| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093893
Identifier: 20093893
GI number: 20093893
Start: 423708
End: 424130
Strand: Direct
Name: 20093893
Synonym: MK0455
Alternate gene names: NA
Gene position: 423708-424130 (Clockwise)
Preceding gene: 20093887
Following gene: 20093894
Centisome position: 25.0
GC content: 59.57
Gene sequence:
>423_bases GTGAATATCGTCGGTGTCGACGTCTCGGGCCGACACGCGGAGGAGGACGGTCATTATAATAGGATCACGGCCTGCGTGTC GGCCGAGGTGGATGGGTTCAATGTGTTTACGGTCAGAGATGTGAACGTGTTCGTCGTATGTACTCGCGAGCCCCCGAACT TGCGGACGCTGACCGAGGAAGTCTCCCGGGCCCTTAACGGCCTGGACAAGGACGATGAGTACATGGTGGTGGCGGAACCG GGTGAGTTCTTTGGAGAACCGGAGTGGAGGGTCTCGGCCCTTTTAGGGGCCCCGTTCAAGTACGCCGAGACCGTGGCCGA GCGAGAGGTAGTGGAAATGGCGCATAAGCTCGCCTACGGAGTCTACAGAGGCGTGAAGATGGGGTTGAAGGTTGCCCAGT CGCCCTCGGGCGGTTTTGGTTGA
Upstream 100 bases:
>100_bases GCTTGTGAGTATCTTCTCGTAAGAATCCGACCTGATCACCACGAACAAGCTTCGGTCCCCTCGCTCTCCCGATGCTGGGG GGTTTAACCTGGGCGTCAGG
Downstream 100 bases:
>100_bases ACGGTTGGAGTGGAGACAGGAGAGCCGCATTGATGAGCTGAAAGAGCTGGCCGAATCTGCCGGCTACGACGTCGTCGGCT CGTTCAGACAGGTCCGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MNIVGVDVSGRHAEEDGHYNRITACVSAEVDGFNVFTVRDVNVFVVCTREPPNLRTLTEEVSRALNGLDKDDEYMVVAEP GEFFGEPEWRVSALLGAPFKYAETVAEREVVEMAHKLAYGVYRGVKMGLKVAQSPSGGFG
Sequences:
>Translated_140_residues MNIVGVDVSGRHAEEDGHYNRITACVSAEVDGFNVFTVRDVNVFVVCTREPPNLRTLTEEVSRALNGLDKDDEYMVVAEP GEFFGEPEWRVSALLGAPFKYAETVAEREVVEMAHKLAYGVYRGVKMGLKVAQSPSGGFG >Mature_140_residues MNIVGVDVSGRHAEEDGHYNRITACVSAEVDGFNVFTVRDVNVFVVCTREPPNLRTLTEEVSRALNGLDKDDEYMVVAEP GEFFGEPEWRVSALLGAPFKYAETVAEREVVEMAHKLAYGVYRGVKMGLKVAQSPSGGFG
Specific function: Unknown
COG id: COG4921
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15371; Mature: 15371
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIVGVDVSGRHAEEDGHYNRITACVSAEVDGFNVFTVRDVNVFVVCTREPPNLRTLTEE CEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEECCCCCHHHHHHH VSRALNGLDKDDEYMVVAEPGEFFGEPEWRVSALLGAPFKYAETVAEREVVEMAHKLAYG HHHHHCCCCCCCCEEEEECCHHHCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHH VYRGVKMGLKVAQSPSGGFG HHHHHHHCEEEECCCCCCCC >Mature Secondary Structure MNIVGVDVSGRHAEEDGHYNRITACVSAEVDGFNVFTVRDVNVFVVCTREPPNLRTLTEE CEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEECCCCCHHHHHHH VSRALNGLDKDDEYMVVAEPGEFFGEPEWRVSALLGAPFKYAETVAEREVVEMAHKLAYG HHHHHCCCCCCCCEEEEECCHHHCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHH VYRGVKMGLKVAQSPSGGFG HHHHHHHCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA