| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093863
Identifier: 20093863
GI number: 20093863
Start: 399333
End: 400784
Strand: Direct
Name: 20093863
Synonym: MK0425
Alternate gene names: NA
Gene position: 399333-400784 (Clockwise)
Preceding gene: 20093862
Following gene: 20093864
Centisome position: 23.56
GC content: 44.42
Gene sequence:
>1452_bases GTGACAAGACTGTTTTTCAGGCGACGAAGCGTGGAATCCTTCGCGGAGAGAATCGAAGTCAAGGTAGGGGTGGAAGAGGA GCTTTTCCTCATCGACCGGGACGGATCACTGACTCGGGCTGCAGACGATGTAATCGTGAAGGCGGCGGAGCTGTTGGAGT CAGACTCGAATCTCCTAGAGGATTGCTGGCGAACCGTTCTGGGGTTGGATCCCGAACCCAATCCGGCCCAAATCGAATAC CTGACCCAGCCTTTACCTCCCGATGAAGTGATCGAGGCCTGTGAGATAGGCAGGGAACTCATAAAGAAAGCCGCCGAGGA GTTGGGACTACAGGTTATGTTAGAAAGTATGCATCCTTTCGAGAGCGACCCGCTACCTATTAACGGAACCCACATCAACG TGATGGTGAAACTTAAGGATCAACCGTACATGACTCCAAAGCAGATATTAGTAGTTTACAATTGGTTGTGGCATAACTTA CCAATTATAATCGCAGCAACTGCGAACACACCATATTGCTGTGGCGGAAAAAATCTCGCAGCTAGTTGTCGCCTCCTCAA AAGCAGGGTACTCAAACCGAATTACTACGCAGCGATAAAGCGTCTGGAGAAGCGCCCATACTTGACGAAAACCCAGTATT ATGGAAGGTTGAGGTACAGACTGAGACTTAGGAAGGATACTGAGTTCGAGGAGCGGGTCGTAGCGCACCCCGACGGTCGA AGGCTCGTGGACATAACCCCCAGAGGACCCGCATCGAACGTCACGGGAGACGAGAACGACAGCCCGACTAGGAACAGAGT TGAGGTGCGGGTAATCGATAATCAAAAGTCCATGAAATATTTACATGATGTGGTAATGCTTATAGTAGGATTATCTTTGG AAGCACTATATATATATGAAGTAGAGGGTAAATTACCGCCAAATGATCCTAATCATTTTGATAATAGAAGAGAAGCCATA GAGAAAGGTATTAACGCTACTTTCGTTATTAACGGTAGGGAAATTGATGCTGAAGACGCCTTACTAAAAATTATAAGTAG AGTAGATAAATTTTTAGAGCATTTGGGATTACGTTTCGTATCTCCTCTTAAGAATGGAAAAGTAGAGTTACAAGAGAGGC CAAAACTAAATGTAGAGTATGTACATAAGGATGTCATAAAGTATATCGGAAATTACGCAGAGGTTATATTAGGGTCGAAT AAAACTGTTGAAATTAAAGGGAAAAGGTACACAATTCCGAAAGGTACTAAAGTAATCGGTAAGTTAGTTCCGATGGCATC TTACAAGTACAGAGTTGATAACAAGGGTTTTGTTAAGGATATAATTAAGGGCGTTGTAACACTCGGAATAAAGCGAAACG GTGTAGAAATTCCCTTAGACGAGAGTGACAGAATAGTAAACGTAATGTCAGAGCTGGAGTACTTAATGCGTTCGATGAGG GGATTGTTGTGA
Upstream 100 bases:
>100_bases GAGAGTACGGGAAAATAATCACGGAAGAGGAATCGGAACGCGAGGAGCCCAGAAGTCGCAAGCCCGTCCAGCGCACACTC GACGAGCTGATAGGCCGGGG
Downstream 100 bases:
>100_bases AATGATCATAGACGTGCATAACCATCTAGGAGAGGATATCGACAGTACAGTTCAAACACCCCAGATGCTGTTGGCAAGGA TGGAAGCGGCGGGCGTAGAC
Product: metal-dependent hydrolase of the TIM-barrel fold
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MTRLFFRRRSVESFAERIEVKVGVEEELFLIDRDGSLTRAADDVIVKAAELLESDSNLLEDCWRTVLGLDPEPNPAQIEY LTQPLPPDEVIEACEIGRELIKKAAEELGLQVMLESMHPFESDPLPINGTHINVMVKLKDQPYMTPKQILVVYNWLWHNL PIIIAATANTPYCCGGKNLAASCRLLKSRVLKPNYYAAIKRLEKRPYLTKTQYYGRLRYRLRLRKDTEFEERVVAHPDGR RLVDITPRGPASNVTGDENDSPTRNRVEVRVIDNQKSMKYLHDVVMLIVGLSLEALYIYEVEGKLPPNDPNHFDNRREAI EKGINATFVINGREIDAEDALLKIISRVDKFLEHLGLRFVSPLKNGKVELQERPKLNVEYVHKDVIKYIGNYAEVILGSN KTVEIKGKRYTIPKGTKVIGKLVPMASYKYRVDNKGFVKDIIKGVVTLGIKRNGVEIPLDESDRIVNVMSELEYLMRSMR GLL
Sequences:
>Translated_483_residues MTRLFFRRRSVESFAERIEVKVGVEEELFLIDRDGSLTRAADDVIVKAAELLESDSNLLEDCWRTVLGLDPEPNPAQIEY LTQPLPPDEVIEACEIGRELIKKAAEELGLQVMLESMHPFESDPLPINGTHINVMVKLKDQPYMTPKQILVVYNWLWHNL PIIIAATANTPYCCGGKNLAASCRLLKSRVLKPNYYAAIKRLEKRPYLTKTQYYGRLRYRLRLRKDTEFEERVVAHPDGR RLVDITPRGPASNVTGDENDSPTRNRVEVRVIDNQKSMKYLHDVVMLIVGLSLEALYIYEVEGKLPPNDPNHFDNRREAI EKGINATFVINGREIDAEDALLKIISRVDKFLEHLGLRFVSPLKNGKVELQERPKLNVEYVHKDVIKYIGNYAEVILGSN KTVEIKGKRYTIPKGTKVIGKLVPMASYKYRVDNKGFVKDIIKGVVTLGIKRNGVEIPLDESDRIVNVMSELEYLMRSMR GLL >Mature_482_residues TRLFFRRRSVESFAERIEVKVGVEEELFLIDRDGSLTRAADDVIVKAAELLESDSNLLEDCWRTVLGLDPEPNPAQIEYL TQPLPPDEVIEACEIGRELIKKAAEELGLQVMLESMHPFESDPLPINGTHINVMVKLKDQPYMTPKQILVVYNWLWHNLP IIIAATANTPYCCGGKNLAASCRLLKSRVLKPNYYAAIKRLEKRPYLTKTQYYGRLRYRLRLRKDTEFEERVVAHPDGRR LVDITPRGPASNVTGDENDSPTRNRVEVRVIDNQKSMKYLHDVVMLIVGLSLEALYIYEVEGKLPPNDPNHFDNRREAIE KGINATFVINGREIDAEDALLKIISRVDKFLEHLGLRFVSPLKNGKVELQERPKLNVEYVHKDVIKYIGNYAEVILGSNK TVEIKGKRYTIPKGTKVIGKLVPMASYKYRVDNKGFVKDIIKGVVTLGIKRNGVEIPLDESDRIVNVMSELEYLMRSMRG LL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55197; Mature: 55066
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLFFRRRSVESFAERIEVKVGVEEELFLIDRDGSLTRAADDVIVKAAELLESDSNLLE CCCHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHH DCWRTVLGLDPEPNPAQIEYLTQPLPPDEVIEACEIGRELIKKAAEELGLQVMLESMHPF HHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ESDPLPINGTHINVMVKLKDQPYMTPKQILVVYNWLWHNLPIIIAATANTPYCCGGKNLA CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCHH ASCRLLKSRVLKPNYYAAIKRLEKRPYLTKTQYYGRLRYRLRLRKDTEFEERVVAHPDGR HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHEEEEEEEECCCCCHHHHEEECCCCC RLVDITPRGPASNVTGDENDSPTRNRVEVRVIDNQKSMKYLHDVVMLIVGLSLEALYIYE EEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEEE VEGKLPPNDPNHFDNRREAIEKGINATFVINGREIDAEDALLKIISRVDKFLEHLGLRFV ECCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCHHHH SPLKNGKVELQERPKLNVEYVHKDVIKYIGNYAEVILGSNKTVEIKGKRYTIPKGTKVIG HHCCCCCEEECCCCCCCHHHHHHHHHHHHCCHHHEEECCCCEEEECCCEEECCCCHHHHH KLVPMASYKYRVDNKGFVKDIIKGVVTLGIKRNGVEIPLDESDRIVNVMSELEYLMRSMR HHHCCCCEEEEECCCCHHHHHHHHHHHHCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH GLL CCC >Mature Secondary Structure TRLFFRRRSVESFAERIEVKVGVEEELFLIDRDGSLTRAADDVIVKAAELLESDSNLLE CCHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHH DCWRTVLGLDPEPNPAQIEYLTQPLPPDEVIEACEIGRELIKKAAEELGLQVMLESMHPF HHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ESDPLPINGTHINVMVKLKDQPYMTPKQILVVYNWLWHNLPIIIAATANTPYCCGGKNLA CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCHH ASCRLLKSRVLKPNYYAAIKRLEKRPYLTKTQYYGRLRYRLRLRKDTEFEERVVAHPDGR HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHEEEEEEEECCCCCHHHHEEECCCCC RLVDITPRGPASNVTGDENDSPTRNRVEVRVIDNQKSMKYLHDVVMLIVGLSLEALYIYE EEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEEE VEGKLPPNDPNHFDNRREAIEKGINATFVINGREIDAEDALLKIISRVDKFLEHLGLRFV ECCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCHHHH SPLKNGKVELQERPKLNVEYVHKDVIKYIGNYAEVILGSNKTVEIKGKRYTIPKGTKVIG HHCCCCCEEECCCCCCCHHHHHHHHHHHHCCHHHEEECCCCEEEECCCEEECCCCHHHHH KLVPMASYKYRVDNKGFVKDIIKGVVTLGIKRNGVEIPLDESDRIVNVMSELEYLMRSMR HHHCCCCEEEEECCCCHHHHHHHHHHHHCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH GLL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA