| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is metN [H]
Identifier: 20093958
GI number: 20093958
Start: 483880
End: 485811
Strand: Direct
Name: metN [H]
Synonym: MK0520
Alternate gene names: 20093958
Gene position: 483880-485811 (Clockwise)
Preceding gene: 20093949
Following gene: 20093960
Centisome position: 28.55
GC content: 58.28
Gene sequence:
>1932_bases TTGCTCGAGGGTATGGTCGTGAACGAGTTTCGGGAGCGAAGGACTAACTACTGGGACGGGGAGGTCGAGATCGAAACGGA GGACGGAAAACTCAAGCTTCGGATGCCCGGAACTATAGCAGGTTGGCTCACGAAGGGTACCAGGGTCAGGGTGCACGGCG CCGACGGGGTGCAGTCCGTCGACGTATTTAAAGATGATGTGGAGGTGGAGCGGAGGTACGAGGACGAGTGGGTGCCGGTG TGGCCACCGTTCGAGATGGAGACCGAAGTAGAGAAGCGGGATACGCTCGGTCGTGGTGTTTACGAGTACAGATTGCGGGC CAGGGAGGCCATCTACCGGGAAGACTTCGAAGCTATCGTGGGCCTCGAACAGTACCATTACGCCTCCGATAAAGACGTGG TGGCAGTGTGGGGATGTAATGAGTGTGGACGCTCGATACGGGCCAACCTCAAGCCGGAAGAGTGCCCCGGATGCGGCTCG TCGCGGATCGAACTTCGAACGATCAGAGGCTCGTTACCCGCTTCCAGGTTCATGGTAGTGGAGCTGCTGAACGGCGAGGA GTACGAGCCGGATGTCCTGGCATACGTCCGTGTGGATCCGCCCATCCCTAAACTCAACCGACGTCTCGACGGTAAAGTGG AGCGAAACATCAGGGAGAAAGTCTTCGGCAAGGACTGGTTCCACCCTACCTTCGAGCCCAAGCGAGGTAAGACCATTGAG GACATCCTAAGTGCCTGCGACACCAAAGCGGCTCGCATAGCTCGGGTCGTGGTTCATCCAGAGTACCGGGCCGACGGTAT TGGGAGAGCCTCGGTGCAAGCCGCTGTACGATGGGTGAAAGAGCGTCGAATCCCGGAAATGAAGTCGGAAAAACACCTGA TCGAAGTTATCGCCCAAATGGCCAGGTACCATCCGATCTTCGAGAGCGTCGGGTTCGTATACCTATGGGATACCGGCTCC GGCCGACCTTACCTCGTACGTCCGCTGTCGGAAGATGCCAAGAGGAAGGTTTCGAGGTTCATCAAAACCGACAAGATAGC GAGACAGCACGGCGGCCGACTGTACAGATCCAGGTTGCGAAAACTCGAGGTAGAGCCCCTCGACGGACCGATCAAGGTGA AGCGACTCCACAAGATGTTCTCCACGGAGCTCGACGTGAAAGGGTTGCCCAAGGACGTCGTTAAGCTTCTCGAGGCGTTC GGGGTCCTTCATCGGAAGATTCAGCAGTACGCGCTTCAGGACGTGAACCTACGGATCGAGCCCGGCGAACTCGTCGTGGT GGTCGGCCCCAGCGGAGCCGGAAAGACGACGTTAGTCCGCATGATTATGGGCGCACACGAAGAATTCATCGAGAATGTCC GCCGGCGCATCATCCGCGAGCTTTCGACGCCGGTAGTGTCCCGAGCACTGTCTTCCATGGGTACGAACCCTAAAGAGGTC GCGGATAAGCTGGTCAAGGAGATGTACCAGCCCGACAAGGGGAAAGTTTCCCTACCTGAGAACACCGAACTGTCCGCGAT GATCCCGGGGGAAGTGGAACCCGAGATCGACCCCGGTGTGACCATCATCGAAGACCTGTGGTCGGTGACCGGGGACGTGA ACGTCGCGGTGGAGATACTCAACCGGTCCGGTATCTCGGATGCCGTGCTGTACCGGAGCCCGTACGAGCGGTTGTCTCCG GGTCAGAAGGAGCGAGTTCGCCTGGCCAGGATGATCGCGGAGGGGGCTAACCTGATAGTAGTCGACGAGTTTTGCTCGCA CCTGGATCCGAAGACCGCCATGCGCGTGGCCCGAAGCTTTTCGGAAATGTGCAGGGAGTTAGAGATCACCGCGCTGATTA TCACGCACAGAGCCGAGGTCATCGATGCGCTAGCGCCGGATAAACTGGTGTACGTCGGGTATGGGTTGGTTGGGGTGGAG GAGAAGAGTTAG
Upstream 100 bases:
>100_bases GTTTTTCATGACACGGGCTACGTGACCGATGTTCCCGTCGTACTTCGGTTCTACCAGTACCACCCGCACGTCCAAGCTGG ATTCCTCCGGGGTGCAGTCT
Downstream 100 bases:
>100_bases CCTTCTTCACCCTCTCCCTCACCTTCAGGCGGTATCGCCAGTACCGGGCAGGGTGACCTTGATAGTACACCCTTGGTCGT ACTGCCCAGGATGAGACCCT
Product: ABC transporter ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 643; Mature: 643
Protein sequence:
>643_residues MLEGMVVNEFRERRTNYWDGEVEIETEDGKLKLRMPGTIAGWLTKGTRVRVHGADGVQSVDVFKDDVEVERRYEDEWVPV WPPFEMETEVEKRDTLGRGVYEYRLRAREAIYREDFEAIVGLEQYHYASDKDVVAVWGCNECGRSIRANLKPEECPGCGS SRIELRTIRGSLPASRFMVVELLNGEEYEPDVLAYVRVDPPIPKLNRRLDGKVERNIREKVFGKDWFHPTFEPKRGKTIE DILSACDTKAARIARVVVHPEYRADGIGRASVQAAVRWVKERRIPEMKSEKHLIEVIAQMARYHPIFESVGFVYLWDTGS GRPYLVRPLSEDAKRKVSRFIKTDKIARQHGGRLYRSRLRKLEVEPLDGPIKVKRLHKMFSTELDVKGLPKDVVKLLEAF GVLHRKIQQYALQDVNLRIEPGELVVVVGPSGAGKTTLVRMIMGAHEEFIENVRRRIIRELSTPVVSRALSSMGTNPKEV ADKLVKEMYQPDKGKVSLPENTELSAMIPGEVEPEIDPGVTIIEDLWSVTGDVNVAVEILNRSGISDAVLYRSPYERLSP GQKERVRLARMIAEGANLIVVDEFCSHLDPKTAMRVARSFSEMCRELEITALIITHRAEVIDALAPDKLVYVGYGLVGVE EKS
Sequences:
>Translated_643_residues MLEGMVVNEFRERRTNYWDGEVEIETEDGKLKLRMPGTIAGWLTKGTRVRVHGADGVQSVDVFKDDVEVERRYEDEWVPV WPPFEMETEVEKRDTLGRGVYEYRLRAREAIYREDFEAIVGLEQYHYASDKDVVAVWGCNECGRSIRANLKPEECPGCGS SRIELRTIRGSLPASRFMVVELLNGEEYEPDVLAYVRVDPPIPKLNRRLDGKVERNIREKVFGKDWFHPTFEPKRGKTIE DILSACDTKAARIARVVVHPEYRADGIGRASVQAAVRWVKERRIPEMKSEKHLIEVIAQMARYHPIFESVGFVYLWDTGS GRPYLVRPLSEDAKRKVSRFIKTDKIARQHGGRLYRSRLRKLEVEPLDGPIKVKRLHKMFSTELDVKGLPKDVVKLLEAF GVLHRKIQQYALQDVNLRIEPGELVVVVGPSGAGKTTLVRMIMGAHEEFIENVRRRIIRELSTPVVSRALSSMGTNPKEV ADKLVKEMYQPDKGKVSLPENTELSAMIPGEVEPEIDPGVTIIEDLWSVTGDVNVAVEILNRSGISDAVLYRSPYERLSP GQKERVRLARMIAEGANLIVVDEFCSHLDPKTAMRVARSFSEMCRELEITALIITHRAEVIDALAPDKLVYVGYGLVGVE EKS >Mature_643_residues MLEGMVVNEFRERRTNYWDGEVEIETEDGKLKLRMPGTIAGWLTKGTRVRVHGADGVQSVDVFKDDVEVERRYEDEWVPV WPPFEMETEVEKRDTLGRGVYEYRLRAREAIYREDFEAIVGLEQYHYASDKDVVAVWGCNECGRSIRANLKPEECPGCGS SRIELRTIRGSLPASRFMVVELLNGEEYEPDVLAYVRVDPPIPKLNRRLDGKVERNIREKVFGKDWFHPTFEPKRGKTIE DILSACDTKAARIARVVVHPEYRADGIGRASVQAAVRWVKERRIPEMKSEKHLIEVIAQMARYHPIFESVGFVYLWDTGS GRPYLVRPLSEDAKRKVSRFIKTDKIARQHGGRLYRSRLRKLEVEPLDGPIKVKRLHKMFSTELDVKGLPKDVVKLLEAF GVLHRKIQQYALQDVNLRIEPGELVVVVGPSGAGKTTLVRMIMGAHEEFIENVRRRIIRELSTPVVSRALSSMGTNPKEV ADKLVKEMYQPDKGKVSLPENTELSAMIPGEVEPEIDPGVTIIEDLWSVTGDVNVAVEILNRSGISDAVLYRSPYERLSP GQKERVRLARMIAEGANLIVVDEFCSHLDPKTAMRVARSFSEMCRELEITALIITHRAEVIDALAPDKLVYVGYGLVGVE EKS
Specific function: Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system [H]
COG id: COG2401
COG function: function code R; ABC-type ATPase fused to a predicted acetyltransferase domain
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017908 - InterPro: IPR003593 - InterPro: IPR018449 [H]
Pfam domain/function: PF00005 ABC_tran; PF09383 NIL [H]
EC number: NA
Molecular weight: Translated: 73142; Mature: 73142
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEGMVVNEFRERRTNYWDGEVEIETEDGKLKLRMPGTIAGWLTKGTRVRVHGADGVQSV CCCCHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCEEHHCCCCCEEEEECCCCCCCH DVFKDDVEVERRYEDEWVPVWPPFEMETEVEKRDTLGRGVYEYRLRAREAIYREDFEAIV HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH GLEQYHYASDKDVVAVWGCNECGRSIRANLKPEECPGCGSSRIELRTIRGSLPASRFMVV CHHHHCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHEEEE ELLNGEEYEPDVLAYVRVDPPIPKLNRRLDGKVERNIREKVFGKDWFHPTFEPKRGKTIE EEECCCCCCCCEEEEEEECCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHH DILSACDTKAARIARVVVHPEYRADGIGRASVQAAVRWVKERRIPEMKSEKHLIEVIAQM HHHHHHCCHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ARYHPIFESVGFVYLWDTGSGRPYLVRPLSEDAKRKVSRFIKTDKIARQHGGRLYRSRLR HHCCHHHHCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH KLEVEPLDGPIKVKRLHKMFSTELDVKGLPKDVVKLLEAFGVLHRKIQQYALQDVNLRIE HCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC PGELVVVVGPSGAGKTTLVRMIMGAHEEFIENVRRRIIRELSTPVVSRALSSMGTNPKEV CCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ADKLVKEMYQPDKGKVSLPENTELSAMIPGEVEPEIDPGVTIIEDLWSVTGDVNVAVEIL HHHHHHHHHCCCCCCEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEE NRSGISDAVLYRSPYERLSPGQKERVRLARMIAEGANLIVVDEFCSHLDPKTAMRVARSF CCCCCCHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHHHHHH SEMCRELEITALIITHRAEVIDALAPDKLVYVGYGLVGVEEKS HHHHHHHHHEEEEEHHHHHHHHHCCCCCEEEEECCEEEECCCC >Mature Secondary Structure MLEGMVVNEFRERRTNYWDGEVEIETEDGKLKLRMPGTIAGWLTKGTRVRVHGADGVQSV CCCCHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCEEHHCCCCCEEEEECCCCCCCH DVFKDDVEVERRYEDEWVPVWPPFEMETEVEKRDTLGRGVYEYRLRAREAIYREDFEAIV HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH GLEQYHYASDKDVVAVWGCNECGRSIRANLKPEECPGCGSSRIELRTIRGSLPASRFMVV CHHHHCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHEEEE ELLNGEEYEPDVLAYVRVDPPIPKLNRRLDGKVERNIREKVFGKDWFHPTFEPKRGKTIE EEECCCCCCCCEEEEEEECCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHH DILSACDTKAARIARVVVHPEYRADGIGRASVQAAVRWVKERRIPEMKSEKHLIEVIAQM HHHHHHCCHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ARYHPIFESVGFVYLWDTGSGRPYLVRPLSEDAKRKVSRFIKTDKIARQHGGRLYRSRLR HHCCHHHHCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH KLEVEPLDGPIKVKRLHKMFSTELDVKGLPKDVVKLLEAFGVLHRKIQQYALQDVNLRIE HCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC PGELVVVVGPSGAGKTTLVRMIMGAHEEFIENVRRRIIRELSTPVVSRALSSMGTNPKEV CCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ADKLVKEMYQPDKGKVSLPENTELSAMIPGEVEPEIDPGVTIIEDLWSVTGDVNVAVEIL HHHHHHHHHCCCCCCEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEE NRSGISDAVLYRSPYERLSPGQKERVRLARMIAEGANLIVVDEFCSHLDPKTAMRVARSF CCCCCCHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHHHHHH SEMCRELEITALIITHRAEVIDALAPDKLVYVGYGLVGVEEKS HHHHHHHHHEEEEEHHHHHHHHHCCCCCEEEEECCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12840036 [H]