| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is cpgS
Identifier: 20093943
GI number: 20093943
Start: 466623
End: 467993
Strand: Direct
Name: cpgS
Synonym: MK0505
Alternate gene names: 20093943
Gene position: 466623-467993 (Clockwise)
Preceding gene: 20093942
Following gene: 20093945
Centisome position: 27.53
GC content: 62.36
Gene sequence:
>1371_bases CTGACCGCCGTGAAGAGGATACTGGCGTTGGTGGACGGTGAGCACTACATCCCCGTAACTCGGGAGGCGTTAGAGACTGT GGAGGAATTGGACCTCGGAGAGCTCGTAGGAGCCGTGTTCATCGGAGGGACTGAGAAGATCAGCGAGCCCGAGGCCGTCA AGCGGGAGCTGGGTGTACGGGTCTGGCTATCGGAGTCGGAAGACGAGATACCGGTGGACATGATCGTCAAGGTGATCGAG GAAGAGGACGTCGACGTGGTGCTGGACCTGAGCGACGAGCCCGTGGTTAGCCCCGACAACAGGTTCGAGATAGCCTCAGC GGTACTCTCCGCGGGAGCGGAGTACTGGTGCCCGGACCTCCGACTGAAGCCGGTGGAGTTCCACGACGTCCTCGAGAAAC CATCGCTTCGGATCATAGGGACCGGGAAGAGGGTGGGCAAGACCGCCGTCTCCGCCTACACCTGTCGTGTGCTCAACGCA CGGGGCTACAACCCGTGCGTAGTGGTGATGGGTCGTGGAGGTCCGAGGGAGCCCGAAATAGTACGTGGGGACGAGATCGA GCTGACTCCCGAGTACCTACTGAAAGAGGCCGAGAAGGGTAAGCACGCGGCGAGCGATCACTGGGAGGACGCGCTCCTCA GCAGGATCCCGACTGTCGGATGTCGGCGGTGCGCGGGTGGACTGGCGGGACGTACCTTCACCACGAACATCGTGCGCGGT GCCAAGATAGCTAACGAGTTGCCGGCCGACTTCGTCGTGGTCGAAGGTAGTGGCGCGGCCGTACCACCGATCAAGACGGA CGCGGGTATCGTGATCGTCGGAGCCAACCAGCCGTTAGAGCACATCGGCGGGTACTTAGGACCTTATAGGATCCGGATGT GCGACCTGGCGATCATCACGATGTGCGAGGAACCGATGGCGGACGACGCGAAAATCAGGAAAGTCGAGCGCACCGTCCGG GAAGCCGGCGACGGCATCGAGGTAGTACTCTCGGTGTTCCGACCTAAACCCACCGAGGACGTGGAGGGTAAGCGGGCGAT GTTCGTGACGACGGCACCCGAGGAGGTCGTCTCGAGGCTCGTCGAGCACCTGGAAGAGGAATACGGGTGTGAGATCGTCG GGACGTCGCCGCACCTCAGCAACCGTCCGAAGCTCCGCAAAGACCTGGAGAAGTACATCGACGATGCGGACATACTGCTC ACGGAGCTGAAGGCGGCCGCCGTCGACGTGGCCACTCGGGAGGCCCTGAAGGCCGGACTGGGCGTGGTGTACGTGGACAA CGTCCCCATCGCCGTCGGAGGTGATTACGACCACGTGGGTGACGCCGTGGAGAACGTAGCCGAGCTGGCGATCGATCGGT TCGAGGGTTAA
Upstream 100 bases:
>100_bases ACTGCGTGGCGTCGCTTGAGGAGGAATCCCACCGGTTCGCTTTGAAGCACATGGAAAAGCTCGGGGCGGAGGTAGTCGAT TCGGAGGAGATACTGGGGGA
Downstream 100 bases:
>100_bases TCACTGTCGATCCCGAACACCACCTCGGCGAAAGCGCGCTCGACATCTACCCGCTCTACGAACCGGCTGCCCCGTGACGC CGCGATCTCTCCGGCCCGTT
Product: cyclic 2,3-diphosphoglycerate-synthetase
Products: NA
Alternate protein names: cDPGS
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MTAVKRILALVDGEHYIPVTREALETVEELDLGELVGAVFIGGTEKISEPEAVKRELGVRVWLSESEDEIPVDMIVKVIE EEDVDVVLDLSDEPVVSPDNRFEIASAVLSAGAEYWCPDLRLKPVEFHDVLEKPSLRIIGTGKRVGKTAVSAYTCRVLNA RGYNPCVVVMGRGGPREPEIVRGDEIELTPEYLLKEAEKGKHAASDHWEDALLSRIPTVGCRRCAGGLAGRTFTTNIVRG AKIANELPADFVVVEGSGAAVPPIKTDAGIVIVGANQPLEHIGGYLGPYRIRMCDLAIITMCEEPMADDAKIRKVERTVR EAGDGIEVVLSVFRPKPTEDVEGKRAMFVTTAPEEVVSRLVEHLEEEYGCEIVGTSPHLSNRPKLRKDLEKYIDDADILL TELKAAAVDVATREALKAGLGVVYVDNVPIAVGGDYDHVGDAVENVAELAIDRFEG
Sequences:
>Translated_456_residues MTAVKRILALVDGEHYIPVTREALETVEELDLGELVGAVFIGGTEKISEPEAVKRELGVRVWLSESEDEIPVDMIVKVIE EEDVDVVLDLSDEPVVSPDNRFEIASAVLSAGAEYWCPDLRLKPVEFHDVLEKPSLRIIGTGKRVGKTAVSAYTCRVLNA RGYNPCVVVMGRGGPREPEIVRGDEIELTPEYLLKEAEKGKHAASDHWEDALLSRIPTVGCRRCAGGLAGRTFTTNIVRG AKIANELPADFVVVEGSGAAVPPIKTDAGIVIVGANQPLEHIGGYLGPYRIRMCDLAIITMCEEPMADDAKIRKVERTVR EAGDGIEVVLSVFRPKPTEDVEGKRAMFVTTAPEEVVSRLVEHLEEEYGCEIVGTSPHLSNRPKLRKDLEKYIDDADILL TELKAAAVDVATREALKAGLGVVYVDNVPIAVGGDYDHVGDAVENVAELAIDRFEG >Mature_455_residues TAVKRILALVDGEHYIPVTREALETVEELDLGELVGAVFIGGTEKISEPEAVKRELGVRVWLSESEDEIPVDMIVKVIEE EDVDVVLDLSDEPVVSPDNRFEIASAVLSAGAEYWCPDLRLKPVEFHDVLEKPSLRIIGTGKRVGKTAVSAYTCRVLNAR GYNPCVVVMGRGGPREPEIVRGDEIELTPEYLLKEAEKGKHAASDHWEDALLSRIPTVGCRRCAGGLAGRTFTTNIVRGA KIANELPADFVVVEGSGAAVPPIKTDAGIVIVGANQPLEHIGGYLGPYRIRMCDLAIITMCEEPMADDAKIRKVERTVRE AGDGIEVVLSVFRPKPTEDVEGKRAMFVTTAPEEVVSRLVEHLEEEYGCEIVGTSPHLSNRPKLRKDLEKYIDDADILLT ELKAAAVDVATREALKAGLGVVYVDNVPIAVGGDYDHVGDAVENVAELAIDRFEG
Specific function: Catalyzes the formation of cyclic 2,3-diphosphoglycerate (cDPG) by formation of an intramolecular phosphoanhydride bond at the expense of ATP
COG id: COG2403
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cyclic 2,3-diphosphoglycerate synthetase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CPGS_METKA (Q8TY02)
Other databases:
- EMBL: AE009439 - RefSeq: NP_613790.1 - ProteinModelPortal: Q8TY02 - GeneID: 1476606 - GenomeReviews: AE009439_GR - KEGG: mka:MK0505 - NMPDR: fig|190192.1.peg.503 - HOGENOM: HBG539597 - OMA: LIDGEHY - ProtClustDB: CLSK785466 - BioCyc: MKAN190192:MK0505-MONOMER - GO: GO:0005737 - HAMAP: MF_01908 - InterPro: IPR016557 - PIRSF: PIRSF009445
Pfam domain/function: NA
EC number: 4.6.1.-
Molecular weight: Translated: 49620; Mature: 49489
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVKRILALVDGEHYIPVTREALETVEELDLGELVGAVFIGGTEKISEPEAVKRELGVR CHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHCCEE VWLSESEDEIPVDMIVKVIEEEDVDVVLDLSDEPVVSPDNRFEIASAVLSAGAEYWCPDL EEECCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC RLKPVEFHDVLEKPSLRIIGTGKRVGKTAVSAYTCRVLNARGYNPCVVVMGRGGPREPEI EECCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCCCCCE VRGDEIELTPEYLLKEAEKGKHAASDHWEDALLSRIPTVGCRRCAGGLAGRTFTTNIVRG ECCCCEEECHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHH AKIANELPADFVVVEGSGAAVPPIKTDAGIVIVGANQPLEHIGGYLGPYRIRMCDLAIIT HHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCHHHHHHHHHHHH MCEEPMADDAKIRKVERTVREAGDGIEVVLSVFRPKPTEDVEGKRAMFVTTAPEEVVSRL HHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHH VEHLEEEYGCEIVGTSPHLSNRPKLRKDLEKYIDDADILLTELKAAAVDVATREALKAGL HHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC GVVYVDNVPIAVGGDYDHVGDAVENVAELAIDRFEG CEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TAVKRILALVDGEHYIPVTREALETVEELDLGELVGAVFIGGTEKISEPEAVKRELGVR HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHCCEE VWLSESEDEIPVDMIVKVIEEEDVDVVLDLSDEPVVSPDNRFEIASAVLSAGAEYWCPDL EEECCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC RLKPVEFHDVLEKPSLRIIGTGKRVGKTAVSAYTCRVLNARGYNPCVVVMGRGGPREPEI EECCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCCCCCE VRGDEIELTPEYLLKEAEKGKHAASDHWEDALLSRIPTVGCRRCAGGLAGRTFTTNIVRG ECCCCEEECHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHH AKIANELPADFVVVEGSGAAVPPIKTDAGIVIVGANQPLEHIGGYLGPYRIRMCDLAIIT HHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCHHHHHHHHHHHH MCEEPMADDAKIRKVERTVREAGDGIEVVLSVFRPKPTEDVEGKRAMFVTTAPEEVVSRL HHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHH VEHLEEEYGCEIVGTSPHLSNRPKLRKDLEKYIDDADILLTELKAAAVDVATREALKAGL HHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC GVVYVDNVPIAVGGDYDHVGDAVENVAELAIDRFEG CEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014