Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093863

Identifier: 20093863

GI number: 20093863

Start: 399333

End: 400784

Strand: Direct

Name: 20093863

Synonym: MK0425

Alternate gene names: NA

Gene position: 399333-400784 (Clockwise)

Preceding gene: 20093862

Following gene: 20093864

Centisome position: 23.56

GC content: 44.42

Gene sequence:

>1452_bases
GTGACAAGACTGTTTTTCAGGCGACGAAGCGTGGAATCCTTCGCGGAGAGAATCGAAGTCAAGGTAGGGGTGGAAGAGGA
GCTTTTCCTCATCGACCGGGACGGATCACTGACTCGGGCTGCAGACGATGTAATCGTGAAGGCGGCGGAGCTGTTGGAGT
CAGACTCGAATCTCCTAGAGGATTGCTGGCGAACCGTTCTGGGGTTGGATCCCGAACCCAATCCGGCCCAAATCGAATAC
CTGACCCAGCCTTTACCTCCCGATGAAGTGATCGAGGCCTGTGAGATAGGCAGGGAACTCATAAAGAAAGCCGCCGAGGA
GTTGGGACTACAGGTTATGTTAGAAAGTATGCATCCTTTCGAGAGCGACCCGCTACCTATTAACGGAACCCACATCAACG
TGATGGTGAAACTTAAGGATCAACCGTACATGACTCCAAAGCAGATATTAGTAGTTTACAATTGGTTGTGGCATAACTTA
CCAATTATAATCGCAGCAACTGCGAACACACCATATTGCTGTGGCGGAAAAAATCTCGCAGCTAGTTGTCGCCTCCTCAA
AAGCAGGGTACTCAAACCGAATTACTACGCAGCGATAAAGCGTCTGGAGAAGCGCCCATACTTGACGAAAACCCAGTATT
ATGGAAGGTTGAGGTACAGACTGAGACTTAGGAAGGATACTGAGTTCGAGGAGCGGGTCGTAGCGCACCCCGACGGTCGA
AGGCTCGTGGACATAACCCCCAGAGGACCCGCATCGAACGTCACGGGAGACGAGAACGACAGCCCGACTAGGAACAGAGT
TGAGGTGCGGGTAATCGATAATCAAAAGTCCATGAAATATTTACATGATGTGGTAATGCTTATAGTAGGATTATCTTTGG
AAGCACTATATATATATGAAGTAGAGGGTAAATTACCGCCAAATGATCCTAATCATTTTGATAATAGAAGAGAAGCCATA
GAGAAAGGTATTAACGCTACTTTCGTTATTAACGGTAGGGAAATTGATGCTGAAGACGCCTTACTAAAAATTATAAGTAG
AGTAGATAAATTTTTAGAGCATTTGGGATTACGTTTCGTATCTCCTCTTAAGAATGGAAAAGTAGAGTTACAAGAGAGGC
CAAAACTAAATGTAGAGTATGTACATAAGGATGTCATAAAGTATATCGGAAATTACGCAGAGGTTATATTAGGGTCGAAT
AAAACTGTTGAAATTAAAGGGAAAAGGTACACAATTCCGAAAGGTACTAAAGTAATCGGTAAGTTAGTTCCGATGGCATC
TTACAAGTACAGAGTTGATAACAAGGGTTTTGTTAAGGATATAATTAAGGGCGTTGTAACACTCGGAATAAAGCGAAACG
GTGTAGAAATTCCCTTAGACGAGAGTGACAGAATAGTAAACGTAATGTCAGAGCTGGAGTACTTAATGCGTTCGATGAGG
GGATTGTTGTGA

Upstream 100 bases:

>100_bases
GAGAGTACGGGAAAATAATCACGGAAGAGGAATCGGAACGCGAGGAGCCCAGAAGTCGCAAGCCCGTCCAGCGCACACTC
GACGAGCTGATAGGCCGGGG

Downstream 100 bases:

>100_bases
AATGATCATAGACGTGCATAACCATCTAGGAGAGGATATCGACAGTACAGTTCAAACACCCCAGATGCTGTTGGCAAGGA
TGGAAGCGGCGGGCGTAGAC

Product: metal-dependent hydrolase of the TIM-barrel fold

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MTRLFFRRRSVESFAERIEVKVGVEEELFLIDRDGSLTRAADDVIVKAAELLESDSNLLEDCWRTVLGLDPEPNPAQIEY
LTQPLPPDEVIEACEIGRELIKKAAEELGLQVMLESMHPFESDPLPINGTHINVMVKLKDQPYMTPKQILVVYNWLWHNL
PIIIAATANTPYCCGGKNLAASCRLLKSRVLKPNYYAAIKRLEKRPYLTKTQYYGRLRYRLRLRKDTEFEERVVAHPDGR
RLVDITPRGPASNVTGDENDSPTRNRVEVRVIDNQKSMKYLHDVVMLIVGLSLEALYIYEVEGKLPPNDPNHFDNRREAI
EKGINATFVINGREIDAEDALLKIISRVDKFLEHLGLRFVSPLKNGKVELQERPKLNVEYVHKDVIKYIGNYAEVILGSN
KTVEIKGKRYTIPKGTKVIGKLVPMASYKYRVDNKGFVKDIIKGVVTLGIKRNGVEIPLDESDRIVNVMSELEYLMRSMR
GLL

Sequences:

>Translated_483_residues
MTRLFFRRRSVESFAERIEVKVGVEEELFLIDRDGSLTRAADDVIVKAAELLESDSNLLEDCWRTVLGLDPEPNPAQIEY
LTQPLPPDEVIEACEIGRELIKKAAEELGLQVMLESMHPFESDPLPINGTHINVMVKLKDQPYMTPKQILVVYNWLWHNL
PIIIAATANTPYCCGGKNLAASCRLLKSRVLKPNYYAAIKRLEKRPYLTKTQYYGRLRYRLRLRKDTEFEERVVAHPDGR
RLVDITPRGPASNVTGDENDSPTRNRVEVRVIDNQKSMKYLHDVVMLIVGLSLEALYIYEVEGKLPPNDPNHFDNRREAI
EKGINATFVINGREIDAEDALLKIISRVDKFLEHLGLRFVSPLKNGKVELQERPKLNVEYVHKDVIKYIGNYAEVILGSN
KTVEIKGKRYTIPKGTKVIGKLVPMASYKYRVDNKGFVKDIIKGVVTLGIKRNGVEIPLDESDRIVNVMSELEYLMRSMR
GLL
>Mature_482_residues
TRLFFRRRSVESFAERIEVKVGVEEELFLIDRDGSLTRAADDVIVKAAELLESDSNLLEDCWRTVLGLDPEPNPAQIEYL
TQPLPPDEVIEACEIGRELIKKAAEELGLQVMLESMHPFESDPLPINGTHINVMVKLKDQPYMTPKQILVVYNWLWHNLP
IIIAATANTPYCCGGKNLAASCRLLKSRVLKPNYYAAIKRLEKRPYLTKTQYYGRLRYRLRLRKDTEFEERVVAHPDGRR
LVDITPRGPASNVTGDENDSPTRNRVEVRVIDNQKSMKYLHDVVMLIVGLSLEALYIYEVEGKLPPNDPNHFDNRREAIE
KGINATFVINGREIDAEDALLKIISRVDKFLEHLGLRFVSPLKNGKVELQERPKLNVEYVHKDVIKYIGNYAEVILGSNK
TVEIKGKRYTIPKGTKVIGKLVPMASYKYRVDNKGFVKDIIKGVVTLGIKRNGVEIPLDESDRIVNVMSELEYLMRSMRG
LL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55197; Mature: 55066

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLFFRRRSVESFAERIEVKVGVEEELFLIDRDGSLTRAADDVIVKAAELLESDSNLLE
CCCHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHH
DCWRTVLGLDPEPNPAQIEYLTQPLPPDEVIEACEIGRELIKKAAEELGLQVMLESMHPF
HHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ESDPLPINGTHINVMVKLKDQPYMTPKQILVVYNWLWHNLPIIIAATANTPYCCGGKNLA
CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCHH
ASCRLLKSRVLKPNYYAAIKRLEKRPYLTKTQYYGRLRYRLRLRKDTEFEERVVAHPDGR
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHEEEEEEEECCCCCHHHHEEECCCCC
RLVDITPRGPASNVTGDENDSPTRNRVEVRVIDNQKSMKYLHDVVMLIVGLSLEALYIYE
EEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEEE
VEGKLPPNDPNHFDNRREAIEKGINATFVINGREIDAEDALLKIISRVDKFLEHLGLRFV
ECCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCHHHH
SPLKNGKVELQERPKLNVEYVHKDVIKYIGNYAEVILGSNKTVEIKGKRYTIPKGTKVIG
HHCCCCCEEECCCCCCCHHHHHHHHHHHHCCHHHEEECCCCEEEECCCEEECCCCHHHHH
KLVPMASYKYRVDNKGFVKDIIKGVVTLGIKRNGVEIPLDESDRIVNVMSELEYLMRSMR
HHHCCCCEEEEECCCCHHHHHHHHHHHHCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
GLL
CCC
>Mature Secondary Structure 
TRLFFRRRSVESFAERIEVKVGVEEELFLIDRDGSLTRAADDVIVKAAELLESDSNLLE
CCHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHH
DCWRTVLGLDPEPNPAQIEYLTQPLPPDEVIEACEIGRELIKKAAEELGLQVMLESMHPF
HHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ESDPLPINGTHINVMVKLKDQPYMTPKQILVVYNWLWHNLPIIIAATANTPYCCGGKNLA
CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCHH
ASCRLLKSRVLKPNYYAAIKRLEKRPYLTKTQYYGRLRYRLRLRKDTEFEERVVAHPDGR
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHEEEEEEEECCCCCHHHHEEECCCCC
RLVDITPRGPASNVTGDENDSPTRNRVEVRVIDNQKSMKYLHDVVMLIVGLSLEALYIYE
EEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEEE
VEGKLPPNDPNHFDNRREAIEKGINATFVINGREIDAEDALLKIISRVDKFLEHLGLRFV
ECCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCHHHH
SPLKNGKVELQERPKLNVEYVHKDVIKYIGNYAEVILGSNKTVEIKGKRYTIPKGTKVIG
HHCCCCCEEECCCCCCCHHHHHHHHHHHHCCHHHEEECCCCEEEECCCEEECCCCHHHHH
KLVPMASYKYRVDNKGFVKDIIKGVVTLGIKRNGVEIPLDESDRIVNVMSELEYLMRSMR
HHHCCCCEEEEECCCCHHHHHHHHHHHHCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
GLL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA