| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093864
Identifier: 20093864
GI number: 20093864
Start: 400786
End: 401517
Strand: Direct
Name: 20093864
Synonym: MK0426
Alternate gene names: NA
Gene position: 400786-401517 (Clockwise)
Preceding gene: 20093863
Following gene: 20093865
Centisome position: 23.65
GC content: 50.41
Gene sequence:
>732_bases ATGATCATAGACGTGCATAACCATCTAGGAGAGGATATCGACAGTACAGTTCAAACACCCCAGATGCTGTTGGCAAGGAT GGAAGCGGCGGGCGTAGACATCGCGGTAGTGTTTCCGTTCAATGACGTCGATCCGGGAGTGTGTTTCTCGAAAGCCAATG ATCGAATCGCGAAGGCGTGCGAAGAGTACGATGAGTTCGTGGGATTCTGTCGGGTAGATCCGAACTACGAGGAACGCGCC GTAGAAGAAGTGGAAAGATGCATAGAGGAGCTGGGGCTTAAAGGCGTAAAACTCCATCCCCGGAGCCAGTCGTTTTACCC CGACGATCCCGAGGCCGTGAAGGTCGTTGAAAAAGCCGCAGACCTGGGAGTACCCGTGATACTCCACACTGCACGCGGTG AACCGTTCTCCGATCCCGTCCGCGTCGGTAAGTTAGCGGAGGAAGTTCCTGACGTTCAGCTGATCATGGCGCATATGGGT AAGGAGCTAGGATATGATGCGGCGATTGAAGTAGCGGAAAACTACGAGAATGTTTACCTCGAAGTATCGTTGGTAAAAGA CCCCAAAGTAATTGAGAAGACGGCCGAACGTGTGGGTGATGATCGGATAATTTTCGGGTCTGATTCACCTTATGGTAGCC CATCAGTACAACTTGAAATCGTAAAAGAAGCGGATGTTAATCACGATAAAATCTTGGAGGAAAATGCTGCAAATATATTG GGGTTGCGGTGA
Upstream 100 bases:
>100_bases CGAAACGGTGTAGAAATTCCCTTAGACGAGAGTGACAGAATAGTAAACGTAATGTCAGAGCTGGAGTACTTAATGCGTTC GATGAGGGGATTGTTGTGAA
Downstream 100 bases:
>100_bases AGATTGCTTCGTACAAAGGTTATAGAGTTAGTTTTACATGATGGACCAATAACTGTCGATGAAATTTCAAAGAAGTTAAA AATTGATTCAGAGTCGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Metal-Dependent Hydrolase; TIM-Barrel Fold Metal-Dependent Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Amidohydrolase Family; Metal-Dependent Hydrolase Amidohydrolase 2 Family
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MIIDVHNHLGEDIDSTVQTPQMLLARMEAAGVDIAVVFPFNDVDPGVCFSKANDRIAKACEEYDEFVGFCRVDPNYEERA VEEVERCIEELGLKGVKLHPRSQSFYPDDPEAVKVVEKAADLGVPVILHTARGEPFSDPVRVGKLAEEVPDVQLIMAHMG KELGYDAAIEVAENYENVYLEVSLVKDPKVIEKTAERVGDDRIIFGSDSPYGSPSVQLEIVKEADVNHDKILEENAANIL GLR
Sequences:
>Translated_243_residues MIIDVHNHLGEDIDSTVQTPQMLLARMEAAGVDIAVVFPFNDVDPGVCFSKANDRIAKACEEYDEFVGFCRVDPNYEERA VEEVERCIEELGLKGVKLHPRSQSFYPDDPEAVKVVEKAADLGVPVILHTARGEPFSDPVRVGKLAEEVPDVQLIMAHMG KELGYDAAIEVAENYENVYLEVSLVKDPKVIEKTAERVGDDRIIFGSDSPYGSPSVQLEIVKEADVNHDKILEENAANIL GLR >Mature_243_residues MIIDVHNHLGEDIDSTVQTPQMLLARMEAAGVDIAVVFPFNDVDPGVCFSKANDRIAKACEEYDEFVGFCRVDPNYEERA VEEVERCIEELGLKGVKLHPRSQSFYPDDPEAVKVVEKAADLGVPVILHTARGEPFSDPVRVGKLAEEVPDVQLIMAHMG KELGYDAAIEVAENYENVYLEVSLVKDPKVIEKTAERVGDDRIIFGSDSPYGSPSVQLEIVKEADVNHDKILEENAANIL GLR
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26892; Mature: 26892
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIDVHNHLGEDIDSTVQTPQMLLARMEAAGVDIAVVFPFNDVDPGVCFSKANDRIAKAC CEEECCHHHCCHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHCCCHHHHHHH EEYDEFVGFCRVDPNYEERAVEEVERCIEELGLKGVKLHPRSQSFYPDDPEAVKVVEKAA HHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHH DLGVPVILHTARGEPFSDPVRVGKLAEEVPDVQLIMAHMGKELGYDAAIEVAENYENVYL HCCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEE EVSLVKDPKVIEKTAERVGDDRIIFGSDSPYGSPSVQLEIVKEADVNHDKILEENAANIL EEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHCHHHHC GLR CCC >Mature Secondary Structure MIIDVHNHLGEDIDSTVQTPQMLLARMEAAGVDIAVVFPFNDVDPGVCFSKANDRIAKAC CEEECCHHHCCHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHCCCHHHHHHH EEYDEFVGFCRVDPNYEERAVEEVERCIEELGLKGVKLHPRSQSFYPDDPEAVKVVEKAA HHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHH DLGVPVILHTARGEPFSDPVRVGKLAEEVPDVQLIMAHMGKELGYDAAIEVAENYENVYL HCCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEE EVSLVKDPKVIEKTAERVGDDRIIFGSDSPYGSPSVQLEIVKEADVNHDKILEENAANIL EEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHCHHHHC GLR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA