVG DAKLVLRDLIKELKRRKYLRERKRWGERIEELKAEVEMPPESTESDQRISPRELVRVLHEALKDRDYILTTDVGQNQMWM ARYFPVEEPRRFISSGGLGTMGFGLPAALGAKVAAPEKTVVAVVGDGGFLMTAQELATAVDNDIEVKVFVMDNRLLGMVA QWQRLFYDERLSESKLDEKTDIVKLTESYGAAGITVEEPSELESAVEEAFETPGTVVVDVFVDPEEIIPMVPPGGELRDI LGEK
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=564, Percent_Identity=27.3049645390071, Blast_Score=203, Evalue=4e-52, Organism=Homo sapiens, GI21361361, Length=504, Percent_Identity=26.5873015873016, Blast_Score=154, Evalue=2e-37, Organism=Escherichia coli, GI87081685, Length=572, Percent_Identity=46.3286713286713, Blast_Score=520, Evalue=1e-149, Organism=Escherichia coli, GI1790104, Length=562, Percent_Identity=44.1281138790036, Blast_Score=471, Evalue=1e-134, Organism=Escherichia coli, GI1786717, Length=570, Percent_Identity=35.0877192982456, Blast_Score=313, Evalue=3e-86, Organism=Escherichia coli, GI1787096, Length=557, Percent_Identity=31.2387791741472, Blast_Score=244, Evalue=1e-65, Organism=Escherichia coli, GI1788716, Length=558, Percent_Identity=27.0609318996416, Blast_Score=195, Evalue=7e-51, Organism=Caenorhabditis elegans, GI17531301, Length=559, Percent_Identity=27.906976744186, Blast_Score=172, Evalue=4e-43, Organism=Caenorhabditis elegans, GI17531299, Length=559, Percent_Identity=27.906976744186, Blast_Score=172, Evalue=4e-43, Organism=Caenorhabditis elegans, GI17542570, Length=569, Percent_Identity=27.2407732864675, Blast_Score=159, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6323755, Length=578, Percent_Identity=40.8304498269896, Blast_Score=424, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6320816, Length=564, Percent_Identity=27.3049645390071, Blast_Score=163, Evalue=8e-41, Organism=Saccharomyces cerevisiae, GI6321524, Length=514, Percent_Identity=26.8482490272374, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6323073, Length=510, Percent_Identity=26.2745098039216, Blast_Score=111, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6323163, Length=514, Percent_Identity=25.6809338521401, Blast_Score=110, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6320123, Length=497, Percent_Identity=23.5412474849095, Blast_Score=94, Evalue=6e-20, Organism=Drosophila melanogaster, GI19922626, Length=563, Percent_Identity=26.4653641207815, Blast_Score=181, Evalue=9e-46,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 61206; Mature: 61075
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELPTGARVLVECLKEEGVEHIFGYPGGAVLPIYDEIYDEVSIEHILVRHEQGAAHAAD CCCCCCHHHHHHHHHHHCCCCEECCCCCCCEEEHHHHHHHHHCHHHHEEECCCCCCCCCC GYARVKGKPGVCMATSGPGATNLVTGIATAYMDSSPVIAITGQVPTTMIGKDAFQEVDAV CEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCHHHHHHHHHC GVFMPITKHNYQIGKPEEIPEVVKEAFKIAITGRPGPVHIDVPKDVQEAEVDVEIPKTVE EEEEEEECCCCCCCCCHHHHHHHHHHHEEEEECCCCEEEEECCCCHHHCEEEEECCCEEE VEGLNVVKRGHPVQIKRAAELLAEAERPVILAGGGCVISNATRELIELAELLGAPVATTL ECCCCEEECCCCEEHHHHHHHHHHCCCCEEEECCCEEECHHHHHHHHHHHHHCCCHHHHH MGKGAFPEDHPLALGMAGMHGTKAANYALTECDVLLAVGCRFSDRTTGDPSGFAPEAKII HCCCCCCCCCCEEEEECCCCCCCCCCEEHHHHHEEEEECCCCCCCCCCCCCCCCCCCEEE HIDIDPAEIGKNIPVDVPIVGDAKLVLRDLIKELKRRKYLRERKRWGERIEELKAEVEMP EEECCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PESTESDQRISPRELVRVLHEALKDRDYILTTDVGQNQMWMARYFPVEEPRRFISSGGLG CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHCCCCC TMGFGLPAALGAKVAAPEKTVVAVVGDGGFLMTAQELATAVDNDIEVKVFVMDNRLLGMV CCCCCCHHHHCCCCCCCCCEEEEEEECCCEEEEHHHHHHHHCCCCEEEEEEECCHHHHHH AQWQRLFYDERLSESKLDEKTDIVKLTESYGAAGITVEEPSELESAVEEAFETPGTVVVD HHHHHHHHHHHHHHHHCCCHHHHEEEHHHCCCCCEEECCHHHHHHHHHHHHCCCCCEEEE VFVDPEEIIPMVPPGGELRDILGEK EEECHHHCCCCCCCCCHHHHHCCCC >Mature Secondary Structure SELPTGARVLVECLKEEGVEHIFGYPGGAVLPIYDEIYDEVSIEHILVRHEQGAAHAAD CCCCCHHHHHHHHHHHCCCCEECCCCCCCEEEHHHHHHHHHCHHHHEEECCCCCCCCCC GYARVKGKPGVCMATSGPGATNLVTGIATAYMDSSPVIAITGQVPTTMIGKDAFQEVDAV CEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCHHHHHHHHHC GVFMPITKHNYQIGKPEEIPEVVKEAFKIAITGRPGPVHIDVPKDVQEAEVDVEIPKTVE EEEEEEECCCCCCCCCHHHHHHHHHHHEEEEECCCCEEEEECCCCHHHCEEEEECCCEEE VEGLNVVKRGHPVQIKRAAELLAEAERPVILAGGGCVISNATRELIELAELLGAPVATTL ECCCCEEECCCCEEHHHHHHHHHHCCCCEEEECCCEEECHHHHHHHHHHHHHCCCHHHHH MGKGAFPEDHPLALGMAGMHGTKAANYALTECDVLLAVGCRFSDRTTGDPSGFAPEAKII HCCCCCCCCCCEEEEECCCCCCCCCCEEHHHHHEEEEECCCCCCCCCCCCCCCCCCCEEE HIDIDPAEIGKNIPVDVPIVGDAKLVLRDLIKELKRRKYLRERKRWGERIEELKAEVEMP EEECCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PESTESDQRISPRELVRVLHEALKDRDYILTTDVGQNQMWMARYFPVEEPRRFISSGGLG CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHCCCCC TMGFGLPAALGAKVAAPEKTVVAVVGDGGFLMTAQELATAVDNDIEVKVFVMDNRLLGMV CCCCCCHHHHCCCCCCCCCEEEEEEECCCEEEEHHHHHHHHCCCCEEEEEEECCHHHHHH AQWQRLFYDERLSESKLDEKTDIVKLTESYGAAGITVEEPSELESAVEEAFETPGTVVVD HHHHHHHHHHHHHHHHCCCHHHHEEEHHHCCCCCEEECCHHHHHHHHHHHHCCCCCEEEE VFVDPEEIIPMVPPGGELRDILGEK EEECHHHCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]