| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093949
Identifier: 20093949
GI number: 20093949
Start: 475141
End: 476415
Strand: Direct
Name: 20093949
Synonym: MK0511
Alternate gene names: NA
Gene position: 475141-476415 (Clockwise)
Preceding gene: 20093948
Following gene: 20093958
Centisome position: 28.03
GC content: 57.65
Gene sequence:
>1275_bases ATGGTCTCTCCTTTTTCTATTCAGCCACGTCCTCCTACACCTATCATGCTCATCAGGGGGTGTGGTAATACGAGCTTAAC TCATGACAAAGTACTGACGTTCGTCGTCGCCACCCTTTGCTTGTTGGGCGCCGCTAAGGCGGACCTCGTGAGCGACGTCC AACAGCGTTGCGAGCAGGCCGTGGATTGGCTTCTAACCAACCAACAACCGGACGGCGGCTGGTTGTACGAAGGTTACGGT GACAAGTCCTCCGCCATGGACACCGGAGTAGTCCTACTCGGGCTGTGCGAGGCGTACGATAGACTCCCCCAGGATCAGCA GTGTAAGGTGCGCGAAGCCGTGGATCGCGGTGTCGAGTACATCCTGAAGTGCTGGGACGGTGACAGGAAGATGTTCTGGG ATTACCCGGACGGAGGAGGAAAAGAGGAGTACATGCCGATGTACACCGTTCACGCGCTGATGGGTCTCATCGCCGTCGAG AAGAAGTTCCCTGACATCGCCGAGAAGCACGGTGTAAGTAAGTACATCGATGAAGCCCTGGAGAAACTTCTGAGTATGCA AAACGATGACGGATCGTGGAGCAACTTCGGTCCGGGTTCGTGGTCGAGCCCGGGACGGTGTACTGGACTCGTCGTATGGC TGGCGGAGTGGTCCGGTAGGTACGGACCCAGTGACGAGCGCATCGCGAAGGGTCTGAAGTACATCGAAAACCACTTGGAG AAGTCGCCGCTGGGCGGGCTGATCTCCAGTAACGGACCGAAAATAGACTTCACGGTCTGGGATATGCTGGCGTTCTACTT CTCTGGTGACGAGTATTACCGGAGTTTCGTACCGAAGCTGCAGGAGGGAGTGCTAGGGTTCCAGCATAAGGACGATGAGT TCGCGGGCGCGTTCGCAGCTCACACGTCGGTGTACGACAGTGAATACGGTCCGGAAGGAACCGCAGCTCCGTGTCCACAC AAGACGGCGCGAGTGTTGTTCGCGTTGATGCTGACGGGAGCCGACCCGAACGACGACCGAGTGAAGAAGGCCGTGGAGTT CCTGCTGAACACGAAGAGCCAGTCGGAAGGCGCGTGGTTCTGGCCGACGATGAACGACCCATCGAAACCAGACAATAATC CGATGAAGGCGTACTGTACGGGCTGGTGCCTAGCCGCACTGGGTGCGTGGCTGCAGAAGGTGCCTGCCAAGAAGCACGGG ATACCAGTATCGCCGCTGATGGTAGCGCTGGCGTTCATTCCAGCTCGTCGAGCTTGGCAGGCAGGTACTCCTTGA
Upstream 100 bases:
>100_bases TCGTGGAGAAGCTTGAAAAGAGGAAGATCCCGCTGAGCCCGGTGGTTGTATTGGCCGGGCTGCTGGCGGCGCTGGCGGTC CTCCGGCGCCGTTAACCCCG
Downstream 100 bases:
>100_bases CGACGTAGTCCAGGGAATACTTCGCGAACGCCTGCTGCTCTGCCTTCTTCCCGAGTTTTTCCAATAAATCCAGTTCTTTC TTCCAGAACGGGTCGTAGTA
Product: Terpene cyclase/mutase family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MVSPFSIQPRPPTPIMLIRGCGNTSLTHDKVLTFVVATLCLLGAAKADLVSDVQQRCEQAVDWLLTNQQPDGGWLYEGYG DKSSAMDTGVVLLGLCEAYDRLPQDQQCKVREAVDRGVEYILKCWDGDRKMFWDYPDGGGKEEYMPMYTVHALMGLIAVE KKFPDIAEKHGVSKYIDEALEKLLSMQNDDGSWSNFGPGSWSSPGRCTGLVVWLAEWSGRYGPSDERIAKGLKYIENHLE KSPLGGLISSNGPKIDFTVWDMLAFYFSGDEYYRSFVPKLQEGVLGFQHKDDEFAGAFAAHTSVYDSEYGPEGTAAPCPH KTARVLFALMLTGADPNDDRVKKAVEFLLNTKSQSEGAWFWPTMNDPSKPDNNPMKAYCTGWCLAALGAWLQKVPAKKHG IPVSPLMVALAFIPARRAWQAGTP
Sequences:
>Translated_424_residues MVSPFSIQPRPPTPIMLIRGCGNTSLTHDKVLTFVVATLCLLGAAKADLVSDVQQRCEQAVDWLLTNQQPDGGWLYEGYG DKSSAMDTGVVLLGLCEAYDRLPQDQQCKVREAVDRGVEYILKCWDGDRKMFWDYPDGGGKEEYMPMYTVHALMGLIAVE KKFPDIAEKHGVSKYIDEALEKLLSMQNDDGSWSNFGPGSWSSPGRCTGLVVWLAEWSGRYGPSDERIAKGLKYIENHLE KSPLGGLISSNGPKIDFTVWDMLAFYFSGDEYYRSFVPKLQEGVLGFQHKDDEFAGAFAAHTSVYDSEYGPEGTAAPCPH KTARVLFALMLTGADPNDDRVKKAVEFLLNTKSQSEGAWFWPTMNDPSKPDNNPMKAYCTGWCLAALGAWLQKVPAKKHG IPVSPLMVALAFIPARRAWQAGTP >Mature_424_residues MVSPFSIQPRPPTPIMLIRGCGNTSLTHDKVLTFVVATLCLLGAAKADLVSDVQQRCEQAVDWLLTNQQPDGGWLYEGYG DKSSAMDTGVVLLGLCEAYDRLPQDQQCKVREAVDRGVEYILKCWDGDRKMFWDYPDGGGKEEYMPMYTVHALMGLIAVE KKFPDIAEKHGVSKYIDEALEKLLSMQNDDGSWSNFGPGSWSSPGRCTGLVVWLAEWSGRYGPSDERIAKGLKYIENHLE KSPLGGLISSNGPKIDFTVWDMLAFYFSGDEYYRSFVPKLQEGVLGFQHKDDEFAGAFAAHTSVYDSEYGPEGTAAPCPH KTARVLFALMLTGADPNDDRVKKAVEFLLNTKSQSEGAWFWPTMNDPSKPDNNPMKAYCTGWCLAALGAWLQKVPAKKHG IPVSPLMVALAFIPARRAWQAGTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46944; Mature: 46944
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSPFSIQPRPPTPIMLIRGCGNTSLTHDKVLTFVVATLCLLGAAKADLVSDVQQRCEQA CCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDWLLTNQQPDGGWLYEGYGDKSSAMDTGVVLLGLCEAYDRLPQDQQCKVREAVDRGVEY HHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ILKCWDGDRKMFWDYPDGGGKEEYMPMYTVHALMGLIAVEKKFPDIAEKHGVSKYIDEAL HHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHH EKLLSMQNDDGSWSNFGPGSWSSPGRCTGLVVWLAEWSGRYGPSDERIAKGLKYIENHLE HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEHHCCCCCCCHHHHHHHHHHHHHHHH KSPLGGLISSNGPKIDFTVWDMLAFYFSGDEYYRSFVPKLQEGVLGFQHKDDEFAGAFAA CCCCCCCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH HTSVYDSEYGPEGTAAPCPHKTARVLFALMLTGADPNDDRVKKAVEFLLNTKSQSEGAWF HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEE WPTMNDPSKPDNNPMKAYCTGWCLAALGAWLQKVPAKKHGIPVSPLMVALAFIPARRAWQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHCCC AGTP CCCC >Mature Secondary Structure MVSPFSIQPRPPTPIMLIRGCGNTSLTHDKVLTFVVATLCLLGAAKADLVSDVQQRCEQA CCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDWLLTNQQPDGGWLYEGYGDKSSAMDTGVVLLGLCEAYDRLPQDQQCKVREAVDRGVEY HHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ILKCWDGDRKMFWDYPDGGGKEEYMPMYTVHALMGLIAVEKKFPDIAEKHGVSKYIDEAL HHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHH EKLLSMQNDDGSWSNFGPGSWSSPGRCTGLVVWLAEWSGRYGPSDERIAKGLKYIENHLE HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEHHCCCCCCCHHHHHHHHHHHHHHHH KSPLGGLISSNGPKIDFTVWDMLAFYFSGDEYYRSFVPKLQEGVLGFQHKDDEFAGAFAA CCCCCCCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH HTSVYDSEYGPEGTAAPCPHKTARVLFALMLTGADPNDDRVKKAVEFLLNTKSQSEGAWF HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEE WPTMNDPSKPDNNPMKAYCTGWCLAALGAWLQKVPAKKHGIPVSPLMVALAFIPARRAWQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHCCC AGTP CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA